def configure_string_option(parent=None, message=None, option=None, bias='user', default_value='', validator=None):
dbcfg = gmCfg.cCfgSQL()
current_value = dbcfg.get2 (
option = option,
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias = bias,
default = default_value
)
if current_value is not None:
current_value = '%s' % current_value
if parent is None:
parent = wx.GetApp().GetTopWindow()
if validator is None:
validator = lambda in_val: (True, in_val)
while True:
dlg = wx.TextEntryDialog (
parent,
message,
caption = _('Configuration'),
value = gmTools.coalesce(current_value, ''),
style = wx.OK | wx.CANCEL | wx.CENTRE
)
result = dlg.ShowModal()
if result == wx.ID_CANCEL:
dlg.DestroyLater()
return None
user_val = dlg.GetValue().strip()
dlg.DestroyLater()
if user_val == current_value:
return user_val
validated, user_val = validator(user_val)
if validated:
break
gmDispatcher.send (
signal = 'statustext',
msg = _('Value [%s] not valid for option <%s>.') % (user_val, option),
beep = True
)
dbcfg = gmCfg.cCfgSQL()
dbcfg.set (
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace,
option = option,
value = user_val
)
return user_val
def configure_string_from_list_option(parent=None,
message=None,
option=None,
bias='user',
default_value='',
choices=None,
columns=None,
data=None,
caption=None):
dbcfg = gmCfg.cCfgSQL()
current_value = dbcfg.get2(
option=option,
workplace=gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias=bias,
default=default_value)
if parent is None:
parent = wx.GetApp().GetTopWindow()
if caption is None:
caption = _('Configuration')
selections = None
if current_value is not None:
try:
selections = [choices.index(current_value)]
except ValueError:
pass
choice = gmListWidgets.get_choices_from_list(parent=parent,
msg=message,
caption=caption,
choices=choices,
columns=columns,
data=data,
selections=selections,
single_selection=True,
can_return_empty=False)
# aborted
if choice is None:
return
# same value selected again
if choice == current_value:
return
dbcfg = gmCfg.cCfgSQL()
dbcfg.set(workplace=gmPraxis.gmCurrentPraxisBranch().active_workplace,
option=option,
value=choice)
return
def configure_string_option(parent=None, message=None, option=None, bias='user', default_value='', validator=None):
dbcfg = gmCfg.cCfgSQL()
current_value = dbcfg.get2 (
option = option,
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias = bias,
default = default_value
)
if current_value is not None:
current_value = '%s' % current_value
if parent is None:
parent = wx.GetApp().GetTopWindow()
while True:
dlg = wx.TextEntryDialog (
parent,
message,
caption = _('Configuration'),
value = gmTools.coalesce(current_value, ''),
style = wx.OK | wx.CANCEL | wx.CENTRE
)
result = dlg.ShowModal()
if result == wx.ID_CANCEL:
dlg.DestroyLater()
return None
user_val = dlg.GetValue().strip()
dlg.DestroyLater()
if user_val == current_value:
return user_val
validated, user_val = validator(user_val)
if validated:
break
gmDispatcher.send (
signal = 'statustext',
msg = _('Value [%s] not valid for option <%s>.') % (user_val, option),
beep = True
)
dbcfg = gmCfg.cCfgSQL()
dbcfg.set (
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace,
option = option,
value = user_val
)
return user_val
def configure_string_from_list_option(parent=None, message=None, option=None, bias='user', default_value='', choices=None, columns=None, data=None, caption=None):
dbcfg = gmCfg.cCfgSQL()
current_value = dbcfg.get2 (
option = option,
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias = bias,
default = default_value
)
if parent is None:
parent = wx.GetApp().GetTopWindow()
if caption is None:
caption = _('Configuration')
selections = None
if current_value is not None:
try:
selections = [choices.index(current_value)]
except ValueError:
pass
choice = gmListWidgets.get_choices_from_list (
parent = parent,
msg = message,
caption = caption,
choices = choices,
columns = columns,
data = data,
selections = selections,
single_selection = True,
can_return_empty = False
)
# aborted
if choice is None:
return
# same value selected again
if choice == current_value:
return
dbcfg = gmCfg.cCfgSQL()
dbcfg.set (
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace,
option = option,
value = choice
)
return
def clone(workplace=None):
if workplace is None:
return False
new_name = wx.GetTextFromUser (
message = _('Enter a name for the new workplace !'),
caption = _('Cloning workplace'),
default_value = '%s-2' % workplace,
parent = parent
).strip()
if new_name == '':
return False
dbcfg = gmCfg.cCfgSQL()
opt = 'horstspace.notebook.plugin_load_order'
plugins = dbcfg.get2 (
option = opt,
workplace = workplace,
bias = 'workplace'
)
dbcfg.set (
option = opt,
value = plugins,
workplace = new_name
)
# FIXME: clone cfg, too
return True
def _check_birthday(patient=None):
if patient['dob'] is None:
return
dbcfg = gmCfg.cCfgSQL()
dob_distance = dbcfg.get2 (
option = 'patient_search.dob_warn_interval',
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias = 'user',
default = '1 week'
)
if not patient.dob_in_range(dob_distance, dob_distance):
return
now = gmDateTime.pydt_now_here()
enc = gmI18N.get_encoding()
msg = _('%(pat)s turns %(age)s on %(month)s %(day)s ! (today is %(month_now)s %(day_now)s)') % {
'pat': patient.get_description_gender(),
'age': patient.get_medical_age().strip('y'),
'month': patient.get_formatted_dob(format = '%B'),
'day': patient.get_formatted_dob(format = '%d'),
'month_now': gmDateTime.pydt_strftime(now, '%B', gmDateTime.acc_months),
'day_now': gmDateTime.pydt_strftime(now, '%d', gmDateTime.acc_days)
}
gmDispatcher.send(signal = 'statustext', msg = msg)
def __on_add_unassociated(self, evt): """Add new editor for as-yet unassociated progress note. Clinical logic as per discussion with Jim Busser: - if patient has no episodes: - new patient - always allow several NEWs - if patient has episodes: - allow several NEWs per configuration """ emr = self.__pat.emr epis = emr.get_episodes() if len(epis) == 0: value = True else: dbcfg = gmCfg.cCfgSQL() value = bool(dbcfg.get2 ( option = 'horstspace.soap_editor.allow_same_episode_multiple_times', workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace, bias = 'user', default = False )) self.__soap_notebook.add_editor(allow_same_problem = value)
def delete(item):
delete_it = gmGuiHelpers.gm_show_question (
aTitle = _('Deleting option'),
aMessage = '%s\n\n%s %s (#%s) %s\n\n%s\n\n%s' % (
tooltip(item),
gmTools.u_box_horiz_single * 3,
item['option'],
item['pk_cfg_item'],
gmTools.u_box_horiz_single * 3,
_('Do you really want to delete this option ?'),
_('(GNUmed will re-create options as needed.)')
