def __init__(self, _strPluginName=None, _strConfigurationFileName=None, _bUseWSGI=False):
"""
@param _strPluginName: name of control plugin to load
@type _strPluginName: string
@param _strConfigurationFileName: the configuration file to use
@type _strConfigurationFileName: string
"""
EDApplication.__init__(self, _strName=EDApplicationXAFSBatchProcessing.APPLICATION_NAME, \
_strVersion=EDApplicationXAFSBatchProcessing.APPLICATION_VERSION, \
_strPluginName=_strPluginName, \
_strConfigurationFileName=_strConfigurationFileName)
self.__strDatasetFileName = None
self.__strDataInputFilePath = None
self.__strNxsEnergy = '/entry1/counterTimer01/Energy'
self.__strNxsI0 = '/entry1/counterTimer01/I0'
self.__strNxsIref = '/entry1/counterTimer01/Iref'
self.__strNxsIt = '/entry1/counterTimer01/It'
self.__strNxsTime = '/entry1/counterTimer01/Time'
self.__strNxsLnI0Iref = '/entry1/counterTimer01/lnI0Iref'
self.__strNxsLnI0It = '/entry1/counterTimer01/lnI0It'
self.__strNxsScanIndex = '/entry1/entry_identifier'
self.__fRbkg = 1.0
self.__fftfKmin = 2.0
self.__fftfKmax = 17.0
self.__fftfDk = 1.0
self.__fftfKweight = 2.0
self.__bProcess = True
self.__bUseWSGI = _bUseWSGI
self.__edPlugin = None
def __init__(self,
_strPluginName=None,
_strConfigurationFileName=None,
_ccp4DataInputControlPipelineCalcDiffMap=None):
"""
@param _strPluginName: name of control plugin to load
@type _strPluginName: string
@param _strConfigurationFileName: the configuration file to use
@type _strConfigurationFileName: string
@param _ccp4DataInputControlPipelineCalcDiffMap: the input object to use
@type _ccp4DataInputControlPipelineCalcDiffMap: CCP4DataInputControlPipelineCalcDiffMap
"""
EDApplication.__init__(self, _strName=EDApplicationDimplev0.APPLICATION_NAME, \
_strVersion=EDApplicationDimplev0.APPLICATION_VERSION, \
_strPluginName=_strPluginName, \
_strConfigurationFileName=_strConfigurationFileName)
self.colLabelI = None
self.colLabelSIGI = None
self.strPDBIn = None
self.strPDBOut = None
self.strMTZIn = None
self.strMTZOut = None
self.inputXMLFile = None
self.inputXMLFileName = None
self.ccp4DataInputControlPipelineCalcDiffMap = _ccp4DataInputControlPipelineCalcDiffMap
self.strPluginName = _strPluginName
self.strDatasetFileName = None
self.xsDataOutput = None
def __init__(self, _strPluginName=None, _strConfigurationFileName=None, _ccp4DataInputControlPipelineCalcDiffMap=None):
"""
@param _strPluginName: name of control plugin to load
@type _strPluginName: string
@param _strConfigurationFileName: the configuration file to use
@type _strConfigurationFileName: string
@param _ccp4DataInputControlPipelineCalcDiffMap: the input object to use
@type _ccp4DataInputControlPipelineCalcDiffMap: CCP4DataInputControlPipelineCalcDiffMap
"""
EDApplication.__init__(self, _strName=EDApplicationDimplev0.APPLICATION_NAME, \
_strVersion=EDApplicationDimplev0.APPLICATION_VERSION, \
_strPluginName=_strPluginName, \
_strConfigurationFileName=_strConfigurationFileName)
self.colLabelI = None
self.colLabelSIGI = None
self.strPDBIn = None
self.strPDBOut = None
self.strMTZIn = None
self.strMTZOut = None
self.inputXMLFile = None
self.inputXMLFileName = None
self.ccp4DataInputControlPipelineCalcDiffMap = _ccp4DataInputControlPipelineCalcDiffMap
self.strPluginName = _strPluginName
self.strDatasetFileName = None
self.xsDataOutput = None
def __init__(self, _strPluginName=None, _strConfigurationFileName=None):
"""
@param _strPluginName: name of control plugin to load
@type _strPluginName: string
@param _strConfigurationFileName: the configuration file to use
@type _strConfigurationFileName: string
"""
EDApplication.__init__(self, _strName=EDApplicationSASPipeline.APPLICATION_NAME, \
_strVersion=EDApplicationSASPipeline.APPLICATION_VERSION, \
_strPluginName=_strPluginName, \
