def __init__(self):
'''
Reads the NetCDF Dataset
'''
self.filename="/gss/gss_work/DRES_OGS_BiGe/Observations/TIME_RAW_DATA/STATIC/Carbon/Dataset_Med_CarbSys.nc"
self.DataExtractor = DatasetExtractor(self.filename)
# DATA ELIMINATION in order to not duplicate values with nutrients dataset
for cruisename in ['METEOR','METEOR51', 'METEOR95','PROSOPE']:
iCruise = find_index(cruisename, self.DataExtractor.CRUISES)
for var in ['nitrate','phosphate','silicate','oxygen']:
ivar = find_index(var, self.DataExtractor.VARIABLES)
ii = self.DataExtractor.DATA[-1,:] == (iCruise+1)
self.DataExtractor.DATA[ivar,ii] = -999.0
class NutrientsReader():
def __init__(self):
'''
Reads the NetCDF Dataset
'''
self.filename="/gss/gss_work/DRES_OGS_BiGe/Observations/TIME_RAW_DATA/STATIC/Nutrients/Dataset_Med_Nutrients.nc"
self.DataExtractor = DatasetExtractor(self.filename)
def CruiseSelector(self, var,Cruisename):
'''
Returns a profile list by selecting for
variable (string) and
Cruisename (string)
var can be one of these:
- nitrate
- phosphate
- silicate
- oxygen
Cruisename can be one of these
06MT51/2 BIOPT06
CANARI
DYFAMED
DYFAMED/PAPADOC - 99
MEDCIESM
MEDGOOS2 MEDGOOS3 MEDGOOS4 MEDGOOS5
MELISSA 2004
MT84_3
NORBAL NORBAL2 NORBAL3 NORBAL4
POSEIDONE1M3A
PROSOPE
RHOFI 1 RHOFI 2 RHOFI 3
SINAPSI-3 SINAPSI-4
Returns a profile list
'''
return self.DataExtractor.cruiseSelector(var, Cruisename)
def Selector(self,var,T_int, region):
'''
Returns a profile list by selecting for
variable (string),
T_int (TimeInterval object)
region (region object)
can be one of these:
- nitrate
- phosphate
- silicate
- oxygen
if var is None, no selection is done about variable
'''
if var is None:
Profilelist=list()
for myvar in ['nitrate','phosphate','silicate','oxygen']:
sublist=self.DataExtractor.selector(myvar, T_int, region)
for p in sublist:
if not p in Profilelist: Profilelist.append(p)
return Profilelist
else:
return self.DataExtractor.selector(var, T_int, region)
def getAllprofiles(self, T_INT):
Reg = Rectangle(-6,36,30,46)
return self.Selector(None,T_INT, Reg)
def __init__(self):
'''
Reads the NetCDF Dataset
'''
self.filename="/gss/gss_work/DRES_OGS_BiGe/Observations/TIME_RAW_DATA/STATIC/Nutrients/Dataset_Med_Nutrients.nc"
self.DataExtractor = DatasetExtractor(self.filename)
class CarbonReader(DatasetExtractor):
def __init__(self):
'''
Reads the NetCDF Dataset
'''
self.filename="/gss/gss_work/DRES_OGS_BiGe/Observations/TIME_RAW_DATA/STATIC/Carbon/Dataset_Med_CarbSys.nc"
self.DataExtractor = DatasetExtractor(self.filename)
# DATA ELIMINATION in order to not duplicate values with nutrients dataset
for cruisename in ['METEOR','METEOR51', 'METEOR95','PROSOPE']:
iCruise = find_index(cruisename, self.DataExtractor.CRUISES)
for var in ['nitrate','phosphate','silicate','oxygen']:
ivar = find_index(var, self.DataExtractor.VARIABLES)
ii = self.DataExtractor.DATA[-1,:] == (iCruise+1)
self.DataExtractor.DATA[ivar,ii] = -999.0
def CruiseSelector(self, var,Cruisename):
'''
Returns a profile list by selecting for
variable (string) and
Cruisename (string)
var can be one of these:
- DIC
- ALK
- temp
- theta
- salinity
- silicate
- nitrate
- phosphate
- oxygen
- sigma_theta
- density
- sigma_t
- pH25_sws
- pH25_T
Cruisename can be one of these
METEOR METEOR51 METEOR95
BOUM 2008
PROSOPE
EGEO APRIL EGEO SEPT
REGINA MARIS
Garcia del Cid
SESAME - ADRIATICO 2008
CARBOGIB 1 CARBOGIB 2 CARBOGIB 3
CARBOGIB 4 CARBOGIB 5 CARBOGIB 6
GIFT 1 GIFT 2
DYFAMED
Returns a profile list
'''
return self.DataExtractor.cruiseSelector(var, Cruisename)
def Selector(self,var,T_int, region):
'''
Returns a profile list by selecting for
variable (string),
T_int (TimeInterval object)
region (region object)
var can be one of these:
- DIC
- ALK
- temp
- theta
- salinity
- silicate
- nitrate
- phosphate
- oxygen
- sigma_theta
- density
- sigma_t
- pH25_sws
- pH25_T
'''
if var is None:
Profilelist = list()
for myvar in ['nitrate','phosphate','oxygen','silicate','DIC','ALK','temp','salinity','pH25_T']:
Profilelist.extend(self.DataExtractor.selector(myvar, T_int, region))
return Profilelist
return self.DataExtractor.selector(var, T_int, region)
