def drawTitle(text):
'''Takes in the title text and draws it to the top of the current pad'''
headerText = TText(.5, .95, text)
headerText.SetTextAlign(22)
headerText.Draw()
return headerText
def D1H_txt_to_root(filename, outputpath=''):
from ROOT import TFile, TCanvas, TPad, TH1D, TLatex, TStyle, gStyle, TText, gPad, TPaveText
from inspect import currentframe, getframeinfo
#gStyle.SetOptStat(0)
can = TCanvas("can", "can", 200, 10, 500, 500)
fileroot = filename.replace(".txt", "")
fileroot = fileroot + "_F.root"
f = open(filename, "r")
lineList = f.readlines()
Nbin = (len(lineList)) # get number of bins
Line_string = str(lineList[0])
_, bin_init, _, _ = Line_string.split()
bin_init = float(bin_init) # get initial bin
Line_string = str(lineList[len(lineList) - 1])
_, _, bin_final, _ = Line_string.split()
bin_final = float(bin_final) # get final bin
f.seek(0) # reset python read line
hist = TH1D("h1f", "h1f", Nbin, bin_init, bin_final)
total_e = 0
for i in range(1, Nbin + 1):
Line_string = str(f.readline())
_, _, _, bin_c = Line_string.split()
bin_c = float(bin_c)
hist.SetBinContent(i, bin_c)
total_e = total_e + bin_c
total_e = int(total_e)
hist.Draw()
text = TText(hist.GetXaxis().GetBinCenter(2),
hist.GetYaxis().GetBinCenter(1),
"Recycled. Total Entry : %i" % total_e)
text.SetTextFont(10)
text.Draw()
gPad.Update()
can.Update()
if (outputpath == ''):
wf = TFile(fileroot, "RECREATE")
print(fileroot, " root file is generated !!!")
else:
fileroot = outputpath + "/_processed.root"
wf = TFile(fileroot, "RECREATE")
print(fileroot, " root file is generated !!!")
hist.Write()
wf.Close()
return fileroot
def D1H_txt_to_roothist(filename, outputpath=''):
from ROOT import TFile, TCanvas, TPad, TH1D, TLatex, TStyle, gStyle, TText, gPad, TPaveText
from inspect import currentframe, getframeinfo
import os
#gStyle.SetOptStat(0)
can = TCanvas("can", "can", 200, 10, 500, 500)
if (filename[0] == "/"):
filename = filename
else:
filename = os.getcwd(
) + "/" + filename # get the path included filename
loca = len(filename)
for i in range(1, len(filename) + 1): # find the "/" location
if (filename[-i] == "/"):
loca = i - 1
break
FILENAME = filename.replace(filename[:-loca],
"") # this is the shorten filename
# print(FILENAME, "******")
fileroot = filename.replace(".txt", "_F.root")
fileroot = fileroot.replace("//", "/")
f = open(filename, "r")
lineList = f.readlines()
Nbin = (len(lineList)) # get number of bins
Line_string = str(lineList[0])
_, bin_init, _, _ = Line_string.split()
bin_init = float(bin_init) # get initial bin
Line_string = str(lineList[len(lineList) - 1])
_, _, bin_final, _ = Line_string.split()
bin_final = float(bin_final) # get final bin
f.seek(0) # reset python read line
hist = TH1D("hist", "hist", Nbin, bin_init, bin_final)
total_e = 0
for i in range(1, Nbin + 1):
Line_string = str(f.readline())
_, _, _, bin_c = Line_string.split()
bin_c = float(bin_c)
hist.SetBinContent(i, bin_c)
total_e = total_e + bin_c
total_e = int(total_e)
hist.Draw()
text = TText(hist.GetXaxis().GetBinCenter(2),
hist.GetYaxis().GetBinCenter(1),
"Recycled. Total Entry : %i" % total_e)
text.SetTextFont(10)
text.Draw()
gPad.Update()
can.Update()
if (outputpath == ''):
wf = TFile(fileroot, "RECREATE")
print(fileroot, " root file is generated !!!")
