def family_from_indiv_id_list(indiv_id_list, project_id, family_id):
indivs = [
Individual({
'project_id': project_id,
'family_id': family_id,
'indiv_id': indiv_id
}) for indiv_id in indiv_id_list
]
family = Family({'project_id': project_id, 'family_id': family_id})
for indiv in indivs:
family.add_individual(indiv)
return family
def get_families_from_individuals(individuals, project_id='.'):
"""
List of families from a set of individuals (matched by family_id)
"""
sorted_individuals = sorted(individuals, key=lambda x: x.family_id)
families = []
for family_id, indivs in itertools.groupby(sorted_individuals,
key=lambda x: x.family_id):
family = Family(family_id, list(indivs), project_id=project_id)
families.append(family)
return families
def family_from_indiv_id_list(indiv_id_list, project_id, family_id):
indivs = [Individual({'project_id': project_id, 'family_id': family_id, 'indiv_id': indiv_id}) for indiv_id in indiv_id_list]
family = Family({'project_id': project_id, 'family_id': family_id})
for indiv in indivs:
family.add_individual(indiv)
return family