_strConfigurationFileName=_strConfigurationFileName)
self.__strDatasetFileName = None
self.__strNxsQ = None
self.__strNxsData = None
self.__strDatasetFileName = None
self.__bProcess = True
self.__strPluginName = None
self.__strDataInputFilePath = None
self.__fRMaxStart = 10.0
self.__fRMaxStop = 200.0
self.__iRMaxIntervals = 10
self.__fRMaxAbsTol = 0.1
self.__strMode = "Fast"
self.__strSymmetry = "P1"
self.__bOnlyGnom = False
self.__bPlotFit = False
self.__iThreads = None
self.__iUnit = 1
self.__iColumns = 1
self.__fQMin = None
self.__fQMax = None
def __init__(self,
_strPluginName=None,
_strConfigurationFileName=None,
_xsDataInputCharacterisation=None,
_strComments=None,
_strShortComments=None):
"""
@param _strPluginName: name of control plugin to load
@type _strPluginName: string
@param _strConfigurationFileName: the configuration file to use
@type _strConfigurationFileName: string
@param _xsDataInputCharacterisation: the input characterisation object to use
@type _xsDataInputCharacterisation: XSDataInputCharacterisation
"""
EDApplication.__init__(self, _strName=EDApplicationMXv1Characterisation.APPLICATION_NAME, \
_strVersion=EDApplicationMXv1Characterisation.APPLICATION_VERSION, \
_strPluginName=_strPluginName, \
_strConfigurationFileName=_strConfigurationFileName)
self.__listImagePaths = None
self.__strDatasetFileName = None
self.__fFlux = None
self.__fMaxExposureTimePerDataCollection = 10000 # s, default MXv1 value
self.__fMinExposureTimePerImage = None
self.__fBeamSize = None
self.__bTemplateMode = False
self.__strGeneratedTemplateFile = None
self.__strComplexity = "none"
self.__strResultsFilePath = None
self.__strForcedSpaceGroup = None
self.__bAnomalousData = False
self.__fBeamPosX = None
self.__fBeamPosY = None
self.__strStrategyOption = None
self.__fDoseLimit = None
self.__fAimedResolution = None
self.__fAimedCompleteness = None
self.__fAimedMultiplicity = None
self.__bProcess = True
self.__iDataCollectionId = None
self.__xsDataInputCharacterisation = _xsDataInputCharacterisation
self.__strPluginName = None
self.__strDataInputFilePath = None
self.__strShortComments = _strShortComments
self.__strComments = _strComments
self.__fTransmission = None
def __init__(self, _strPluginName=None, _strConfigurationFileName=None, _xsDataInputCharacterisation=None, _strComments = None, _strShortComments = None):
"""
@param _strPluginName: name of control plugin to load
@type _strPluginName: string
@param _strConfigurationFileName: the configuration file to use
@type _strConfigurationFileName: string
@param _xsDataInputCharacterisation: the input characterisation object to use
@type _xsDataInputCharacterisation: XSDataInputCharacterisation
"""
EDApplication.__init__(self, _strName=EDApplicationMXv1Characterisation.APPLICATION_NAME, \
_strVersion=EDApplicationMXv1Characterisation.APPLICATION_VERSION, \
_strPluginName=_strPluginName, \
_strConfigurationFileName=_strConfigurationFileName)
self.__listImagePaths = None
self.__strDatasetFileName = None
self.__fFlux = None
self.__fMaxExposureTimePerDataCollection = 10000 # s, default MXv1 value
self.__fMinExposureTimePerImage = None
self.__fBeamSize = None
self.__bTemplateMode = False
self.__strGeneratedTemplateFile = None
self.__strComplexity = "none"
self.__strResultsFilePath = None
self.__strForcedSpaceGroup = None
self.__bAnomalousData = False
self.__fBeamPosX = None
self.__fBeamPosY = None
self.__strStrategyOption = None
self.__bProcess = True
self.__iDataCollectionId = None
self.__xsDataInputCharacterisation = _xsDataInputCharacterisation
self.__strPluginName = None
self.__strDataInputFilePath = None
self.__strShortComments = _strShortComments
self.__strComments = _strComments
self.__fTransmission = None
def __init__ (self):
EDApplication.__init__(self)
self.__edTestCase = None
EDVerbose.setTestOn()
