# pv.Current_Label = 'O3_5007A'
# pv.Current_Ion = '[OIII]'
# pv.Current_TheoLoc = 5006.843
# pv.Current_Label = 'O2_7319A'
# pv.Current_Ion = '[OII]'
# pv.Current_TheoLoc = 7319.000
#
# pv.Current_Label = 'O2_7330A'
# pv.Current_Ion = '[OII]'
# pv.Current_TheoLoc = 7330.000
pv.Fitting_dict['Wide component'] = False
pv.save_to_file_check = False
pv.Current_LinesLog = '/home/vital/Dropbox/Astrophysics/Data/WHT_Catalogue_SulfurRegression/Objects/SHOC579/' + CodeName + '_WHT_LinesLog_v3.txt'
pv.Selections = pv.RangesR(Selections, pv.Current_TheoLoc, pv.Current_LinesLog)
print 'The selections', pv.Selections
pv.Selections = [6497.6857399999999, 6524.8928889999997, 6541.0, 6593.0, 6593.1912490000004, 6616.0508639999998]
pv.PlottingInLineMeasuring(store_data = False)
print pv.Fitting_dict['blended number']
for i in range(pv.Fitting_dict['blended number']):
index = str(i)
print index, pv.Fitting_dict['A' + index].nominal_value
print index, pv.Fitting_dict['mu' + index].nominal_value
print index, pv.Fitting_dict['sigma' + index].nominal_value
sigma_limits = 4
sigma_small_limit = 2.5
pv.LogTableAddress = FileFolder + LogTableName
#Generate data log if emision lines log (THIS COULD BE AN ISOLATED METHOD)
pv.CleanTableMaker(pv.LogTableAddress, pv.RemakeFiles)
#Defining lines log
pv.Current_LinesLog = FileFolder + LogTableName
# Start to loop through recorded line
for m in range(1, len(TextLines)):
try:
Line = TextLines[m].split()
pv.Current_Label, pv.Current_Ion, pv.Current_TheoLoc = Line[0], Line[1], float(Line[2]),
pv.Wave1, pv.Wave2, pv.Wave3, pv.Wave4, pv.Wave5, pv.Wave6 = float(Line[4]), float(Line[5]), float(Line[6]), float(Line[7]), float(Line[8]), float(Line[9])
pv.Selections = [pv.Wave1, pv.Wave2, pv.Wave3, pv.Wave4, pv.Wave5, pv.Wave6]
Ind_min = np_searchsorted(Wave, pv.Wave1)
Ind_max = np_searchsorted(Wave, pv.Wave6)
SubWave = Wave[Ind_min - 1 : Ind_max + 1]
SubInt = Int[Ind_min - 1 : Ind_max + 1]
pv.ind1, pv.ind2, pv.ind3, pv.ind4, pv.ind5, pv.ind6 = np_searchsorted(SubWave, pv.Wave1), np_searchsorted(SubWave, pv.Wave2), np_searchsorted(SubWave, pv.Wave3), np_searchsorted(SubWave, pv.Wave4), np_searchsorted(SubWave, pv.Wave5), np_searchsorted(SubWave, pv.Wave6)
print '---Emission', pv.Current_Label
#Clear the dictionaries with the line data
pv.Fitting_dict = pv.Fitting_dict.fromkeys(pv.Fitting_dict)
pv.Parameter_dict = pv.Parameter_dict.fromkeys(pv.Parameter_dict)
#Calculation and plotting of continuum properties
pv.LocalMedian, pv.ContinuumFlux, pv.SigmaContinuum, pv.Continuum_Gradient, pv.Continuum_n, WPoint1, Wpoint2, FPoint1, FPoint2 = pv.ContinuumRegions(SubInt, SubWave)
#---------------------------Complete Mode--------------------------------------------------------------------
pv.RemakeFiles = False
pv.Wave = Wave
pv.Int = Int
pv.Current_Code = CodeName
Selections = []
Line_Label = 'N2_6548A'
pv.Current_LinesLog = '/home/vital/Dropbox/Astrophysics/Data/WHT_Catalogue/Objects/51959-092/' + CodeName + '_WHT_LinesLog_v3.txt'
Ion = pv.GetDataInTable('Line_Label',"Ion", Line_Label, pv.Current_LinesLog, pv.TableHeaderSize)
TheoWavelength = pv.GetDataInTable('Line_Label',"TheoWavelength", Line_Label, pv.Current_LinesLog, pv.TableHeaderSize, dataype='float')
pv.Current_Label, pv.Current_Ion, pv.Current_TheoLoc = Line_Label, Ion, TheoWavelength
pv.Selections = pv.RangesR(Selections, pv.Current_TheoLoc, pv.Current_LinesLog)
pv.PlottingInLineMeasuring()
pv.DisplayFigure()
pv = Plots_Manager()
# #---------------------------Simple Mode--------------------------------------------------------------------
# #Load data into the class
# Line_Label = 'O2_3726A'
# Line_Label = 'He1_4472A'
# #["Line_Label", "Ion", "TheoWavelength", "Blended_Set","Wave1", "Wave2", "Wave3", "Wave4", "Wave5", "Wave6"]
# pv.Current_Label, pv.Current_Ion = Line_Label, 'NoImporta'