else:
if (outputpath[0] == "/"):
fileroot = outputpath + "/" + FILENAME.replace(".txt", "_F.root")
fileroot = fileroot.replace("//", "/")
elif (outputpath[0] == "~"):
fileroot = outputpath.replace(
"~", os.environ['HOME']) + "/" + FILENAME.replace(
".txt", "_F.root")
fileroot = fileroot.replace("//", "/")
else:
fileroot = os.getcwd() + "/" + outputpath + "/" + FILENAME.replace(
".txt", "_F.root")
fileroot = fileroot.replace("//", "/")
wf = TFile(fileroot, "RECREATE")
print(fileroot, " root file is generated !!!")
hist.Write()
wf.Close()
fileroot = fileroot.replace("//", "/")
# print(fileroot)
return fileroot
ar1.DrawArrow(.50, .275, .59, .275, 0.015, '|>')
ar1.DrawArrow(.70, .275, .79, .275, 0.015, '|>')
ar1.DrawArrow(.45, .175, .54, .175, 0.015, '|>')
ar1.DrawArrow(.43, .075, .54, .075, 0.015, '|>')
ar1.DrawArrow(.41, -.025, .54, -.025, 0.015, '|>')
ldot = TLine(.95, .92, .99, .92)
ldot.SetLineStyle(3)
ldot.Draw()
ldot.DrawLine(.9, .775, .99, .775)
ldot.DrawLine(.9, .275, .99, .275)
ldot.DrawLine(.55, .05, .55, 0)
ldot.DrawLine(.9, .05, .75, 0)
pname = TText(.46, .21, 'fEventOffset')
pname.SetTextFont(72)
pname.SetTextSize(0.018)
pname.Draw()
pname.DrawText(.44, .11, 'fBuffer')
pname.DrawText(.42, .01, 'fZipBuffer')
pname.DrawText(.26, .81, 'fLeaves = TObjArray of TLeaf')
pname.DrawText(.24, .40, 'fBasketEvent')
pname.DrawText(.22, .31, 'fBaskets = TObjArray of TBasket')
pname.DrawText(.20, 1.0, 'fBranches = TObjArray of TBranch')
ntleaf = TPaveText(0.30, .42, .62, .7)
ntleaf.SetTextSize(0.014)
ntleaf.SetFillColor(leafcolor)
ntleaf.SetTextAlign(12)
ntleaf.AddText('fLen: number of fixed elements')
ntleaf.AddText('fLenType: number of bytes of data type')
ntleaf.AddText('fOffset: relative to Leaf0-fAddress')
ntleaf.AddText('fNbytesIO: number of bytes used for I/O')
ntleaf.AddText('fIsPointer: True if pointer')
file.AddText('Header')
arrow = TArrow(6, 20.5, 17, 20.5, 0.02, '|>')
arrow.SetFillStyle(1001)
arrow.SetLineWidth(2)
arrow.Draw()
free = TPaveText(8, 20, 11, 21)
free.SetFillColor(18)
free.Draw()
free.AddText('First:Last')
free2 = TPaveText(12, 20, 15, 21)
free2.SetFillColor(18)
free2.Draw()
free2.AddText('First:Last')
tfree = TText(6.2, 21.2, 'fFree = TList of free blocks')
tfree.SetTextSize(0.02)
tfree.Draw()
tkeys = TText(5.2, 18.2, 'fKeys = TList of Keys')
tkeys.SetTextSize(0.02)
tkeys.Draw()
tmemory = TText(3.2, 15.2, 'fListHead = TList of Objects in memory')
tmemory.SetTextSize(0.02)
tmemory.Draw()
arrow.DrawArrow(5, 17, 17, 17, 0.02, '|>')
line = TLine(5, 19, 5, 17)
line.SetLineWidth(2)
line.Draw()
key0 = TPaveText(7, 16, 10, 18)
key0.SetTextSize(0.04)
key0.SetFillColor(keycolor)
key0.AddText('Key 0')
h_2_6.Fill(float(t_run)/60.)
