def test_6s_example1(self):
# Implements Example_In_1.txt from the 6S distribution in Py6S
# Tests against manual run of that file
s = SixS()
s.geometry = Geometry.User()
s.geometry.solar_z = 40
s.geometry.solar_a = 100
s.geometry.view_z = 45
s.geometry.view_a = 50
s.geometry.month = 7
s.geometry.day = 23
s.atmos_profile = AtmosProfile.UserWaterAndOzone(3.0, 3.5)
s.aero_profile = AeroProfile.User(dust=0.25,
water=0.25,
oceanic=0.25,
soot=0.25)
s.aot550 = 0.5
s.altitudes.set_target_custom_altitude(0.2)
s.altitudes.set_sensor_custom_altitude(3.3, aot=0.25)
s.wavelength = Wavelength(PredefinedWavelengths.AVHRR_NOAA9_B1)
s.ground_reflectance = GroundReflectance.HeterogeneousLambertian(
0.5, GroundReflectance.ClearWater,
GroundReflectance.GreenVegetation)
s.atmos_corr = AtmosCorr.AtmosCorrBRDFFromReflectance(0.1)
s.run()
self.assertAlmostEqual(s.outputs.apparent_radiance,
12.749,
delta=0.002)
def __init__(self,
bandnums,
wavelengths,
geometry,
date_time,
sensor=None):
""" Run SixS atmospheric model using Py6S """
start = datetime.datetime.now()
VerboseOut('Running atmospheric model (6S)', 2)
s = SixS()
# Geometry
s.geometry = Geometry.User()
s.geometry.from_time_and_location(geometry['lat'], geometry['lon'],
str(date_time), geometry['zenith'],
geometry['azimuth'])
s.altitudes = Altitudes()
s.altitudes.set_target_sea_level()
s.altitudes.set_sensor_satellite_level()
doy = (date_time - datetime.datetime(date_time.year, 1, 1)).days + 1
# Atmospheric profile
s.atmos_profile = atmospheric_model(doy, geometry['lat'])
# Aerosols
# TODO - dynamically adjust AeroProfile?
s.aero_profile = AeroProfile.PredefinedType(AeroProfile.Continental)
self.aod = aodData.get_aod(geometry['lat'], geometry['lon'],
date_time.date())
s.aot550 = self.aod[1]
# Other settings
s.ground_reflectance = GroundReflectance.HomogeneousLambertian(
GroundReflectance.GreenVegetation)
s.atmos_corr = AtmosCorr.AtmosCorrLambertianFromRadiance(1.0)
# Used for testing
try:
stdout = sys.stdout
funcs = {
'LT5': SixSHelpers.Wavelengths.run_landsat_tm,
'LT7': SixSHelpers.Wavelengths.run_landsat_etm,
# LC8 doesn't seem to work
#'LC8': SixSHelpers.Wavelengths.run_landsat_oli
}
if sensor in funcs.keys():
sys.stdout = open(os.devnull, 'w')
wvlens, outputs = funcs[sensor](s)
sys.stdout = stdout
else:
# Use wavelengths
outputs = []
for wv in wavelengths:
s.wavelength = Wavelength(wv[0], wv[1])
s.run()
outputs.append(s.outputs)
except Exception, e:
sys.stdout = stdout
raise AtmCorrException("Error running 6S: %s" % e)
def test_atmos_corr_radiance(self):
s = SixS()
s.atmos_corr = AtmosCorr.AtmosCorrLambertianFromRadiance(130.1)
s.run()
self.assertAlmostEqual(
s.outputs.atmos_corrected_reflectance_lambertian,
0.29048,
delta=0.002)
def __init__(self, bandnums, wavelengths, geometry, date_time, sensor=None):
""" Run SixS atmospheric model using Py6S """
start = datetime.datetime.now()
verbose_out('Running atmospheric model (6S)', 2)
s = SixS()
# Geometry
s.geometry = Geometry.User()
s.geometry.from_time_and_location(geometry['lat'], geometry['lon'], str(date_time),
geometry['zenith'], geometry['azimuth'])
s.altitudes = Altitudes()
s.altitudes.set_target_sea_level()
s.altitudes.set_sensor_satellite_level()
doy = (date_time - datetime.datetime(date_time.year, 1, 1)).days + 1
# Atmospheric profile
s.atmos_profile = atmospheric_model(doy, geometry['lat'])
# Aerosols
# TODO - dynamically adjust AeroProfile?
s.aero_profile = AeroProfile.PredefinedType(AeroProfile.Continental)
self.aod = aodData.get_aod(
geometry['lat'], geometry['lon'], date_time.date()
)
