Python MacroNode.beforeAddingToNetwork Exemples

Exemple #1

Fichier : recluster.py Projet : 8848/Pymol-script-repo

    def beforeAddingToNetwork(self, net):
        MacroNode.beforeAddingToNetwork(self, net)
        ## loading libraries ##
        from MolKit.VisionInterface.MolKitNodes import molkitlib
        net.editor.addLibraryInstance(molkitlib,"MolKit.VisionInterface.MolKitNodes", "molkitlib")

        from Vision.StandardNodes import stdlib
        net.editor.addLibraryInstance(stdlib,"Vision.StandardNodes", "stdlib")

Exemple #2

Fichier : PrepareAD4Ligand.py Projet : jaimergp/autodocktools-prepare-py3k

    def beforeAddingToNetwork(self, net):
        MacroNode.beforeAddingToNetwork(self, net)
        ## loading libraries ##
        from AutoDockTools.VisionInterface.AdtNodes import adtlib
        net.editor.addLibraryInstance(adtlib,"AutoDockTools.VisionInterface.AdtNodes", "adtlib")

        from MolKit.VisionInterface.MolKitNodes import molkitlib
        net.editor.addLibraryInstance(molkitlib,"MolKit.VisionInterface.MolKitNodes", "molkitlib")

Exemple #3

Fichier : plotdb10FFT.py Projet : MolecularFlipbook/FlipbookApp

    def beforeAddingToNetwork(self, net):
        MacroNode.beforeAddingToNetwork(self, net)
        ## loading libraries ##
        from Vision.matplotlibNodes import matplotliblib
        net.editor.addLibraryInstance(matplotliblib,"Vision.matplotlibNodes", "matplotliblib")

        from MyDefaultLib import mydefaultlib
        net.editor.addLibraryInstance(mydefaultlib,"MyDefaultLib", "mydefaultlib")

Exemple #4

Fichier : PrepareAD3Ligand.py Projet : 8848/Pymol-script-repo

    def beforeAddingToNetwork(self, net):
        MacroNode.beforeAddingToNetwork(self, net)
        ## loading libraries ##
        from AutoDockTools.VisionInterface.AdtNodes import adtlib
        net.editor.addLibraryInstance(adtlib,"AutoDockTools.VisionInterface.AdtNodes", "adtlib")

        from MolKit.VisionInterface.MolKitNodes import molkitlib
        net.editor.addLibraryInstance(molkitlib,"MolKit.VisionInterface.MolKitNodes", "molkitlib")

Exemple #5

 def beforeAddingToNetwork(self, net):
     MacroNode.beforeAddingToNetwork(self, net)
     from WebServices.VisionInterface.WSNodes import wslib
     net.getEditor().addLibraryInstance(wslib,"WebServices.VisionInterface.WSNodes", "wslib")
     from WebServices.VisionInterface.WSNodes import addOpalServerAsCategory
     try:
         addOpalServerAsCategory("http://kryptonite.nbcr.net/opal2", replace=False)
     except:
         pass

Exemple #6

    def beforeAddingToNetwork(self, net):
        MacroNode.beforeAddingToNetwork(self, net)
        ## loading libraries ##
        from MolKit.VisionInterface.MolKitNodes import molkitlib
        net.editor.addLibraryInstance(molkitlib,
                                      "MolKit.VisionInterface.MolKitNodes",
                                      "molkitlib")

        from Vision.StandardNodes import stdlib
        net.editor.addLibraryInstance(stdlib, "Vision.StandardNodes", "stdlib")

Exemple #7

Fichier : StereoSep.py Projet : lisarosalina/App

    def beforeAddingToNetwork(self, net):
        MacroNode.beforeAddingToNetwork(self, net)
        ## loading libraries ##
        from DejaVu.VisionInterface.DejaVuNodes import vizlib
        net.editor.addLibraryInstance(vizlib,
                                      "DejaVu.VisionInterface.DejaVuNodes",
                                      "vizlib")

        from Vision.StandardNodes import stdlib
        net.editor.addLibraryInstance(stdlib, "Vision.StandardNodes", "stdlib")

Exemple #8

    def beforeAddingToNetwork(self, net):
        MacroNode.beforeAddingToNetwork(self, net)
        ## loading libraries ##
        from Vision.matplotlibNodes import matplotliblib
        net.editor.addLibraryInstance(matplotliblib, "Vision.matplotlibNodes",
                                      "matplotliblib")

        from MyDefaultLib import mydefaultlib
        net.editor.addLibraryInstance(mydefaultlib, "MyDefaultLib",
                                      "mydefaultlib")