c1 = TCanvas("c1","Root Canvas",40,20,800,600)
gStyle.SetOptStat(111111)
h_1.SetFillColor(36)
h_1.GetYaxis().SetTitleOffset(1.2)
h_1.SetYTitle('Entries')
h_1.SetXTitle('Time, s')
c1.SetLogy()
h_1.Draw()
t_task = TText(0.35,0.8,'Task '+ task + " SIGNET" )
t_task.SetNDC()
t_task.Draw()
#print time stamp
t_time = datetime.now()
t_label = 'SP ' + t_time.strftime("%Y-%m-%d")
t = TText(0.905,0.6,t_label)
t.SetNDC()
t.SetTextAlign(21) # middle, bottom
t.SetTextAngle(-90)
t.SetTextSize(0.017)
t.Draw()
c1.Modified()
c1.Update()
arrow.SetFillStyle( 1001 ) arrow.Draw() line.DrawLine( 7, 8.5, 7, 8.0 ) line.DrawLine( 7, 8.0, 10.6, 8 ) arrow.DrawArrow( 10.6,8, 10.6, 8.4, 0.01, '|>' ) line.DrawLine( 10.6, 11, 10.6, 11.5 ) line.DrawLine( 10.6, 11.5, 14.6, 11.5 ) arrow.DrawArrow( 14.6, 11.5, 14.6, 11.1, 0.01, '|>' ) line.DrawLine( 14.6, 8.5, 14.6, 8.0 ) line.DrawLine( 14.6, 8.0, 16, 8 ) ldot.DrawLine( 16, 8, 19, 8 ) vert = TText( 1.5, 9.75, 'File' ) vert.SetTextAlign( 21 ) vert.SetTextAngle( 90 ) vert.SetTextSize( 0.025 ) vert.Draw() vert.DrawText( 2.0, 9.75, 'Header' ) vert.DrawText( 2.9, 9.75, 'Logical Record' ) vert.DrawText( 3.2, 9.75, 'Header' ) vert.DrawText( 7.3, 9.75, 'Logical Record' ) vert.DrawText( 7.6, 9.75, 'Header' ) vert.DrawText( 10.9, 9.75, 'Logical Record' ) vert.DrawText( 11.2, 9.75, 'Header' ) vert.DrawText( 14.9, 9.75, 'Logical Record' ) vert.DrawText( 15.2, 9.75, 'Header' ) hori = TText( 4.75, 10, 'Object' ) hori.SetTextAlign( 22 ) hori.SetTextSize( 0.035 ) hori.Draw() hori.DrawText( 4.75, 9.5, 'Data' ) hori.DrawText( 9.2, 10, 'Deleted' )
def MCSPlot(self, pname):
#print self.fname
f = TFile(self.fname)
self.RMS = {}
self.RMSErr = {}
self.Chi2 = {}
self.RMSsysdiff = {}
self.RMSsyserr = {}
# create a plot for each histvarname
for histvar in self.histvarnames:
self.RMS[histvar] = {}
self.RMSErr[histvar] = {}
self.RMSsysdiff[histvar] = {}
self.RMSsyserr[histvar] = {}
self.Chi2[histvar] = {}
names = [histvar + '_' + x for x in self.histstatenames]
print names
hists = [f.Get(histvar + '_' + x) for x in self.histstatenames]
print hists[0]
hists[0].SetTitle("")
# hists[3].Scale(norm)
# self.formatHist(hist[0], 0)
resplots = [x.Clone() for x in hists]
resplots[0].SetTitle('')
resplots[0].GetYaxis().SetTitle("Normalized Residuals")
# if histvar == 'thetaScatt':
leg = TLegend(0.55, 0.73, 0.89, 0.92)
leg.SetLineColor(10)
# else:
# leg = TLegend(0.35,0.2,0.65,0.5)
for i in range(len(self.histstatedesc)):
hists[i].Sumw2()
if histvar == 'theta2Scatt':
hists[i].Rebin(8)
resplots[i].Rebin(8)
elif histvar == 'thetaScatt':
hists[i].Rebin(1)
resplots[i].Rebin(1)
else:
hists[i].Rebin(1)
resplots[i].Rebin(1)
self.formatHists(hists[i], i)
self.formatHists(resplots[i], i)
self.addToRMS(i, hists[i], hists[0], resplots[i], histvar)
if histvar == 'theta2Scatt':
hists[i].GetYaxis().SetTitle('Probability per ' + str(
round(1000 * 1000 *
hists[i].GetXaxis().GetBinWidth(4), 2)) +
' mrad^{2}')
else:
hists[i].GetYaxis().SetTitle('Probability per ' + str(
round(1000 * hists[i].GetXaxis().GetBinWidth(4), 2)) +