# sixs throws IEEE_UNDERFLOW_FLAG IEEE_DENORMAL for small aod.
# and if using a predefined AeroProfile, visible or aot550 must be
# specified. Small here was determined emprically on my laptop, and
# visible = 1000 km is essentially setting the visibility to infinite.
if self.aod[1] < 0.0103:
s.visible = 1000
else:
s.aot550 = self.aod[1]
# Other settings
s.ground_reflectance = GroundReflectance.HomogeneousLambertian(GroundReflectance.GreenVegetation)
s.atmos_corr = AtmosCorr.AtmosCorrLambertianFromRadiance(1.0)
# Used for testing
funcs = {
'LT5': SixSHelpers.Wavelengths.run_landsat_tm,
'LT7': SixSHelpers.Wavelengths.run_landsat_etm,
# LC8 doesn't seem to work
#'LC8': SixSHelpers.Wavelengths.run_landsat_oli
}
if sensor in funcs.keys():
saved_stdout = sys.stdout
try:
sys.stdout = open(os.devnull, 'w')
wvlens, outputs = funcs[sensor](s)
finally:
sys.stdout = saved_stdout
else:
# Use wavelengths
outputs = []
for wv in wavelengths:
s.wavelength = Wavelength(wv[0], wv[1])
s.run()
outputs.append(s.outputs)
self.results = {}
verbose_out("{:>6} {:>8}{:>8}{:>8}".format('Band', 'T', 'Lu', 'Ld'), 4)
for b, out in enumerate(outputs):
t = out.trans['global_gas'].upward
Lu = out.atmospheric_intrinsic_radiance
Ld = (out.direct_solar_irradiance + out.diffuse_solar_irradiance + out.environmental_irradiance) / numpy.pi
self.results[bandnums[b]] = [t, Lu, Ld]
verbose_out("{:>6}: {:>8.3f}{:>8.2f}{:>8.2f}".format(bandnums[b], t, Lu, Ld), 4)
verbose_out('Ran atmospheric model in %s' % str(datetime.datetime.now() - start), 2)
def __init__(self, bandnums, wavelengths, geometry, date_time, sensor=None):
""" Run SixS atmospheric model using Py6S """
start = datetime.datetime.now()
VerboseOut('Running atmospheric model (6S)', 2)
s = SixS()
# Geometry
s.geometry = Geometry.User()
s.geometry.from_time_and_location(geometry['lat'], geometry['lon'], str(date_time),
geometry['zenith'], geometry['azimuth'])
s.altitudes = Altitudes()
s.altitudes.set_target_sea_level()
s.altitudes.set_sensor_satellite_level()
doy = (date_time - datetime.datetime(date_time.year, 1, 1)).days + 1
# Atmospheric profile
s.atmos_profile = atmospheric_model(doy, geometry['lat'])
# Aerosols
# TODO - dynamically adjust AeroProfile?
s.aero_profile = AeroProfile.PredefinedType(AeroProfile.Continental)
self.aod = aodData.get_aod(geometry['lat'], geometry['lon'], date_time.date())
s.aot550 = self.aod[1]
# Other settings
s.ground_reflectance = GroundReflectance.HomogeneousLambertian(GroundReflectance.GreenVegetation)
s.atmos_corr = AtmosCorr.AtmosCorrLambertianFromRadiance(1.0)
# Used for testing
try:
stdout = sys.stdout
funcs = {
'LT5': SixSHelpers.Wavelengths.run_landsat_tm,
'LT7': SixSHelpers.Wavelengths.run_landsat_etm,
# LC8 doesn't seem to work
#'LC8': SixSHelpers.Wavelengths.run_landsat_oli
}
if sensor in funcs.keys():
sys.stdout = open(os.devnull, 'w')
wvlens, outputs = funcs[sensor](s)
sys.stdout = stdout
else:
# Use wavelengths
outputs = []
for wv in wavelengths:
s.wavelength = Wavelength(wv[0], wv[1])
s.run()
outputs.append(s.outputs)
except Exception, e:
sys.stdout = stdout
raise AtmCorrException("Error running 6S: %s" % e)