)
)
if not delete_it:
return False
from Gnumed.wxpython.gmAuthWidgets import get_dbowner_connection
conn = get_dbowner_connection(procedure = _('Deleting option'))
if conn is None:
gmDispatcher.send(signal = 'statustext', msg = _('Cannot connect as database owner. Unable to delete option.'))
return False
cfg = gmCfg.cCfgSQL()
cfg.delete(conn = conn, pk_option = item['pk_cfg_item'])
return True
def check_for_updates():
dbcfg = gmCfg.cCfgSQL()
url = dbcfg.get2 (
option = u'horstspace.update.url',
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias = 'workplace',
default = u'http://www.gnumed.de/downloads/gnumed-versions.txt'
)
consider_latest_branch = bool(dbcfg.get2 (
option = u'horstspace.update.consider_latest_branch',
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias = 'workplace',
default = True
))
_cfg = gmCfg2.gmCfgData()
found, msg = gmNetworkTools.check_for_update (
url = url,
current_branch = _cfg.get(option = 'client_branch'),
current_version = _cfg.get(option = 'client_version'),
consider_latest_branch = consider_latest_branch
)
if found is False:
gmDispatcher.send(signal = 'statustext', msg = _('Your client (%s) is up to date.') % _cfg.get(option = 'client_version'))
return
gmGuiHelpers.gm_show_info (
msg,
_('Checking for client updates')
)
def _on_problem_activated(self, event):
"""Open progress note editor for this problem.
"""
problem = self._LCTRL_active_problems.get_selected_item_data(only_one = True)
if problem is None:
return True
dbcfg = gmCfg.cCfgSQL()
allow_duplicate_editors = bool(dbcfg.get2 (
option = 'horstspace.soap_editor.allow_same_episode_multiple_times',
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias = 'user',
default = False
))
if self._PNL_editors.add_editor(problem = problem, allow_same_problem = allow_duplicate_editors):
return True
gmGuiHelpers.gm_show_error (
aMessage = _(
'Cannot open progress note editor for\n\n'
'[%s].\n\n'
) % problem['problem'],
aTitle = _('opening progress note editor')
)
return False
def __on_add_unassociated(self, evt):
"""Add new editor for as-yet unassociated progress note.
Clinical logic as per discussion with Jim Busser:
- if patient has no episodes:
- new patient
- always allow several NEWs
- if patient has episodes:
- allow several NEWs per configuration
"""
emr = self.__pat.emr
epis = emr.get_episodes()
if len(epis) == 0:
value = True
else:
dbcfg = gmCfg.cCfgSQL()
value = bool(
dbcfg.get2(
option=
'horstspace.soap_editor.allow_same_episode_multiple_times',
workplace=gmPraxis.gmCurrentPraxisBranch(
).active_workplace,
bias='user',
default=False))
self.__soap_notebook.add_editor(allow_same_problem=value)
def __get_lab_panel(self):
# get panel to use
dbcfg = gmCfg.cCfgSQL()
pk_panel = dbcfg.get2(
option=u'horstspace.top_panel.lab_panel',
workplace=gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias='user')
if pk_panel is None:
return None
try:
panel = gmPathLab.cTestPanel(aPK_obj=pk_panel)
except gmExceptions.ConstructorError:
_log.exception('cannot load configured test panel')
panel = None
if panel is not None:
return panel
_log.error(
'Cannot load test panel [#%s] configured for patient pane (horstspace.top_panel.lab_panel).',
pk_panel)
gmGuiHelpers.gm_show_error(
title=_('GNUmed startup'),
error=_('Cannot load test panel [#%s] configured\n'
'for the top pane with option\n'
'\n'
' <horstspace.top_panel.lab_panel>\n'
'\n'
'Please reconfigure.') % pk_panel)
return None
def _check_birthday(patient=None):
if patient['dob'] is None:
return
dbcfg = gmCfg.cCfgSQL()
dob_distance = dbcfg.get2 (
option = 'patient_search.dob_warn_interval',
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias = 'user',
default = '1 week'
)
if not patient.dob_in_range(dob_distance, dob_distance):
return
now = gmDateTime.pydt_now_here()
msg = _('%(pat)s turns %(age)s on %(month)s %(day)s ! (today is %(month_now)s %(day_now)s)') % {
'pat': patient.get_description_gender(),
'age': patient.get_medical_age(at_date = patient.birthday_this_year).strip('y'),
'month': patient.get_formatted_dob(format = '%B'),
'day': patient.get_formatted_dob(format = '%d'),
'month_now': gmDateTime.pydt_strftime(now, '%B', gmDateTime.acc_months),
'day_now': gmDateTime.pydt_strftime(now, '%d', gmDateTime.acc_days)
}
gmDispatcher.send(signal = 'statustext', msg = msg)
def __init__ (self, *args, **kwargs): cPersonSearchCtrl.__init__(self, *args, **kwargs) # get configuration cfg = gmCfg.cCfgSQL() self.__always_dismiss_on_search = bool ( cfg.get2 ( option = 'patient_search.always_dismiss_previous_patient', workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace, bias = 'user', default = 0 ) ) self.__always_reload_after_search = bool ( cfg.get2 ( option = 'patient_search.always_reload_new_patient', workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace, bias = 'user', default = 0 ) ) self.__register_events()
def clone(workplace=None):
if workplace is None:
return False
new_name = wx.GetTextFromUser (
message = _('Enter a name for the new workplace !'),
caption = _('Cloning workplace'),
default_value = u'%s-2' % workplace,
parent = parent
).strip()
if new_name == u'':
return False
dbcfg = gmCfg.cCfgSQL()
opt = u'horstspace.notebook.plugin_load_order'
plugins = dbcfg.get2 (
option = opt,
workplace = workplace,
bias = 'workplace'
)
dbcfg.set (
option = opt,
value = plugins,
workplace = new_name
)
# FIXME: clone cfg, too
return True
def __init__(self, *args, **kwargs): try: self.problem = kwargs['problem'] del kwargs['problem'] except KeyError: self.problem = None wxgProgressNotesEAPnl.wxgProgressNotesEAPnl.__init__(self, *args, **kwargs) dbcfg = gmCfg.cCfgSQL() self.__use_soap_fields = bool(dbcfg.get2 ( option = 'horstspace.soap_editor.use_one_field_per_soap_category', workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace, bias = 'user', default = True )) self.__soap_fields = [ self._TCTRL_Soap, self._TCTRL_sOap, self._TCTRL_soAp, self._TCTRL_soaP ] self.__init_ui() self.__register_interests() return
def __init__ (self, *args, **kwargs): cPersonSearchCtrl.__init__(self, *args, **kwargs) # get configuration cfg = gmCfg.cCfgSQL() self.__always_dismiss_on_search = bool ( cfg.get2 ( option = 'patient_search.always_dismiss_previous_patient', workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace, bias = 'user', default = 0 ) ) self.__always_reload_after_search = bool ( cfg.get2 ( option = 'patient_search.always_reload_new_patient', workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace, bias = 'user', default = 0 ) ) self.__register_events()
def _on_problem_activated(self, event):
"""Open progress note editor for this problem.