' mrad')
leg.AddEntry(hists[i], self.histstatedesc[i], self.histopts[i])
#print hists[0]
self.calculateChi2(i, hists[i], hists[0], resplots[i], histvar,
pname)
c = TCanvas(self.fname[:-5] + '_' + histvar + '_c1')
if self.desc[0] == 'XePion':
t1 = TText(0.18, 0.885, "MICE ISIS cycle 2015/03")
t2 = TText(0.18, 0.85,
"Xe, " + self.desc[1][2:5] + ", MAUS v3.1.2")
else:
t1 = TText(0.18, 0.885, "MICE ISIS cycle 2015/04")
t2 = TText(0.18, 0.85,
"LiH, " + self.desc[1][2:5] + ", MAUS v3.1.2")
t1.SetNDC(1)
t1.SetTextSize(0.04)
t1.SetTextFont(42)
t2.SetNDC(1)
t2.SetTextSize(0.03)
t2.SetTextFont(42)
hists[0].GetYaxis().SetRangeUser(4e-4, 2.0)
hists[0].SetTitle(";" + hists[0].GetXaxis().GetTitle() +
" (radians);" + hists[0].GetYaxis().GetTitle())
hists[0].Draw('ep')
c.SetBottomMargin(0.15)
c.SetTopMargin(0.075)
for h in hists[1:len(self.histstatedesc)]:
h.Draw('epsame')
leg.SetTextSize(0.04)
leg.Draw('same')
t1.Draw()
t2.Draw()
c.SetLogy()
c.SaveAs(pname + '_' + self.fname[:-5] + '_' + histvar +
'_sys.eps')
c.SaveAs(pname + '_' + self.fname[:-5] + '_' + histvar +
'_sys.root')
c.SaveAs(pname + '_' + self.fname[:-5] + '_' + histvar +
'_sys_pq.jpg')
c.Clear()
c.SetLogy(0)
resplots[0].GetYaxis().SetRangeUser(-2, 2)
resplots[0].SetTitle(";" + resplots[0].GetXaxis().GetTitle() +
" (radians);" +
resplots[0].GetYaxis().GetTitle())
leg.SetX1NDC(0.5)
leg.SetX2NDC(0.89)
leg.SetY1NDC(0.2)
leg.SetY2NDC(0.4)
resplots[0].Draw("p")
for r in resplots:
r.Draw('psame')
leg.SetTextSize(0.04)
leg.Draw('same')
t1.Draw()
t2.Draw()
# pblock.Draw()
c.SaveAs(pname + '_' + self.fname[:-5] + '_' + histvar +
'_sys_res_T.eps')
c.SaveAs(pname + '_' + self.fname[:-5] + '_' + histvar +
'_sys_res_pq.jpg')
momhist = f.Get("cor_mom")
#mom = [momhist.GetMean() + 19.468, momhist.GetMeanError()]
#if self.fname.find("LiHMuon_03172") >= 0:
# mom = [momhist.GetMean()*1.107 + 1.05, momhist.GetMeanError()]
#elif self.fname.find("LiHMuon_03200") >= 0:
# mom = [momhist.GetMean()*1.104 + 1.139, momhist.GetMeanError()]
#elif self.fname.find("LiHMuon_03240") >= 0:
# mom = [momhist.GetMean()*1.17 - 9.41, momhist.GetMeanError()]
if self.fname.find("LiHMuon_03172") >= 0:
mom = [momhist.GetMean(), momhist.GetMeanError()]
elif self.fname.find("LiHMuon_03200") >= 0:
mom = [momhist.GetMean(), momhist.GetMeanError()]
elif self.fname.find("LiHMuon_03240") >= 0:
mom = [momhist.GetMean(), momhist.GetMeanError()]
rms = [momhist.GetRMS(), momhist.GetRMSError()]
summary = []
syssummary = []
def sigfig(x):
if math.fabs(x) > 1e-5:
return int(math.ceil(math.fabs(math.log(math.fabs(x), 10))))
else:
return 1
# syssummary.append("p (MeV/c) & "+self.histvarnames[0]+"&"+self.histvarnames[1]+"&"+self.histvarnames[3]+"\\\\")
if pname != "Truth":
for sys in self.sysFiles:
# if sys[3] == 'Material': stindx = 1
# else:
stindx = 0
# print sys[3], self.histstatenames[stindx]
difference0 = self.RMSsysdiff[self.histvarnames[0]][
self.histstatenames[stindx]][sys[3]]
difference1 = self.RMSsysdiff[self.histvarnames[1]][
self.histstatenames[stindx]][sys[3]]
