def IMPModuleBuild(env, version=None, required_modules=[],
lib_only_required_modules=[],
optional_modules=[],
lib_only_optional_modules=[],
optional_dependencies=[], config_macros=[],
module=None, module_libname=None,
module_pylibname=None,
module_include_path=None, module_preproc=None,
module_namespace=None, module_nicename=None,
required_dependencies=[],
alias_name=None,
cxxflags=[], cppdefines=[], cpppath=[], python_docs=False,
local_module=False,
standards=True):
if env.GetOption('help'):
return
dta= scons_tools.data.get(env)
if module is None:
module=Dir('.').abspath.split('/')[-1]
if module=="local":
module=Dir('.').abspath.split('/')[-2]+"_local"
if not module_libname and (module != module.lower() or module.find("-") != -1):
scons_tools.utility.report_error("Module names can only have lower case characters and numbers")
if module_libname is None:
module_libname="imp_"+module
if module_pylibname is None:
module_pylibname="_IMP_"+module
if module_include_path is None:
module_include_path="IMP/"+module
if module_namespace is None:
module_namespace="IMP::"+module
if module_preproc is None:
module_preproc=module_namespace.replace("::","_").upper()
if module_nicename is None:
module_nicename= "IMP."+module
if alias_name is None:
alias_name=module
if python_docs:
env.Append(IMP_PYTHON_DOCS=[module])
optm=optional_modules+lib_only_optional_modules
optd=optional_dependencies
reqd=required_dependencies
reqm=required_modules+lib_only_required_modules
all_sconscripts=stp.get_sconscripts(env, ['data', 'examples'])
nenv = scons_tools.utility.configure_module(env,
module, alias_name,
module_libname,
version,
required_modules=reqm,
optional_dependencies=optd,
optional_modules=optm,
required_dependencies= reqd)
if not nenv:
return
preclone=env
env = nenv
vars={'module_include_path':module_include_path,
'module':module,
'PREPROC':module_preproc,
'EXPORT':module_preproc.replace("_", ""),
'namespace':module_namespace,
'module_libname':module_libname,
'module_pylibname':module_pylibname,
'module_nicename':module_nicename,
'module_alias':alias_name}
env['IMP_MODULE_VARS']=vars
build_config=[]
if cxxflags:
env.Replace(CXXFLAGS=cxxflags)
if cppdefines:
env.Append(CPPDEFINES=cppdefines)
if cpppath:
env.Append(CPPPATH=cpppath)
#if len(found_optional_modules + found_optional_dependencies)>0:
# print " (using " +", ".join(found_optional_modules + found_optional_dependencies) +")"
real_config_macros=config_macros[:]
#print "config", module, real_config_macros
env['IMP_MODULE_CONFIG']=real_config_macros
for s in all_sconscripts:
env.SConscript(s, exports='env')
if env['IMP_PASS']=="BUILD":
dta.add_to_alias("all", _get_module_alias(env))
# needed for data
for m in _get_module_modules(env):
env.Requires(dta.get_alias(_get_module_alias(env)),
dta.get_alias(dta.modules[m].alias))
if standards:
root=Dir(".").abspath
if env.get('repository', None):
old=Dir("#").abspath
#print old, root, env['repository']
root=root.replace(old, Dir(Dir("#").abspath+"/"+env['repository']).abspath)
scons_tools.standards.add(env, [root+"/"+x for x in ["include/*.h",
"include/internal/*.h",
"src/*.cpp",
"src/internal/*.cpp",
"test/*.py",
"bin/*.cpp"]])
return env
def IMPSystem(env, name=None, version=None,
authors=[],
brief="", overview="",
publications=None,
license="standard",
required_modules=[],
optional_dependencies=[],
required_dependencies=[],
extra_data=[],
testable=False,
parallelizable=False,
last_imp_version="unknown",
python=True):
if not name:
name= Dir(".").abspath.split("/")[-1]
if env.GetOption('help'):
return
dirs = scons_tools.paths.get_sconscripts(env)
local_module=False
for d in dirs:
env.SConscript(d, exports=['env'])
(nenv, version, found_optional_modules, found_optional_dependencies) =\
utility.configure(env, name, "system", version,
required_modules=required_modules,
optional_dependencies=optional_dependencies,
required_dependencies= required_dependencies)
if not nenv:
data.get(env).add_application(name, ok=False)
return
else:
if nenv["IMP_PASS"] != "RUN":
return
lkname="system_"+name.replace(" ", "_").replace(":", "_")
pre="\page "+lkname+" "+name
extrasections=[]
if testable:
extrasections.append(("Testable", "Yes"))
else:
extrasections.append(("Testable", "No"))
if parallelizable:
extrasections.append(("Parallelizeable", "Yes"))
else:
extrasections.append(("Parallelizeable", "No"))
if last_imp_version != "unknown":
extrasections.append(("Last known good \imp version", last_imp_version))
else:
vtxt= "\n\\section lkgversion Last known good IMP version\n"+\
"unknown"+"\n"
data.get(env).add_system(name, link="\\ref "+lkname+' "'+name+'"',
dependencies=required_dependencies\
+found_optional_dependencies,
unfound_dependencies=[x for x in optional_dependencies
if not x in
found_optional_dependencies],
modules= required_modules+found_optional_modules,
version=version)
for d in dirs:
if str(d).split("/")[0] != "local":
env.SConscript(d, exports=['env'])
scons_tools.data.get(env).add_to_alias("all", env.Alias(name))
env= nenv
for m in required_modules+found_optional_modules:
env.Depends(scons_tools.data.get(env).get_alias(name),
scons_tools.data.get(env).get_alias(m))
if testable:
samples= Glob("sample_[0123456789]*.py")
samples.sort(utility.file_compare)
analysis= Glob("analyze_[0123456789]*.py")
analysis.sort(utility.file_compare)
tt= []
tests = test.add_tests(env, samples+analysis, "system")
for t in tests:
env.Depends(t, scons_tools.data.get(env).get_alias(name))
# link files in build dir
allfiles= []
for suff in ["*.txt", "*.mrc", "*.pdb", ".py", ".param", ".input", ".lib"]:
allfiles.extend(Glob("*/*"+suff))
allfiles.extend(Glob("*"+suff))
for f in allfiles+extra_data:
inst=install.install(env, "biological_systems/"+name+"/", f)
scons_tools.data.get(env).add_to_alias(env.Alias(name), inst)
#if f.path.endswith(".py"):
# example.add_python_example(env, f, f.path)
#env.AlwaysBuild(install)
doc.add_doc_page(env, "\\page "+lkname+" "+name.capitalize(),
authors, version,
brief, overview,
publications,
license, extra_sections=extrasections)
return env