"""
problem = self._LCTRL_active_problems.get_selected_item_data(only_one = True)
if problem is None:
return True
dbcfg = gmCfg.cCfgSQL()
allow_duplicate_editors = bool(dbcfg.get2 (
option = 'horstspace.soap_editor.allow_same_episode_multiple_times',
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias = 'user',
default = False
))
if self._PNL_editors.add_editor(problem = problem, allow_same_problem = allow_duplicate_editors):
return True
gmGuiHelpers.gm_show_error (
aMessage = _(
'Cannot open progress note editor for\n\n'
'[%s].\n\n'
) % problem['problem'],
aTitle = _('opening progress note editor')
)
return False
def __init_ui(self):
cfg = gmCfg2.gmCfgData()
if cfg.get(option='slave'):
self._TCTRL_patient_selector.SetEditable(0)
self._TCTRL_patient_selector.SetToolTip(None)
if sys.platform == 'darwin':
_log.debug('adjusting font size on Mac for top panel parts')
for ctrl in [
self._TCTRL_patient_selector, self._LBL_age,
self._LBL_allergies, self._TCTRL_allergies
]:
curr_font = ctrl.GetFont()
mac_font = wx.Font(curr_font.GetNativeFontInfo())
mac_font.SetPointSize(pointSize=int(curr_font.GetPointSize() /
0.8))
ctrl.SetFont(mac_font)
# get panel to use
dbcfg = gmCfg.cCfgSQL()
pk_panel = dbcfg.get2(
option='horstspace.top_panel.lab_panel',
workplace=gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias='user')
if pk_panel is None:
self.__lab_panel = None
else:
self.__lab_panel = gmPathLab.cTestPanel(aPK_obj=pk_panel)
def __init_ui(self):
cfg = gmCfg2.gmCfgData()
if cfg.get(option = 'slave'):
self._TCTRL_patient_selector.SetEditable(0)
self._TCTRL_patient_selector.SetToolTip(None)
if sys.platform == u'darwin':
_log.debug('adjusting font size on Mac for top panel parts')
for ctrl in [self._TCTRL_patient_selector, self._LBL_age, self._LBL_allergies, self._TCTRL_allergies]:
curr_font = ctrl.GetFont()
mac_font = wx.FontFromNativeInfo(curr_font.NativeFontInfo)
mac_font.SetPointSize(pointSize = int(curr_font.GetPointSize() / 0.8))
ctrl.SetFont(mac_font)
# get panel to use
dbcfg = gmCfg.cCfgSQL()
pk_panel = dbcfg.get2 (
option = u'horstspace.top_panel.lab_panel',
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias = 'user'
)
if pk_panel is None:
self.__lab_panel = None
else:
self.__lab_panel = gmPathLab.cTestPanel(aPK_obj = pk_panel)
def _get_update_status(): dbcfg = gmCfg.cCfgSQL() url = dbcfg.get2 ( option = 'horstspace.update.url', workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace, bias = 'workplace', default = 'http://www.gnumed.de/downloads/gnumed-versions.txt' ) consider_latest_branch = bool(dbcfg.get2 ( option = 'horstspace.update.consider_latest_branch', workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace, bias = 'workplace', default = True )) _cfg = gmCfg2.gmCfgData() update_found, msg = gmNetworkTools.check_for_update ( url = url, current_branch = _cfg.get(option = 'client_branch'), current_version = _cfg.get(option = 'client_version'), consider_latest_branch = consider_latest_branch ) return update_found, msg
def _on_post_patient_selection(self, **kwargs):
db_cfg = gmCfg.cCfgSQL()
default_plugin = db_cfg.get2(
option='patient_search.plugin_to_raise_after_search',
workplace=gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias='user',
default='gmPatientOverviewPlugin')
gmDispatcher.send(signal='display_widget', name=default_plugin)
def edit_old(workplace=None):
available_plugins = gmPlugin.get_installed_plugins(plugin_dir='gui')
dbcfg = gmCfg.cCfgSQL()
if workplace is None:
dlg = wx.TextEntryDialog(
parent=parent,
message=_('Enter a descriptive name for the new workplace:'),
caption=_('Configuring GNUmed workplaces ...'),
defaultValue=u'',
style=wx.OK | wx.CENTRE)
dlg.ShowModal()
workplace = dlg.GetValue().strip()
if workplace == u'':
gmGuiHelpers.gm_show_error(
_('Cannot save a new workplace without a name.'),
_('Configuring GNUmed workplaces ...'))
return False
curr_plugins = []
choices = available_plugins
else:
curr_plugins = gmTools.coalesce(
dbcfg.get2(option=u'horstspace.notebook.plugin_load_order',
workplace=workplace,
bias='workplace'), [])
choices = curr_plugins[:]
for p in available_plugins:
if p not in choices:
choices.append(p)
sels = range(len(curr_plugins))
new_plugins = gmListWidgets.get_choices_from_list(
parent=parent,
msg=_('\n'
'Select the plugin(s) to be loaded the next time\n'
'the client is restarted under the workplace:\n'
'\n'
' [%s]'
'\n') % workplace,
caption=_('Configuring GNUmed workplaces ...'),
choices=choices,
selections=sels,
columns=[_('Plugins')],
single_selection=False)
if new_plugins == curr_plugins:
return True
if new_plugins is None:
return True
dbcfg.set(option=u'horstspace.notebook.plugin_load_order',
value=new_plugins,
workplace=workplace)
return True
def create_new_person(parent=None, activate=False):
if parent is None:
parent = wx.GetApp().GetTopWindow()
if activate: # meaning we will switch away from the current patient if any
msg = _('Before creating a new person review the encounter details\n'
'of the patient you just worked on:\n')
gmEncounterWidgets.sanity_check_encounter_of_active_patient(
parent=parent, msg=msg)
msg = _(
'Edit the current encounter of the patient you are ABOUT TO LEAVE:'
)
dbcfg = gmCfg.cCfgSQL()
def_region = dbcfg.get2(
option='person.create.default_region',
workplace=gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias='user')
def_country = None
if def_region is None:
def_country = dbcfg.get2(
option='person.create.default_country',
workplace=gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias='user')
else:
countries = gmDemographicRecord.get_country_for_region(
region=def_region)
if len(countries) == 1:
def_country = countries[0]['code_country']
ea = cNewPatientEAPnl(parent, -1, country=def_country, region=def_region)
dlg = gmEditArea.cGenericEditAreaDlg2(parent,
-1,
edit_area=ea,
single_entry=True)
dlg.SetTitle(_('Adding new person'))
ea._PRW_lastname.SetFocus()
result = dlg.ShowModal()
pat = ea.data
dlg.Destroy()
if result != wx.ID_OK:
return False
_log.debug('created new person [%s]', pat.ID)
if activate:
from Gnumed.wxpython import gmPatSearchWidgets
gmPatSearchWidgets.set_active_patient(patient=pat)
gmDispatcher.send(signal='display_widget',
name='gmNotebookedPatientEditionPlugin')
return True
def _on_post_patient_selection(self, **kwargs): db_cfg = gmCfg.cCfgSQL() default_plugin = db_cfg.get2 ( option = u'patient_search.plugin_to_raise_after_search', workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace, bias = u'user', default = u'gmPatientOverviewPlugin' ) gmDispatcher.send(signal = 'display_widget', name = default_plugin)
def _on_char(self, evt): """True: patient was selected. False: no patient was selected. """ keycode = evt.GetKeyCode() # list of previously active patients if keycode == wx.WXK_DOWN: evt.Skip() if len(self.__prev_idents) == 0: return False dlg = cSelectPersonFromListDlg(wx.GetTopLevelParent(self), -1) dlg.set_persons(persons = self.__prev_idents) result = dlg.ShowModal() if result == wx.ID_OK: wx.BeginBusyCursor() self.person = dlg.get_selected_person() dlg.DestroyLater() wx.EndBusyCursor() return True dlg.DestroyLater() return False # recall previous search fragment if keycode == wx.WXK_UP: evt.Skip() # FIXME: cycling through previous fragments if self._prev_search_term is not None: self.SetValue(self._prev_search_term) return False # invoke external patient sources if keycode == wx.WXK_F2: evt.Skip() dbcfg = gmCfg.cCfgSQL() search_immediately = bool(dbcfg.get2 ( option = 'patient_search.external_sources.immediately_search_if_single_source', workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace, bias = 'user', default = 0 )) p = get_person_from_external_sources ( parent = wx.GetTopLevelParent(self), search_immediately = search_immediately ) if p is not None: self.person = p return True return False # FIXME: invoke add new person # FIXME: add popup menu apart from system one evt.Skip()
