def __init__(self, tracker, renderer,
transformers = None ):
'''render images using an instance of a :class:`Tracker.Tracker`
to obtain data, an optional :class:`Transformer` to transform
the data and a :class:`Renderer.Renderer` to render the output.
'''
Component.__init__(self)
self.debug("starting dispatcher '%s': tracker='%s', renderer='%s', transformer:='%s'" % \
(str(self), str(tracker), str(renderer), str(transformers) ) )
self.tracker = tracker
# add reference to self for access to tracks
self.tracker.dispatcher = self
self.renderer = renderer
self.transformers = transformers
try:
if tracker.cache:
self.cache = Cache.Cache( Cache.tracker2key(tracker) )
else:
self.cache = {}
except AttributeError:
self.cache = Cache.Cache( Cache.tracker2key(tracker) )
self.data = DataTree.DataTree()
# Level at which to group the results of Renderers
# None is no grouping
# 0: group on first level ('groupby=track')
# 1: group on second level ('groupby=slice')
# n: group on n-th level
self.group_level = 1
def __init__(self, tracker, renderer, transformers=None):
"""render images using an instance of a :class:`Tracker.Tracker`
to obtain data, an optional :class:`Transformer` to transform
the data and a :class:`Renderer.Renderer` to render the output.
"""
Component.__init__(self)
self.debug(
"starting dispatcher '%s': tracker='%s', renderer='%s', transformer:='%s'"
% (str(self), str(tracker), str(renderer), str(transformers))
)
self.tracker = tracker
# add reference to self for access to tracks
self.tracker.dispatcher = self
self.renderer = renderer
self.transformers = transformers
try:
if tracker.cache:
self.cache = Cache.Cache(Cache.tracker2key(tracker))
else:
self.cache = {}
except AttributeError:
self.cache = Cache.Cache(Cache.tracker2key(tracker))
self.data = DataTree.DataTree()
def GET(self, tracker):
cache = Cache.Cache(tracker, mode="r")
data = DataTree.fromCache(cache)
table, row_headers, col_headers = DataTree.tree2table(data)
return render.data_table(table, row_headers, col_headers)
##########################################################
## instantiate tracker, dispatcher, renderer and transformers
## and collect output
###########################################################
try:
########################################################
# find the tracker
logging.debug( "report_directive.run: collecting tracker %s." % reference )
code, tracker = Utils.makeTracker( reference )
if not tracker:
logging.debug( "report_directive.run: no tracker - no output from %s " % str(document) )
raise ValueError( "tracker `%s` not found" % reference )
logging.debug( "report_directive.run: collected tracker." )
tracker_id = Cache.tracker2key( tracker )
########################################################
# determine the transformer
logging.debug( "report_directive.run: creating transformers." )
transformers = Utils.getTransformers( transformer_names, **transformer_options )
########################################################
# determine the renderer
logging.debug( "report_directive.run: creating renderer." )
if renderer_name == None:
raise ValueError("the report directive requires a renderer.")
renderer = Utils.getRenderer( renderer_name, **renderer_options )
def run(arguments, options, lineno, content, state_machine=None, document=None, srcdir=None, builddir=None):
"""process :report: directive.
*srdir* - top level directory of rst documents
*builddir* - build directory
"""
tag = "%s:%i" % (str(document), lineno)
logging.debug("report_directive.run: profile: started: rst: %s" % tag)
# sort out the paths
# reference is used for time-stamping
tracker_name = directives.uri(arguments[0])
basedir, fname, basename, ext, outdir, codename, notebookname = Utils.buildPaths(tracker_name)
# get the directory of the rst file
rstdir, rstfile = os.path.split(document) # state_machine.document.attributes['source'])
# root of document tree
if srcdir is None:
srcdir = setup.srcdir
# build directory
if builddir is None:
builddir = setup.confdir
# remove symbolic links
srcdir, builddir, rstdir = [os.path.realpath(x) for x in (srcdir, builddir, rstdir)]
# there are three directories:
# builddir = directory where document is built in (usually _build/html or similar)
# rstdir = directory where rst sources are located
# srcdir = directory from which the build process is started
# path to root relative to rst
rst2srcdir = os.path.join(os.path.relpath(srcdir, start=rstdir), outdir)
# path to root relative to rst
rst2builddir = os.path.join(os.path.relpath(builddir, start=rstdir), outdir)
# path relative to source (for images)
root2builddir = os.path.join(os.path.relpath(builddir, start=srcdir), outdir)
logging.debug(
"report_directive.run: arguments=%s, options=%s, lineno=%s, content=%s, document=%s"
% (str(arguments), str(options), str(lineno), str(content), str(document))
)
logging.debug(
"report_directive.run: plotdir=%s, basename=%s, ext=%s, fname=%s, rstdir=%s, srcdir=%s, builddir=%s"
% (tracker_name, basename, ext, fname, rstdir, srcdir, builddir)
)
logging.debug(
"report_directive.run: tracker_name=%s, basedir=%s, rst2src=%s, root2build=%s, outdir=%s, codename=%s"
% (tracker_name, basedir, rst2srcdir, rst2builddir, outdir, codename)
)
