def test_sortOnEmptySet():
"""
Testing the sort method on a empty set
"""
from MolKit.tree import TreeNodeSet
set = TreeNodeSet([])
set.sort()
del set
def test_sortOnEmptySet():
"""
Testing the sort method on a empty set
"""
from MolKit.tree import TreeNodeSet
set = TreeNodeSet([])
set.sort()
del set
def get(self, event=None):
if not self.lb.curselection():
res = []
else:
res = TreeNodeSet()
for ent in map(int, self.lb.curselection()):
mol = self.nameObject[self.entries[ent][0]]
res.append(mol)
if self.mode == 'single' and res:
res = res[0]
return res
def get(self, event = None):
if not self.lb.curselection():
res = []
else:
res = TreeNodeSet()
for ent in map( int, self.lb.curselection() ):
mol= self.nameObject[self.entries[ ent ][0]]
res.append(mol)
if self.mode=='single' and res:
res = res[0]
return res
def doit(self, nodes, filename):
self.log(nodes, filename)
if type(nodes)==types.StringType:
nodes = self.vf.Mols.NodesFromName(nodes)
assert isinstance(nodes,TreeNode) or isinstance(nodes,TreeNodeSet)
if isinstance(nodes,TreeNode):
nodes = TreeNodeSet([nodes])
if len(nodes)==0: return
atoms = nodes.findType( Atom )
molecules = atoms.top.uniq()
for mol in molecules:
self.writeCMsurface(mol, '%s.%s.m'%(filename, mol.name))
def doit(self, nodes, filename):
self.log(nodes, filename)
if type(nodes) == types.StringType:
nodes = self.vf.Mols.NodesFromName(nodes)
assert isinstance(nodes, TreeNode) or isinstance(nodes, TreeNodeSet)
if isinstance(nodes, TreeNode):
nodes = TreeNodeSet([nodes])
if len(nodes) == 0: return
atoms = nodes.findType(Atom)
molecules = atoms.top.uniq()
for mol in molecules:
self.writeCMsurface(mol, '%s.%s.m' % (filename, mol.name))
def __init__(self, objects=None, stringRepr=None, comments='', keywords=[]):
TreeNodeSet.__init__(self, objects, SecondaryStructure, stringRepr,
comments, keywords)
def __init__(self, objects=None, stringRepr=None, comments="", keywords=[]):
TreeNodeSet.__init__(self, objects, Residue, stringRepr, comments, keywords)