def _on_char(self, evt): """True: patient was selected. False: no patient was selected. """ keycode = evt.GetKeyCode() # list of previously active patients if keycode == wx.WXK_DOWN: evt.Skip() if len(self.__prev_idents) == 0: return False dlg = cSelectPersonFromListDlg(wx.GetTopLevelParent(self), -1) dlg.set_persons(persons = self.__prev_idents) result = dlg.ShowModal() if result == wx.ID_OK: wx.BeginBusyCursor() self.person = dlg.get_selected_person() dlg.DestroyLater() wx.EndBusyCursor() return True dlg.DestroyLater() return False # recall previous search fragment if keycode == wx.WXK_UP: evt.Skip() # FIXME: cycling through previous fragments if self._prev_search_term is not None: self.SetValue(self._prev_search_term) return False # invoke external patient sources if keycode == wx.WXK_F2: evt.Skip() dbcfg = gmCfg.cCfgSQL() search_immediately = bool(dbcfg.get2 ( option = 'patient_search.external_sources.immediately_search_if_single_source', workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace, bias = 'user', default = 0 )) p = get_person_from_external_sources ( parent = wx.GetTopLevelParent(self), search_immediately = search_immediately ) if p is not None: self.person = p return True return False # FIXME: invoke add new person # FIXME: add popup menu apart from system one evt.Skip()
def __init__(self, aUser=None, aWorkplace='xxxDEFAULTxxx'):
""" Init DB connection"""
ConfigData.__init__(self, "DB")
# connect to config database
if ConfigDataDB._dbcfg is None:
ConfigDataDB._dbcfg = gmCfg.cCfgSQL()
self.mUser = aUser
self.mWorkplace = aWorkplace
def __init__(self, aUser = None, aWorkplace = 'xxxDEFAULTxxx'): """ Init DB connection""" ConfigData.__init__(self,"DB") # connect to config database if ConfigDataDB._dbcfg is None: ConfigDataDB._dbcfg = gmCfg.cCfgSQL() self.mUser = aUser self.mWorkplace = aWorkplace
def browse2schedules(vaccination=None): dbcfg = gmCfg.cCfgSQL() url = dbcfg.get2 ( option = 'external.urls.vaccination_plans', workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace, bias = 'user', default = gmVaccination.URL_vaccination_plan ) gmNetworkTools.open_url_in_browser(url = url) return False
def browse2schedules(vaccination=None): dbcfg = gmCfg.cCfgSQL() url = dbcfg.get2 ( option = 'external.urls.vaccination_plans', workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace, bias = 'user', default = u'http://www.bundesaerztekammer.de/downloads/STIKOEmpf2011.pdf' ) gmNetworkTools.open_url_in_browser(url = url) return False
def browse2schedules(vaccination=None): dbcfg = gmCfg.cCfgSQL() url = dbcfg.get2 ( option = 'external.urls.vaccination_plans', workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace, bias = 'user', default = gmVaccination.URL_vaccination_plan ) gmNetworkTools.open_url_in_browser(url = url) return False
def create_new_person(parent=None, activate=False):
if parent is None:
parent = wx.GetApp().GetTopWindow()
if activate: # meaning we will switch away from the current patient if any
msg = _(
'Before creating a new person review the encounter details\n'
'of the patient you just worked on:\n'
)
gmEncounterWidgets.sanity_check_encounter_of_active_patient(parent = parent, msg = msg)
msg = _('Edit the current encounter of the patient you are ABOUT TO LEAVE:')
dbcfg = gmCfg.cCfgSQL()
def_region = dbcfg.get2 (
option = 'person.create.default_region',
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias = 'user'
)
def_country = None
if def_region is None:
def_country = dbcfg.get2 (
option = 'person.create.default_country',
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias = 'user'
)
else:
countries = gmDemographicRecord.get_country_for_region(region = def_region)
if len(countries) == 1:
def_country = countries[0]['code_country']
ea = cNewPatientEAPnl(parent, -1, country = def_country, region = def_region)
dlg = gmEditArea.cGenericEditAreaDlg2(parent, -1, edit_area = ea, single_entry = True)
dlg.SetTitle(_('Adding new person'))
ea._PRW_lastname.SetFocus()
result = dlg.ShowModal()
pat = ea.data
dlg.DestroyLater()
if result != wx.ID_OK:
return False
_log.debug('created new person [%s]', pat.ID)
if activate:
from Gnumed.wxpython import gmPatSearchWidgets
gmPatSearchWidgets.set_active_patient(patient = pat)
gmDispatcher.send(signal = 'display_widget', name = 'gmNotebookedPatientEditionPlugin')
return True
def edit(workplace=None):
dbcfg = gmCfg.cCfgSQL()
if workplace is None:
dlg = wx.TextEntryDialog(
parent=parent,
message=_('Enter a descriptive name for the new workplace:'),
caption=_('Configuring GNUmed workplaces ...'),
defaultValue=u'',
style=wx.OK | wx.CENTRE)
dlg.ShowModal()
workplace = dlg.GetValue().strip()
if workplace == u'':
gmGuiHelpers.gm_show_error(
_('Cannot save a new workplace without a name.'),
_('Configuring GNUmed workplaces ...'))
return False
curr_plugins = []
else:
curr_plugins = gmTools.coalesce(
dbcfg.get2(option=u'horstspace.notebook.plugin_load_order',
workplace=workplace,
bias='workplace'), [])
msg = _(
'Pick the plugin(s) to be loaded the next time the client is restarted under the workplace:\n'
'\n'
' [%s]\n') % workplace
picker = gmListWidgets.cItemPickerDlg(
parent, -1, title=_('Configuring workplace plugins ...'), msg=msg)
picker.set_columns(['Available plugins'], ['Active plugins'])
available_plugins = gmPlugin.get_installed_plugins(plugin_dir='gui')
picker.set_choices(available_plugins)
picker.set_picks(picks=curr_plugins[:])
btn_pressed = picker.ShowModal()
if btn_pressed != wx.ID_OK:
picker.Destroy()
return False
new_plugins = picker.get_picks()
picker.Destroy()
if new_plugins == curr_plugins:
return True
if new_plugins is None:
return True
dbcfg.set(option=u'horstspace.notebook.plugin_load_order',
value=new_plugins,
workplace=workplace)
return True
def _on_report_button_pressed(self, event): event.Skip() dbcfg = gmCfg.cCfgSQL() url = dbcfg.get2 ( option = 'external.urls.report_vaccine_ADR', workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace, bias = 'user' ) if url.strip() == '': url = dbcfg.get2 ( option = 'external.urls.report_ADR', workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace, bias = 'user' ) gmNetworkTools.open_url_in_browser(url = url)
def _on_report_button_pressed(self, event): event.Skip() dbcfg = gmCfg.cCfgSQL() url = dbcfg.get2 ( option = 'external.urls.report_vaccine_ADR', workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace, bias = 'user' ) if url.strip() == '': url = dbcfg.get2 ( option = 'external.urls.report_ADR', workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace, bias = 'user' ) gmNetworkTools.open_url_in_browser(url = url)
def __init__(self, parent, id):
"""Set up our specialised grid.