difference3 = self.RMSsysdiff[self.histvarnames[3]][
self.histstatenames[stindx]][sys[3]]
syserr0 = self.RMSsyserr[self.histvarnames[0]][
self.histstatenames[stindx]][sys[3]]
syserr1 = self.RMSsyserr[self.histvarnames[1]][
self.histstatenames[stindx]][sys[3]]
syserr3 = self.RMSsyserr[self.histvarnames[3]][
self.histstatenames[stindx]][sys[3]]
relerr0 = syserr0 / self.RMS[self.histvarnames[0]][
self.histstatenames[0]]
relerr1 = syserr1 / self.RMS[self.histvarnames[1]][
self.histstatenames[0]]
relerr3 = syserr3 / self.RMS[self.histvarnames[3]][
self.histstatenames[0]]
syssummary.append(str(round(mom[0],sigfig(mom[1])))+"$\pm$"+str(round(mom[1],sigfig(mom[1])))+\
" & "+str(round(difference0,sigfig(difference0)))+\
" & "+str(round(syserr0,sigfig(syserr0)))+\
" & "+str(round(relerr0,sigfig(relerr0)))+\
" & "+str(round(difference1,sigfig(difference1)))+\
" & "+str(round(syserr1,sigfig(syserr1)))+\
" & "+str(round(relerr1,sigfig(relerr1)))+\
" & "+str(round(difference3,sigfig(difference3)))+\
" & "+str(round(syserr3,sigfig(syserr3)))+\
" & "+str(round(relerr3,sigfig(relerr3)))+"\\\\")
# print syssummary[-1]
syssummary.append(str(round(mom[0],2))+"$\pm$"+str(round(mom[1],2))+\
" & "+ str(round(rms[0],2))+"$\pm$"+str(round(rms[1],2))+\
" & "+str(round(self.RMSsysdiff[self.histvarnames[0]][self.histstatenames[0]]['Sum'],2))+\
" & "+str(round(self.RMSsyserr[self.histvarnames[0]][self.histstatenames[0]]['Sum'],2))+\
" & "+str(round(self.RMSsyserr[self.histvarnames[0]][self.histstatenames[0]]['Sum']/self.RMS[self.histvarnames[0]][self.histstatenames[0]],2))+\
" & "+str(round(self.RMSsysdiff[self.histvarnames[1]][self.histstatenames[0]]['Sum'],2))+\
" & "+str(round(self.RMSsyserr[self.histvarnames[1]][self.histstatenames[0]]['Sum'],2))+\
" & "+str(round(self.RMSsyserr[self.histvarnames[1]][self.histstatenames[0]]['Sum']/self.RMS[self.histvarnames[1]][self.histstatenames[0]],2))+\
" & "+str(round(self.RMSsysdiff[self.histvarnames[3]][self.histstatenames[0]]['Sum'],2))+
" & "+str(round(self.RMSsyserr[self.histvarnames[3]][self.histstatenames[0]]['Sum'],2))+
" & "+str(round(self.RMSsyserr[self.histvarnames[3]][self.histstatenames[0]]['Sum']/self.RMS[self.histvarnames[2]][self.histstatenames[0]],2))+"\\\\")
# summary.append("p (MeV/c) & &"+str(self.histstatenames[0])+" & "+str(self.histstatenames[1])+" & $\chi^{2}$/ndf & "+
# +str(self.histstatenames[2])+" & $\chi^{2}$/ndf \\\\")
# print mom, self.RMS, self.RMSErr, self.Chi2
for histvar in self.histvarnames:
summary.append(str(round(mom[0],2))+"$\pm$"+str(round(mom[1],2))+\
"& $\ "+histvar+"$ & "+str(round(self.RMS[histvar][self.histstatenames[0]],2))+ \
"$\pm$"+str(round(self.RMSErr[histvar][self.histstatenames[0]],2))+ \
"$\pm$"+str(round(self.RMSsyserr[histvar][self.histstatenames[0]]["Sum"],2))+ \
" & "+str(round(self.RMS[histvar][self.histstatenames[1]],2))+ \
"$\pm$"+str(round(self.RMSErr[histvar][self.histstatenames[1]],2))+ \
# "$\pm$"+str(round(self.RMSsyserr[histvar][self.histstatenames[1]]["Sum"],2))+\
" & "+str(round(self.Chi2[histvar][self.histstatenames[1]][0],1))+ \