Exemple #9

Fichier : MapPotOnGeom.py Projet : MolecularFlipbook/FlipbookApp

    def beforeAddingToNetwork(self, net):
        MacroNode.beforeAddingToNetwork(self, net)
        ## loading libraries ##
        from Volume.VisionInterface.VolumeNodes import vollib
        net.editor.addLibraryInstance(vollib,"Volume.VisionInterface.VolumeNodes", "vollib")

        from Vision.StandardNodes import stdlib
        net.editor.addLibraryInstance(stdlib,"Vision.StandardNodes", "stdlib")

        from DejaVu.VisionInterface.DejaVuNodes import vizlib
        net.editor.addLibraryInstance(vizlib,"DejaVu.VisionInterface.DejaVuNodes", "vizlib")

Exemple #10

Fichier : msms_ws.py Projet : MolecularFlipbook/FlipbookApp

    def beforeAddingToNetwork(self, net):
        MacroNode.beforeAddingToNetwork(self, net)
        ## loading libraries ##
        from MolKit.VisionInterface.MolKitNodes import molkitlib
        net.editor.addLibraryInstance(molkitlib,"MolKit.VisionInterface.MolKitNodes", "molkitlib")

        from DejaVu.VisionInterface.DejaVuNodes import vizlib
        net.editor.addLibraryInstance(vizlib,"DejaVu.VisionInterface.DejaVuNodes", "vizlib")

        from Vision.StandardNodes import stdlib
        net.editor.addLibraryInstance(stdlib,"Vision.StandardNodes", "stdlib")
        
        if self.library and not self.library.libraryDescr.has_key(self.host[1:-1]):
            from WebServices.VisionInterface.WSNodes import addreplaceCategory
            addreplaceCategory(self.host[1:-1])  

Exemple #11

Fichier : VirtualScreeningCSF.py Projet : 8848/Pymol-script-repo

 def beforeAddingToNetwork(self, net):
     MacroNode.beforeAddingToNetwork(self, net)
     from AutoDockTools.VisionInterface.Adt import Adt
     from WebServices.VisionInterface.WSNodes import wslib
     from Vision.StandardNodes import stdlib
     net.getEditor().addLibraryInstance(wslib,"WebServices.VisionInterface.WSNodes", "wslib")
     from WebServices.VisionInterface.WSNodes import addOpalServerAsCategory
     try:
         addOpalServerAsCategory("http://ws.nbcr.net/opal2", replace=False)
     except:
         pass
     try:
         addOpalServerAsCategory("http://oolitevm.calit2.optiputer.net/opal2", replace=False)
     except:
         pass
     try:
         addOpalServerAsCategory("http://kryptonite.nbcr.net/opal2", replace=False)
     except:
         pass

Exemple #12

    def beforeAddingToNetwork(self, net):
        MacroNode.beforeAddingToNetwork(self, net)
        ## loading libraries ##
        from MolKit.VisionInterface.MolKitNodes import molkitlib
        net.editor.addLibraryInstance(molkitlib,
                                      "MolKit.VisionInterface.MolKitNodes",
                                      "molkitlib")

        from DejaVu.VisionInterface.DejaVuNodes import vizlib
        net.editor.addLibraryInstance(vizlib,
                                      "DejaVu.VisionInterface.DejaVuNodes",
                                      "vizlib")

        from Vision.StandardNodes import stdlib
        net.editor.addLibraryInstance(stdlib, "Vision.StandardNodes", "stdlib")

        if self.library and not self.library.libraryDescr.has_key(
                self.host[1:-1]):
            from WebServices.VisionInterface.WSNodes import addreplaceCategory
            addreplaceCategory(self.host[1:-1])

Exemple #13

Fichier : VirtualScreeningCSF.py Projet : lisarosalina/App

 def beforeAddingToNetwork(self, net):
     MacroNode.beforeAddingToNetwork(self, net)
     from AutoDockTools.VisionInterface.Adt import Adt
     from WebServices.VisionInterface.WSNodes import wslib
     from Vision.StandardNodes import stdlib
     net.getEditor().addLibraryInstance(
         wslib, "WebServices.VisionInterface.WSNodes", "wslib")
     from WebServices.VisionInterface.WSNodes import addOpalServerAsCategory
     try:
         addOpalServerAsCategory("http://ws.nbcr.net/opal2", replace=False)
     except:
         pass
     try:
         addOpalServerAsCategory(
             "http://oolitevm.calit2.optiputer.net/opal2", replace=False)
     except:
         pass
     try:
         addOpalServerAsCategory("http://kryptonite.nbcr.net/opal2",
                                 replace=False)
     except:
         pass