# try to create. If several processes try to create it,
# testing with `if` will not work.
try:
os.makedirs(outdir)
except OSError as msg:
pass
if not os.path.exists(outdir):
raise OSError("could not create directory %s: %s" % (outdir, msg))
########################################################
# collect options
# replace placedholders
try:
options = Utils.updateOptions(options)
except ValueError as msg:
logging.warn("failure while updating options: %s" % msg)
logging.debug("report_directive.run: options=%s" % (str(options),))
transformer_names = []
renderer_name = None
# get layout option
layout = options.get("layout", "column")
option_map = getOptionMap()
renderer_options = Utils.selectAndDeleteOptions(options, option_map["render"])
transformer_options = Utils.selectAndDeleteOptions(options, option_map["transform"])
dispatcher_options = Utils.selectAndDeleteOptions(options, option_map["dispatch"])
tracker_options = Utils.selectAndDeleteOptions(options, option_map["tracker"])
display_options = Utils.selectAndDeleteOptions(options, option_map["display"])
logging.debug("report_directive.run: renderer options: %s" % str(renderer_options))
logging.debug("report_directive.run: transformer options: %s" % str(transformer_options))
logging.debug("report_directive.run: dispatcher options: %s" % str(dispatcher_options))
logging.debug("report_directive.run: tracker options: %s" % str(tracker_options))
logging.debug("report_directive.run: display options: %s" % str(display_options))
if "transform" in display_options:
transformer_names = display_options["transform"].split(",")
del display_options["transform"]
if "render" in display_options:
renderer_name = display_options["render"]
del display_options["render"]
########################################################
# check for missing files
if renderer_name != None:
options_key = (
str(renderer_options)
+ str(transformer_options)
+ str(dispatcher_options)
+ str(tracker_options)
+ str(transformer_names)
)
options_hash = hashlib.md5(options_key.encode()).hexdigest()
template_name = Utils.quote_filename(Config.SEPARATOR.join((tracker_name, renderer_name, options_hash)))
filename_text = os.path.join(outdir, "%s.txt" % (template_name))
logging.debug("report_directive.run: options_hash=%s" % options_hash)
###########################################################
# check for existing files
# update strategy does not use file stamps, but checks
# for presence/absence of text element and if all figures
# mentioned in the text element are present
###########################################################
queries = [re.compile("%s(%s\S+.%s)" % (root2builddir, outdir, suffix)) for suffix in ("png", "pdf")]
logging.debug("report_directive.run: checking for changed files.")