" / "+ str(self.Chi2[histvar][self.histstatenames[1]][1])+ \
" & "+str(round(self.RMS[histvar][self.histstatenames[2]],2))+ \
"$\pm$"+str(round(self.RMSErr[histvar][self.histstatenames[2]],2))+ \
#"$\pm$"+str(round(self.RMSsyserr[histvar][self.histstatenames[2]]["Sum"],2))+\
" & "+str(round(self.Chi2[histvar][self.histstatenames[2]][0],1))+ \
" / "+ str(self.Chi2[histvar][self.histstatenames[2]][1])
+"\\\\")
# print summary[-1]
f.Close()
return [summary, syssummary]
class photon_detector(object):
#_____________________________________________________________________________
def __init__(self):
#length, height and distance of the front side from the origin, all in m
self.length = 8.
self.height = 0.15
self.dist = 23.2
self.angle = -0.025 # rotation to be on electron beam axis
#_____________________________________________________________________________
def rotate(self, theta):
#rotate by angle theta about the origin
self.angle += theta
#_____________________________________________________________________________
def draw_2d(self):
#make corner points
vec = []
vec.append(TVector2(self.length / 2, -self.height / 2))
vec.append(TVector2(-self.length / 2, -self.height / 2))
vec.append(TVector2(-self.length / 2, self.height / 2))
vec.append(TVector2(self.length / 2, self.height / 2))
#rotate and translate along electron beam
vtrans = TVector2(-1, 0).Rotate(self.angle)
vtrans.SetMagPhi(self.dist + self.length / 2, vtrans.Phi())
for i in xrange(len(vec)):
vec[i] = vec[i].Rotate(self.angle)
vec[i] += vtrans
#last point same as the first
vec.append(vec[0])
self.geom = TGraph(len(vec))
self.geom.SetLineWidth(2)
self.geom.SetLineColor(rt.kYellow + 1)
self.geom.SetFillColor(rt.kYellow)
for i in xrange(len(vec)):
self.geom.SetPoint(i, vec[i].X(), vec[i].Y() * 100)
self.geom.Draw("lfsame")
#label
self.label = TText(vtrans.X(),
(vtrans.Y() - self.height / 2 - 0.11) * 100 - 3,
"Lumi detector")
self.label.SetTextSize(0.03)
#self.label.SetTextAngle(90)
#self.label.SetTextAlign(32)
self.label.SetTextAlign(23)
self.label.Draw("same")
#label for low Q^2 tagger
self.label_tag = TText(vtrans.X() + 2, (vtrans.Y() + 0.6) * 100 - 3,
"Place for low-Q2 tagger")
self.label_tag.SetTextSize(0.03)
#self.label.SetTextAngle(90)
#self.label.SetTextAlign(32)
self.label_tag.SetTextAlign(23)
self.label_tag.Draw("same")
f.seek(0) # reset python read line
hist = TH1D("h1f","h1f",Nbin,bin_init,bin_final)
total_e = 0
for i in range(1,Nbin+1):
Line_string = str(f.readline())
_,_,bin_c = Line_string.split();
bin_c = float(bin_c)
hist.SetBinContent(i,bin_c)
total_e = total_e + bin_c
total_e = int(total_e)
hist.Draw()
print(hist.GetMaximumBin())
text = TText(hist.GetXaxis().GetBinCenter(2), hist.GetYaxis().GetBinCenter(1), "Recycled. Total Entry : %i" %total_e)
text.SetTextFont(10)
text.Draw()
gPad.Update()
can.Update()
'''
pave1 = TPaveText(0.1,0.1,0.9,0.98);
pave1.SetFillColor(42);
pave1.AddText("Recycled")
pave1.Draw()
gPad.Update()
can.Update()
'''
'''
