Example #1
0
    def test_map_ignores_missing_value(self, missing):
        data = np.array([missing, 'B', 'C'], dtype=object)
        la = LabelArray(data, missing_value=missing)

        def increment_char(c):
            return chr(ord(c) + 1)

        result = la.map(increment_char)
        expected = LabelArray([missing, 'C', 'D'], missing_value=missing)
        assert_equal(result.as_string_array(), expected.as_string_array())
Example #2
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    def test_map_ignores_missing_value(self, missing):
        data = np.array([missing, 'B', 'C'], dtype=object)
        la = LabelArray(data, missing_value=missing)

        def increment_char(c):
            return chr(ord(c) + 1)

        result = la.map(increment_char)
        expected = LabelArray([missing, 'C', 'D'], missing_value=missing)
        assert_equal(result.as_string_array(), expected.as_string_array())
Example #3
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    def test_fortran_contiguous_input(self):

        strs = np.array([['a', 'b', 'c', 'd'],
                         ['a', 'b', 'c', 'd'],
                         ['a', 'b', 'c', 'd']], dtype=object)
        strs_F = strs.T
        self.assertTrue(strs_F.flags.f_contiguous)

        arr = LabelArray(
            strs_F,
            missing_value=None,
            categories=['a', 'b', 'c', 'd', None],
        )
        assert_equal(arr.as_string_array(), strs_F)

        arr = LabelArray(
            strs_F,
            missing_value=None,
        )
        assert_equal(arr.as_string_array(), strs_F)
    def test_fortran_contiguous_input(self):

        strs = np.array(
            [["a", "b", "c", "d"], ["a", "b", "c", "d"], ["a", "b", "c", "d"]],
            dtype=object,
        )
        strs_F = strs.T
        assert strs_F.flags.f_contiguous

        arr = LabelArray(
            strs_F,
            missing_value=None,
            categories=["a", "b", "c", "d", None],
        )
        assert_equal(arr.as_string_array(), strs_F)

        arr = LabelArray(
            strs_F,
            missing_value=None,
        )
        assert_equal(arr.as_string_array(), strs_F)
Example #5
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    def test_map_never_increases_code_storage_size(self):
        # This tests a pathological case where a user maps an impure function
        # that returns a different label on every invocation, which in a naive
        # implementation could cause us to need to **increase** the size of our
        # codes after a map.
        #
        # This doesn't happen, however, because we guarantee that the user's
        # mapping function will be called on each unique category exactly once,
        # which means we can never increase the number of categories in the
        # LabelArray after mapping.

        # Using all but one of the categories so that we still fit in a uint8
        # with an extra category for None as a missing value.
        categories = self.create_categories(8, plus_one=False)[:-1]

        larger_categories = self.create_categories(16, plus_one=False)

        # Double the length of the categories so that we have to increase the
        # required size after our map.
        categories_twice = categories + categories

        arr = LabelArray(categories_twice, missing_value=None)
        assert_equal(arr.itemsize, 1)

        gen_unique_categories = iter(larger_categories)

        def new_string_every_time(c):
            # Return a new unique category every time so that every result is
            # different.
            return next(gen_unique_categories)

        result = arr.map(new_string_every_time)

        # Result should still be of size 1.
        assert_equal(result.itemsize, 1)

        # Result should be the first `len(categories)` entries from the larger
        # categories, repeated twice.
        expected = LabelArray(
            larger_categories[:len(categories)] * 2,
            missing_value=None,
        )
        assert_equal(result.as_string_array(), expected.as_string_array())
Example #6
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    def test_map_never_increases_code_storage_size(self):
        # This tests a pathological case where a user maps an impure function
        # that returns a different label on every invocation, which in a naive
        # implementation could cause us to need to **increase** the size of our
        # codes after a map.
        #
        # This doesn't happen, however, because we guarantee that the user's
        # mapping function will be called on each unique category exactly once,
        # which means we can never increase the number of categories in the
        # LabelArray after mapping.

        # Using all but one of the categories so that we still fit in a uint8
        # with an extra category for None as a missing value.
        categories = self.create_categories(8, plus_one=False)[:-1]

        larger_categories = self.create_categories(16, plus_one=False)

        # Double the length of the categories so that we have to increase the
        # required size after our map.
        categories_twice = categories + categories

        arr = LabelArray(categories_twice, missing_value=None)
        assert_equal(arr.itemsize, 1)

        gen_unique_categories = iter(larger_categories)

        def new_string_every_time(c):
            # Return a new unique category every time so that every result is
            # different.
            return next(gen_unique_categories)

        result = arr.map(new_string_every_time)

        # Result should still be of size 1.
        assert_equal(result.itemsize, 1)

        # Result should be the first `len(categories)` entries from the larger
        # categories, repeated twice.
        expected = LabelArray(
            larger_categories[:len(categories)] * 2,
            missing_value=None,
        )
        assert_equal(result.as_string_array(), expected.as_string_array())
Example #7
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    def test_map_shrinks_code_storage_if_possible(self):
        arr = LabelArray(
            # Drop the last value so we fit in a uint16 with None as a missing
            # value.
            self.create_categories(16, plus_one=False)[:-1],
            missing_value=None,
        )

        self.assertEqual(arr.itemsize, 2)

        def either_A_or_B(s):
            return ('A', 'B')[sum(ord(c) for c in s) % 2]

        result = arr.map(either_A_or_B)

        self.assertEqual(set(result.categories), {'A', 'B', None})
        self.assertEqual(result.itemsize, 1)

        assert_equal(
            np.vectorize(either_A_or_B)(arr.as_string_array()),
            result.as_string_array(),
        )
Example #8
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    def test_map_shrinks_code_storage_if_possible(self):
        arr = LabelArray(
            # Drop the last value so we fit in a uint16 with None as a missing
            # value.
            self.create_categories(16, plus_one=False)[:-1],
            missing_value=None,
        )

        self.assertEqual(arr.itemsize, 2)

        def either_A_or_B(s):
            return ('A', 'B')[sum(ord(c) for c in s) % 2]

        result = arr.map(either_A_or_B)

        self.assertEqual(set(result.categories), {'A', 'B', None})
        self.assertEqual(result.itemsize, 1)

        assert_equal(
            np.vectorize(either_A_or_B)(arr.as_string_array()),
            result.as_string_array(),
        )