"""
# get connection
self.__backend = gmPG.ConnectionPool()
self.__defconn = self.__backend.GetConnection('blobs')
if self.__defconn is None:
_log.Log(gmLog.lErr, "Cannot retrieve lab data without database connection !")
raise gmExceptions.ConstructorError, "cLabDataGrid.__init__(): need db conn"
# connect to config database
self.__dbcfg = gmCfg.cCfgSQL(
aConn = self.__backend.GetConnection('default'),
aDBAPI = gmPG.dbapi
)
wx.Grid.__init__(
self,
parent,
id,
pos = wx.DefaultPosition,
size = wx.DefaultSize,
style= wx.WANTS_CHARS
)
self.__pat = gmPerson.gmCurrentPatient()
#wx.EVT_GRID_CELL_LEFT_DCLICK(self, self.OnLeftDClick)
# create new grid
self.__grid_unreviewed_results = self.CreateGrid(0, 0, wx.Grid.wx.GridSelectCells )
self.SetDefaultCellAlignment(wx.ALIGN_RIGHT,wx.ALIGN_CENTRE)
#renderer = apply(wxGridCellStringRenderer, ())
renderer = apply(cLabDataGridCellRenderer, ())
self.SetDefaultRenderer(renderer)
# There is a bug in wxGTK for this method...
self.AutoSizeColumns(True)
self.AutoSizeRows(True)
# attribute objects let you keep a set of formatting values
# in one spot, and reuse them if needed
font = self.GetFont()
#font.SetWeight(wx.BOLD)
attr = wx.GridCellAttr()
attr.SetFont(font)
#attr.SetBackgroundColour(wx.LIGHT_GREY)
attr.SetReadOnly(True)
def __init__(self, parent, id):
"""Set up our specialised grid.
"""
# get connection
self.__backend = gmPG.ConnectionPool()
self.__defconn = self.__backend.GetConnection('blobs')
if self.__defconn is None:
_log.Log(gmLog.lErr, "Cannot retrieve lab data without database connection !")
raise gmExceptions.ConstructorError, "cLabDataGrid.__init__(): need db conn"
# connect to config database
self.__dbcfg = gmCfg.cCfgSQL(
aConn = self.__backend.GetConnection('default'),
aDBAPI = gmPG.dbapi
)
wx.Grid.__init__(
self,
parent,
id,
pos = wx.DefaultPosition,
size = wx.DefaultSize,
style= wx.WANTS_CHARS
)
self.__pat = gmPerson.gmCurrentPatient()
#wx.EVT_GRID_CELL_LEFT_DCLICK(self, self.OnLeftDClick)
# create new grid
self.__grid_unreviewed_results = self.CreateGrid(0, 0, wx.Grid.wx.GridSelectCells )
self.SetDefaultCellAlignment(wx.ALIGN_RIGHT,wx.ALIGN_CENTRE)
#renderer = apply(wxGridCellStringRenderer, ())
renderer = apply(cLabDataGridCellRenderer, ())
self.SetDefaultRenderer(renderer)
# There is a bug in wxGTK for this method...
self.AutoSizeColumns(True)
self.AutoSizeRows(True)
# attribute objects let you keep a set of formatting values
# in one spot, and reuse them if needed
font = self.GetFont()
#font.SetWeight(wx.BOLD)
attr = wx.GridCellAttr()
attr.SetFont(font)
#attr.SetBackgroundColour(wx.LIGHT_GREY)
attr.SetReadOnly(True)
def new(): cfg_db = gmCfg.cCfgSQL() enc_type = cfg_db.get2 ( option = u'encounter.default_type', workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace, bias = u'user' ) if enc_type is None: enc_type = gmEMRStructItems.get_most_commonly_used_encounter_type() if enc_type is None: enc_type = u'in surgery' enc = gmEMRStructItems.create_encounter(fk_patient = patient.ID, enc_type = enc_type) saved = edit_encounter(parent = parent, encounter = enc) if saved: return True gmEMRStructItems.delete_encounter(pk_encounter = enc['pk_encounter']) return False
def GetPluginLoadList(option, plugin_dir = '', defaults = None, workplace=None):
"""Get a list of plugins to load.
1) from database if option is not None
2) from list of defaults
3) if 2 is None, from source directory (then stored in database)
FIXME: NOT from files in directories (important for py2exe)
"""
if workplace == 'System Fallback':
return ['gmProviderInboxPlugin', 'gmDataMiningPlugin']
if workplace is None:
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace
p_list = None
if option is not None:
dbcfg = gmCfg.cCfgSQL()
p_list = dbcfg.get2 (
option = option,
workplace = workplace,
bias = 'workplace',
default = defaults
)
if p_list is not None:
return p_list
if defaults is None:
p_list = get_installed_plugins(plugin_dir = plugin_dir)
if (len(p_list) == 0):
_log.error('cannot find plugins by scanning plugin directory ?!?')