# check if text element exists
if os.path.exists(filename_text):
lines = [x[:-1] for x in open(filename_text, "r").readlines()]
filenames = []
# check if all figures are present
for line in lines:
for query in queries:
x = query.search(line)
if x:
filenames.extend(list(x.groups()))
logging.debug("report_directive.run: %s: checking for %s" % (tag, str(filenames)))
for filename in filenames:
if not os.path.exists(filename):
logging.info("report_directive.run: %s: redo: %s missing" % (tag, filename))
break
else:
logging.info("report_directive.run: %s: noredo: all files are present" % tag)
## all is present - save text and return
if lines and state_machine:
state_machine.insert_input(lines, state_machine.input_lines.source(0))
return []
else:
logging.debug("report_directive.run: %s: no check performed: %s missing" % (tag, str(filename_text)))
else:
template_name = ""
filename_text = None
##########################################################
# Initialize collectors
collectors = []
for collector in list(getPlugins("collect").values()):
collectors.append(collector())
##########################################################
## instantiate tracker, dispatcher, renderer and transformers
## and collect output
###########################################################
try:
########################################################
# find the tracker
logging.debug("report_directive.run: collecting tracker %s with options %s " % (tracker_name, tracker_options))
code, tracker = Utils.makeTracker(tracker_name, (), tracker_options)
if not tracker:
logging.error("report_directive.run: no tracker - no output from %s " % str(document))
raise ValueError("tracker `%s` not found" % tracker_name)
logging.debug("report_directive.run: collected tracker %s" % tracker_name)
tracker_id = Cache.tracker2key(tracker)
########################################################
# determine the transformer
logging.debug("report_directive.run: creating transformers")
transformers = Utils.getTransformers(transformer_names, transformer_options)
########################################################
# determine the renderer
logging.debug("report_directive.run: creating renderer.")
if renderer_name == None:
logging.error("report_directive.run: no renderer - no output from %s" % str(document))
raise ValueError("the report directive requires a renderer")
renderer = Utils.getRenderer(renderer_name, renderer_options)
########################################################
# create and call dispatcher
logging.debug("report_directive.run: creating dispatcher")
dispatcher = Dispatcher.Dispatcher(tracker, renderer, transformers)
# add the tracker options
dispatcher_options.update(tracker_options)
blocks = dispatcher(**dispatcher_options)
if blocks == None:
blocks = ResultBlocks(
ResultBlocks(Utils.buildWarning("NoData", "tracker %s returned no Data" % str(tracker)))
)
code = None
tracker_id = None
except:
logging.warn("report_directive.run: exception caught at %s:%i - see document" % (str(document), lineno))
blocks = ResultBlocks(ResultBlocks(Utils.buildException("invocation")))
code = None
tracker_id = None
logging.debug("report_directive.run: profile: started: collecting: %s" % tag)
########################################################
## write code output
linked_codename = re.sub("\\\\", "/", os.path.join(rst2srcdir, codename))
if code and basedir != outdir:
with open(os.path.join(outdir, codename), "w") as outfile:
for line in code:
outfile.write(line)
########################################################
## write notebook snippet
linked_notebookname = re.sub("\\\\", "/", os.path.join(rst2srcdir, notebookname))
if basedir != outdir:
with open(os.path.join(outdir, notebookname), "w") as outfile:
Utils.writeNoteBookEntry(
outfile,
renderer=renderer_name,
tracker=tracker_name,
transformers=transformer_names,
options=renderer_options.items() + tracker_options.items() + transformer_options.items(),
)
###########################################################
# collect images
###########################################################
map_figure2text = {}
try:
for collector in collectors:
map_figure2text.update(
collector.collect(
blocks,
template_name,
outdir,
rstdir,
builddir,
srcdir,
content,
display_options,
tracker_id,
links={"code_url": linked_codename, "notebook_url": linked_notebookname},
)
)
except:
logging.warn(
"report_directive.run: exception caught while collecting with %s at %s:%i - see document"
% (collector, str(document), lineno)
)
blocks = ResultBlocks(ResultBlocks(Utils.buildException("collection")))
code = None
tracker_id = None
###########################################################
# replace place holders or add text
###########################################################
## add default for text-only output
map_figure2text["default-prefix"] = TEMPLATE_TEXT % locals()
map_figure2text["default-suffix"] = ""
blocks.updatePlaceholders(map_figure2text)
###########################################################
## render the output taking into account the layout
lines = Utils.layoutBlocks(blocks, layout)
###########################################################
# add caption
lines.extend(["::", ""])
if content:
lines.extend([" %s" % row.strip() for row in content])
lines.append("")
lines.append("")
# output rst text for this renderer
if filename_text:
outfile = open(filename_text, "w")
outfile.write("\n".join(lines))
outfile.close()
if SPHINXREPORT_DEBUG:
for x, l in enumerate(lines):
print("%5i %s" % (x, l))
if len(lines) and state_machine:
state_machine.insert_input(lines, state_machine.input_lines.source(0))
logging.debug("report_directive.run: profile: finished: collecting: %s" % tag)
logging.debug("report_directive.run: profile: finished: rst: %s:%i" % (str(document), lineno))
return []