true_group_str += true_name if inferred_name == 'none': print ' none', elif inferred_name == true_name: print ' - ', else: print ' x ', for region in utils.regions: print '%3d' % searcher.n_tries[region], print '' print ' true' utils.print_reco_event(germlines, inline, -1, -1) if searcher.all_matched(): print ' inferred' try: searcher.build_inferred_seq(inline['seq'], germlines, outline) utils.print_reco_event(germlines, outline, -1, -1) except: print ' *something* is wrong!' print ' ',searcher.best_matches['v'] print ' ',searcher.best_matches['d'] print ' ',searcher.best_matches['j'] continue else: print 'no matches!' print ' ',searcher.best_matches['v'] print ' ',searcher.best_matches['d'] print ' ',searcher.best_matches['j'] # sys.exit() break