return defaults
else:
p_list = defaults
# store for current user/current workplace
dbcfg.set (
option = option,
value = p_list,
workplace = workplace
)
_log.debug("plugin load list stored: %s" % str(p_list))
return p_list
def _on_report_button_pressed(self, event): event.Skip() dbcfg = gmCfg.cCfgSQL() url = dbcfg.get2 ( option = u'external.urls.report_vaccine_ADR', workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace, bias = u'user', default = u'http://www.pei.de/cln_042/SharedDocs/Downloads/fachkreise/uaw/meldeboegen/b-ifsg-meldebogen,templateId=raw,property=publicationFile.pdf/b-ifsg-meldebogen.pdf' ) if url.strip() == u'': url = dbcfg.get2 ( option = u'external.urls.report_ADR', workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace, bias = u'user' ) gmNetworkTools.open_url_in_browser(url = url)
def load_persons_from_kvks():
dbcfg = gmCfg.cCfgSQL()
kvk_dir = os.path.abspath(os.path.expanduser(dbcfg.get2 (
option = 'DE.KVK.spool_dir',
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias = 'workplace',
default = '/var/spool/kvkd/'
#default = u'/home/ncq/gnumed/'
)))
dtos = []
for dto in gmKVK.get_available_kvks_as_dtos(spool_dir = kvk_dir):
dtos.append({'dto': dto, 'source': 'KVK'})
# for dto in gmKVK.get_available_CCRdr_files_as_dtos(spool_dir = kvk_dir):
# dtos.append({'dto': dto, 'source': dto.source})
return dtos
def load_persons_from_kvks():
dbcfg = gmCfg.cCfgSQL()
kvk_dir = os.path.abspath(os.path.expanduser(dbcfg.get2 (
option = 'DE.KVK.spool_dir',
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias = 'workplace',
default = '/var/spool/kvkd/'
#default = u'/home/ncq/gnumed/'
)))
dtos = []
for dto in gmKVK.get_available_kvks_as_dtos(spool_dir = kvk_dir):
dtos.append({'dto': dto, 'source': 'KVK'})
# for dto in gmKVK.get_available_CCRdr_files_as_dtos(spool_dir = kvk_dir):
# dtos.append({'dto': dto, 'source': dto.source})
return dtos
def configure_list_from_list_option(parent=None,
message=None,
option=None,
bias='user',
default_value=None,
choices=None,
columns=None,
data=None,
caption=None,
picks=None):
if default_value is None:
default_value = []
dbcfg = gmCfg.cCfgSQL()
current_value = dbcfg.get2(
option=option,
workplace=gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias=bias,
default=default_value)
if parent is None:
parent = wx.GetApp().GetTopWindow()
if caption is None:
caption = _('Configuration')
# setup item picker
picker = gmListWidgets.cItemPickerDlg(parent, -1, msg=message)
picker.set_columns(columns)
picker.set_choices(choices)
picker.set_picks(picks)
result = picker.ShowModal()
if result == wx.ID_CANCEL:
picker.DestroyLater()
return
picks = picker.get_picks()
picker.DestroyLater()
dbcfg.set(workplace=gmPraxis.gmCurrentPraxisBranch().active_workplace,
option=option,
value=picks)
return
def new():
cfg_db = gmCfg.cCfgSQL()
enc_type = cfg_db.get2(
option=u'encounter.default_type',
workplace=gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias=u'user')
if enc_type is None:
enc_type = gmEMRStructItems.get_most_commonly_used_encounter_type()
if enc_type is None:
enc_type = u'in surgery'
enc = gmEMRStructItems.create_encounter(fk_patient=patient.ID,
enc_type=enc_type)
saved = edit_encounter(parent=parent, encounter=enc)
if saved:
return True
gmEMRStructItems.delete_encounter(pk_encounter=enc['pk_encounter'])
return False
def configure_boolean_option(parent=None,
question=None,
option=None,
button_tooltips=None):
if parent is None:
parent = wx.GetApp().GetTopWindow()
tooltips = [
_('Set "%s" to <True>.') % option,
_('Set "%s" to <False>.') % option,
_('Abort the dialog and do not change the current setting.')
]
if button_tooltips is not None:
for idx in range(len(button_tooltips)):
tooltips[idx] = button_tooltips[idx]
dlg = gmGuiHelpers.c3ButtonQuestionDlg(parent,
-1,
caption=_('Configuration'),
question=question,
button_defs=[{
'label': _('Yes'),
'tooltip': tooltips[0]
}, {
'label': _('No'),
'tooltip': tooltips[1]
}, {
'label': _('Cancel'),
'tooltip': tooltips[2],
'default': True
}])
decision = dlg.ShowModal()
dbcfg = gmCfg.cCfgSQL()
if decision == wx.ID_YES:
dbcfg.set(workplace=gmPraxis.gmCurrentPraxisBranch().active_workplace,
option=option,
value=True)
elif decision == wx.ID_NO:
dbcfg.set(workplace=gmPraxis.gmCurrentPraxisBranch().active_workplace,
option=option,
value=False)
return
def configure_boolean_option(parent=None, question=None, option=None, button_tooltips=None):
if parent is None:
parent = wx.GetApp().GetTopWindow()
tooltips = [
_('Set "%s" to <True>.') % option,
_('Set "%s" to <False>.') % option,
_('Abort the dialog and do not change the current setting.')
]
if button_tooltips is not None:
for idx in range(len(button_tooltips)):
tooltips[idx] = button_tooltips[idx]
dlg = gmGuiHelpers.c3ButtonQuestionDlg (
parent,
-1,
caption = _('Configuration'),
question = question,
button_defs = [
{'label': _('Yes'), 'tooltip': tooltips[0]},
{'label': _('No'), 'tooltip': tooltips[1]},
{'label': _('Cancel'), 'tooltip': tooltips[2], 'default': True}
]
)
decision = dlg.ShowModal()
dbcfg = gmCfg.cCfgSQL()
if decision == wx.ID_YES:
dbcfg.set (
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace,
option = option,
value = True
)
elif decision == wx.ID_NO:
dbcfg.set (
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace,
option = option,
value = False
)
return
def GetPluginLoadList(option, plugin_dir='', defaults=None, workplace=None):
"""Get a list of plugins to load.
1) from database if option is not None
2) from list of defaults
3) if 2 is None, from source directory (then stored in database)
FIXME: NOT from files in directories (important for py2exe)
"""
if workplace == 'System Fallback':
return ['gmProviderInboxPlugin', 'gmDataMiningPlugin']
if workplace is None:
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace
p_list = None
if option is not None:
dbcfg = gmCfg.cCfgSQL()
p_list = dbcfg.get2(option=option,
workplace=workplace,
bias='workplace',
default=defaults)
if p_list is not None:
return p_list
if defaults is None:
p_list = get_installed_plugins(plugin_dir=plugin_dir)
if (len(p_list) == 0):
_log.error('cannot find plugins by scanning plugin directory ?!?')
