Exemple #1
0
            true_group_str += true_name
            if inferred_name == 'none':
                print ' none',
            elif  inferred_name == true_name:
                print '  -  ',
            else:
                print '  x  ',
        for region in utils.regions:
            print '%3d' % searcher.n_tries[region],
        print ''
        print '  true'
        utils.print_reco_event(germlines, inline, -1, -1)
        if searcher.all_matched():
            print '  inferred'
            try:
                searcher.build_inferred_seq(inline['seq'], germlines, outline)
                utils.print_reco_event(germlines, outline, -1, -1)
            except:
                print '   *something* is wrong!'
                print '    ',searcher.best_matches['v']
                print '    ',searcher.best_matches['d']
                print '    ',searcher.best_matches['j']
                continue
        else:
            print 'no matches!'
            print '    ',searcher.best_matches['v']
            print '    ',searcher.best_matches['d']
            print '    ',searcher.best_matches['j']
#            sys.exit()

        break