## I have tried to modified and upload the stats box, but failed.. is this differenct from C++??
#ps = can.GetPrimitive("stats") # TPaveStats
def StraightLine( opt="" ):
from ConstrainedFit import clsq
from numpy import matrix, zeros
# Data, errors and correlations:
xdata= [ 1.0, 3.0, 5.0, 7.0, 9.0, 11.0, 13.0 ]
ydata= [ 3.0, 2.5, 3.0, 5.0, 7.0, 5.5, 7.5 ]
xerrs= [ 0.5, 0.3, 0.3, 0.5, 0.5, 0.3, 0.3 ]
yerrs= [ 0.7, 1.0, 0.5, 0.7, 0.7, 1.0, 0.7 ]
xyrho= [ -0.25, 0.5, 0.5, -0.25, 0.25, 0.95, -0.25 ]
#xyrho= [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ]
covm= matrix( zeros( (14,14) ) )
data= []
npoints= len(xdata)
for i in range( npoints ):
subcovm= matrix( [ [ xerrs[i]**2, xyrho[i]*xerrs[i]*yerrs[i] ],
[ xyrho[i]*xerrs[i]*yerrs[i], yerrs[i]**2 ] ] )
covm[2*i:2*i+2,2*i:2*i+2]= subcovm
data.append( xdata[i] )
data.append( ydata[i] )
print( covm )
print( data )
# Fit parameters for straight line:
upar= [ 1.0, 0.5 ]
upnames= { 0: "a", 1: "b" }
# or parabola, see possible mpar[.]**2 term in constraints
#upar= [ 0.0, 1.0, 1.0 ]
#upnames= { 0: "a", 1: "b", 2: "c" }
# Constraint function forces y_i = a + b*x_i for every
# pair of measurements x_i, y_i:
def straightlineConstraints( mpar, upar ):
constraints= []
for i in range( npoints ):
constraints.append( upar[0] + upar[1]*mpar[2*i]
# + upar[2]*mpar[2*i]**2
- mpar[2*i+1] )
return constraints
# Setup the solver and solve:
solver= clsq.clsqSolver( data, covm, upar, straightlineConstraints,
uparnames=upnames )
print( "Constraints before solution" )
print( solver.getConstraints() )
lBlobel= False
lCorr= False
if "b" in opt:
lBlobel= True
if "corr" in opt:
lCorr= True
solver.solve( lBlobel=lBlobel )
ca= clsq.clsqAnalysis( solver )
ca.printResults( corr=lCorr )
if "m" in opt:
_doMinosAll( solver, "u" )
global tg, lell, tf, tt, canvc, canvp
from ROOT import TGraph, TF1, TText, TCanvas
if "cont" in opt:
canvc= TCanvas( "canv", "Chi^2 Contours", 600, 600 )
_doProfile2d( solver, ipar1=0, type1="u", ipar2=1, type2="u" )
# Plot:
from array import array
xarr= array( "f", xdata )
yarr= array( "f", ydata )
tg= TGraph( npoints, xarr, yarr )
tg.SetMarkerStyle( 20 )
tg.SetMinimum( 0.0 )
tg.SetMaximum( 9.0 )
tg.SetTitle( "straight line 2D fit" )
xa= tg.GetXaxis()
ya= tg.GetYaxis()
xa.SetTitle( "X" )
ya.SetTitle( "Y" )
canvp= TCanvas( "canp", "Straight line 2D fit", 600, 400 )
tg.Draw( "ap" )
lell= []
for i in range( npoints ):
te= _makeEllipse( xdata[i], ydata[i], xerrs[i], yerrs[i], xyrho[i] )
lell.append( te )
te.Draw( "s" )
solution= solver.getUpars()
tf= TF1( "tf", "[0]+[1]*x", 0.0, 15.0 )
for i in range( len(upar) ):
tf.SetParameter( i, solution[i] )
tf.SetParName( 0, upnames[i] )
tf.Draw( "same" )
tt= TText( 1, 8, "y= a + b*x" )
tt.Draw( "same" )
return