return defaults
else:
p_list = defaults
# store for current user/current workplace
dbcfg.set(option=option, value=p_list, workplace=workplace)
_log.debug("plugin load list stored: %s" % str(p_list))
return p_list
def configure_list_from_list_option(parent=None, message=None, option=None, bias='user', default_value=None, choices=None, columns=None, data=None, caption=None, picks=None):
if default_value is None:
default_value = []
dbcfg = gmCfg.cCfgSQL()
current_value = dbcfg.get2 (
option = option,
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias = bias,
default = default_value
)
if parent is None:
parent = wx.GetApp().GetTopWindow()
if caption is None:
caption = _('Configuration')
# setup item picker
picker = gmListWidgets.cItemPickerDlg(parent, -1, msg = message)
picker.set_columns(columns)
picker.set_choices(choices)
picker.set_picks(picks)
result = picker.ShowModal()
if result == wx.ID_CANCEL:
picker.DestroyLater()
return
picks = picker.get_picks()
picker.DestroyLater()
dbcfg.set (
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace,
option = option,
value = picks
)
return
def _get_very_recent_encounter(pk_identity):
cfg_db = gmCfg.cCfgSQL()
min_ttl = cfg_db.get2 (
option = u'encounter.minimum_ttl',
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias = u'user',
default = u'1 hour 30 minutes'
)
cmd = u"""
SELECT pk_encounter
FROM clin.v_most_recent_encounters
WHERE
pk_patient = %s
and
last_affirmed > (now() - %s::interval)
ORDER BY
last_affirmed DESC"""
rows, idx = gmPG2.run_ro_queries(queries = [{'cmd': cmd, 'args': [pk_identity, min_ttl]}])
if len(rows) == 0:
_log.debug('no <very recent> encounter (younger than [%s]) found' % min_ttl)
return None
_log.debug('"very recent" encounter [%s] found and re-activated', rows[0][0])
return gmEMRStructItems.cEncounter(aPK_obj = rows[0][0])
def _decide_on_active_encounter(pk_identity):
enc = _get_very_recent_encounter(pk_identity)
if enc is not None:
return enc
_here = gmPraxis.gmCurrentPraxisBranch()
cfg_db = gmCfg.cCfgSQL()
enc_type = cfg_db.get2 (
option = u'encounter.default_type',
workplace = _here.active_workplace,
bias = u'user'
)
if enc_type is None:
enc_type = gmEMRStructItems.get_most_commonly_used_encounter_type()
if enc_type is None:
enc_type = u'in surgery'
enc = gmEMRStructItems.create_encounter(fk_patient = pk_identity, enc_type = enc_type)
enc['pk_org_unit'] = _here['pk_org_unit']
enc.save()
_log.debug('new encounter [%s] initiated' % enc['pk_encounter'])
return enc
def __refresh_soap_notebook(self): self.__reset_soap_notebook() if self.__pat is None: return dbcfg = gmCfg.cCfgSQL() auto_open_recent_problems = bool(dbcfg.get2 ( option = 'horstspace.soap_editor.auto_open_latest_episodes', workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace, bias = 'user', default = True )) emr = self.__pat.emr recent_epis = emr.active_encounter.get_episodes() prev_enc = emr.get_last_but_one_encounter() if prev_enc is not None: recent_epis.extend(prev_enc.get_episodes()) for epi in recent_epis: if not epi['episode_open']: continue self._NB_soap_editors.add_editor(problem = epi)
def __refresh_soap_notebook(self): self.__reset_soap_notebook() if self.__pat is None: return dbcfg = gmCfg.cCfgSQL() auto_open_recent_problems = bool(dbcfg.get2 ( option = 'horstspace.soap_editor.auto_open_latest_episodes', workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace, bias = 'user', default = True )) emr = self.__pat.emr recent_epis = emr.active_encounter.get_episodes() prev_enc = emr.get_last_but_one_encounter() if prev_enc is not None: recent_epis.extend(prev_enc.get_episodes()) for epi in recent_epis: if not epi['episode_open']: continue self._NB_soap_editors.add_editor(problem = epi)
def load_data_packs_list():
dbcfg = gmCfg.cCfgSQL()
dpl_url = dbcfg.get2(
option=dpl_url_option,
workplace=gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias='workplace',
default=default_dpl_url)
items = []
data = []
dpl_fname = gmNetworkTools.download_data_packs_list(dpl_url)
if dpl_fname is None:
return (items, data)
try:
_cfg.add_file_source(source='data-packs', file=dpl_fname)
except (UnicodeDecodeError):
_log.exception("cannot read data pack list from [%s]", dpl_fname)
return (items, data)
packs = _cfg.get('data packs',
'data packs',
source_order=[('data-packs', 'return')])
if packs is None:
_log.info('no data packs listed in data packs list file')
_cfg.remove_source('data-packs')
return (items, data)
for pack in packs:
_log.debug('reading pack [%s] metadata', pack)
pack_group = u'pack %s' % pack
name = _cfg.get(pack_group,
u'name',
source_order=[('data-packs', 'return')])
pack_url = _cfg.get(pack_group,
u'URL',
source_order=[('data-packs', 'return')])
md5_url = pack_url + u'.md5'
db_min = _cfg.get(pack_group,
u'minimum database version',
source_order=[('data-packs', 'return')])
converted, db_min = gmTools.input2int(
db_min,
# here we introduced data packs:
#16,
0,
# no use looking at data packs requiring a database > the current database:
_cfg.get(option='database_version'))
if not converted:
_log.error('cannot convert minimum database version [%s]', db_min)
continue
db_max = _cfg.get(pack_group,
u'maximum database version',
source_order=[('data-packs', 'return')])
if db_max is None:
db_max = sys.maxint
converted, db_max = gmTools.input2int(
db_max,
db_min # max version must be at least db_min
)
if not converted:
_log.error('cannot convert maximum database version [%s]', db_max)
continue
if _cfg.get(option='database_version') < db_min:
_log.error(
'ignoring data pack: current database version (%s) < minimum required database version (%s)',
_cfg.get(option='database_version'), db_min)
continue
if _cfg.get(option='database_version') > db_max:
_log.error(
'ignoring data pack: current database version (%s) > maximum allowable database version (%s)',
_cfg.get(option='database_version'), db_max)
continue
items.append([name, u'v%s' % db_min, u'v%s' % db_max, pack_url])
data.append({
'name': name,
'pack_url': pack_url,
'md5_url': md5_url,
'db_min': db_min,
'db_max': db_max
})
_cfg.remove_source('data-packs')
return (items, data)
def move_episode_to_issue(episode=None, target_issue=None, save_to_backend=False):
"""Prepare changing health issue for an episode.
Checks for two-open-episodes conflict. When this
function succeeds, the pk_health_issue has been set
on the episode instance and the episode should - for
all practical purposes - be ready for save_payload().
"""
# episode is closed: should always work
if not episode['episode_open']:
episode['pk_health_issue'] = target_issue['pk_health_issue']
if save_to_backend:
episode.save_payload()
return True
# un-associate: should always work, too
if target_issue is None:
episode['pk_health_issue'] = None
if save_to_backend:
episode.save_payload()
return True
# try closing possibly expired episode on target issue if any
db_cfg = gmCfg.cCfgSQL()
epi_ttl = int(db_cfg.get2 (
option = 'episode.ttl',
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias = 'user',
default = 60 # 2 months
))
if target_issue.close_expired_episode(ttl=epi_ttl) is True:
gmDispatcher.send(signal='statustext', msg=_('Closed episodes older than %s days on health issue [%s]') % (epi_ttl, target_issue['description']))
existing_epi = target_issue.get_open_episode()
# no more open episode on target issue: should work now
if existing_epi is None:
episode['pk_health_issue'] = target_issue['pk_health_issue']
if save_to_backend:
episode.save_payload()
return True
# don't conflict on SELF ;-)
if existing_epi['pk_episode'] == episode['pk_episode']:
episode['pk_health_issue'] = target_issue['pk_health_issue']
if save_to_backend:
episode.save_payload()
return True
# we got two open episodes at once, ask user
move_range = (episode.best_guess_clinical_start_date, episode.best_guess_clinical_end_date)
if move_range[1] is None:
move_range_end = '?'
else:
move_range_end = move_range[1].strftime('%m/%y')
exist_range = (existing_epi.best_guess_clinical_start_date, existing_epi.best_guess_clinical_end_date)
if exist_range[1] is None:
exist_range_end = '?'
else:
exist_range_end = exist_range[1].strftime('%m/%y')
question = _(
'You want to associate the running episode:\n\n'
' "%(new_epi_name)s" (%(new_epi_start)s - %(new_epi_end)s)\n\n'
'with the health issue:\n\n'
' "%(issue_name)s"\n\n'
'There already is another episode running\n'
'for this health issue:\n\n'
' "%(old_epi_name)s" (%(old_epi_start)s - %(old_epi_end)s)\n\n'
'However, there can only be one running\n'
'episode per health issue.\n\n'
'Which episode do you want to close ?'
) % {
'new_epi_name': episode['description'],
'new_epi_start': move_range[0].strftime('%m/%y'),
'new_epi_end': move_range_end,
'issue_name': target_issue['description'],
'old_epi_name': existing_epi['description'],
'old_epi_start': exist_range[0].strftime('%m/%y'),
'old_epi_end': exist_range_end
}
dlg = gmGuiHelpers.c3ButtonQuestionDlg (
parent = None,
id = -1,
caption = _('Resolving two-running-episodes conflict'),
question = question,
button_defs = [
{'label': _('old episode'), 'default': True, 'tooltip': _('close existing episode "%s"') % existing_epi['description']},
{'label': _('new episode'), 'default': False, 'tooltip': _('close moving (new) episode "%s"') % episode['description']}
]
)
decision = dlg.ShowModal()
if decision == wx.ID_CANCEL:
# button 3: move cancelled by user
return False
elif decision == wx.ID_YES:
# button 1: close old episode
existing_epi['episode_open'] = False
existing_epi.save_payload()
elif decision == wx.ID_NO:
# button 2: close new episode
episode['episode_open'] = False
else:
raise ValueError('invalid result from c3ButtonQuestionDlg: [%s]' % decision)
episode['pk_health_issue'] = target_issue['pk_health_issue']
if save_to_backend:
episode.save_payload()
return True
def edit_visual_progress_note(filename=None,
episode=None,
discard_unmodified=False,
doc_part=None,
health_issue=None):
"""This assumes <filename> contains an image which can be handled by the configured image editor."""
if doc_part is not None:
filename = doc_part.export_to_file()
if filename is None:
gmDispatcher.send(
signal=u'statustext',
msg=_('Cannot export visual progress note to file.'))
return None
dbcfg = gmCfg.cCfgSQL()
cmd = dbcfg.get2(
option=u'external.tools.visual_soap_editor_cmd',
workplace=gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias='user')
if cmd is None:
gmDispatcher.send(
signal=u'statustext',
msg=_('Editor for visual progress note not configured.'),
beep=False)
cmd = configure_visual_progress_note_editor()
if cmd is None:
gmDispatcher.send(
signal=u'statustext',
msg=_('Editor for visual progress note not configured.'),
beep=True)
return None
if u'%(img)s' in cmd:
cmd = cmd % {u'img': filename}
else:
cmd = u'%s %s' % (cmd, filename)
if discard_unmodified:
original_stat = os.stat(filename)
original_md5 = gmTools.file2md5(filename)
success = gmShellAPI.run_command_in_shell(cmd, blocking=True)
if not success:
gmGuiHelpers.gm_show_error(
_('There was a problem with running the editor\n'
'for visual progress notes.\n'
'\n'
' [%s]\n'
'\n') % cmd, _('Editing visual progress note'))
return None
try:
open(filename, 'r').close()
except Exception:
_log.exception('problem accessing visual progress note file [%s]',
filename)
gmGuiHelpers.gm_show_error(
_('There was a problem reading the visual\n'
'progress note from the file:\n'
'\n'
' [%s]\n'
'\n') % filename, _('Saving visual progress note'))
return None
if discard_unmodified:
modified_stat = os.stat(filename)
# same size ?
if original_stat.st_size == modified_stat.st_size:
modified_md5 = gmTools.file2md5(filename)
# same hash ?
if original_md5 == modified_md5:
_log.debug('visual progress note (template) not modified')
# ask user to decide
msg = _(
u'You either created a visual progress note from a template\n'
u'in the database (rather than from a file on disk) or you\n'
u'edited an existing visual progress note.\n'
u'\n'
u'The template/original was not modified at all, however.\n'
u'\n'
u'Do you still want to save the unmodified image as a\n'
u'visual progress note into the EMR of the patient ?\n')
save_unmodified = gmGuiHelpers.gm_show_question(
msg, _('Saving visual progress note'))
if not save_unmodified:
_log.debug('user discarded unmodified note')
return
if doc_part is not None:
_log.debug('updating visual progress note')
doc_part.update_data_from_file(fname=filename)
doc_part.set_reviewed(technically_abnormal=False,
clinically_relevant=True)
return None
if not isinstance(episode, gmEMRStructItems.cEpisode):
if episode is None:
episode = _('visual progress notes')
pat = gmPerson.gmCurrentPatient()
emr = pat.emr
episode = emr.add_episode(episode_name=episode.strip(),
pk_health_issue=health_issue,
is_open=False)
doc = gmDocumentWidgets.save_file_as_new_document(
filename=filename,
document_type=gmDocuments.DOCUMENT_TYPE_VISUAL_PROGRESS_NOTE,
episode=episode,
unlock_patient=False,
pk_org_unit=gmPraxis.gmCurrentPraxisBranch()['pk_org_unit'])
doc.set_reviewed(technically_abnormal=False, clinically_relevant=True)
return doc
def load_data_packs_list():
dbcfg = gmCfg.cCfgSQL()
dpl_url = dbcfg.get2 (
option = dpl_url_option,
workplace = gmPraxis.gmCurrentPraxisBranch().active_workplace,
bias = 'workplace',
default = default_dpl_url
)
items = []
data = []
dpl_fname = gmNetworkTools.download_data_packs_list(dpl_url)
if dpl_fname is None:
return (items, data)
try:
_cfg.add_file_source(source = 'data-packs', file = dpl_fname)
except (UnicodeDecodeError):
_log.exception("cannot read data pack list from [%s]", dpl_fname)
return (items, data)
packs = _cfg.get('data packs', 'data packs', source_order = [('data-packs', 'return')])
if packs is None:
_log.info('no data packs listed in data packs list file')
_cfg.remove_source('data-packs')
return (items, data)
for pack in packs:
_log.debug('reading pack [%s] metadata', pack)
pack_group = u'pack %s' % pack
name = _cfg.get(pack_group, u'name', source_order = [('data-packs', 'return')])
pack_url = _cfg.get(pack_group, u'URL', source_order = [('data-packs', 'return')])
md5_url = pack_url + u'.md5'
db_min = _cfg.get(pack_group, u'minimum database version', source_order = [('data-packs', 'return')])
converted, db_min = gmTools.input2int (
db_min,
# here we introduced data packs:
#16,
0,
# no use looking at data packs requiring a database > the current database:
_cfg.get(option = 'database_version')
)
if not converted:
_log.error('cannot convert minimum database version [%s]', db_min)
continue
db_max = _cfg.get(pack_group, u'maximum database version', source_order = [('data-packs', 'return')])
if db_max is None:
db_max = sys.maxint
converted, db_max = gmTools.input2int (
db_max,
db_min # max version must be at least db_min
)
if not converted:
_log.error('cannot convert maximum database version [%s]', db_max)
continue
if _cfg.get(option = 'database_version') < db_min:
_log.error('ignoring data pack: current database version (%s) < minimum required database version (%s)', _cfg.get(option = 'database_version'), db_min)
continue
if _cfg.get(option = 'database_version') > db_max:
_log.error('ignoring data pack: current database version (%s) > maximum allowable database version (%s)', _cfg.get(option = 'database_version'), db_max)
continue
items.append([name, u'v%s' % db_min, u'v%s' % db_max, pack_url])
data.append ({
'name': name,
'pack_url': pack_url,
'md5_url': md5_url,
'db_min': db_min,
'db_max': db_max
})
_cfg.remove_source('data-packs')
return (items, data)