def exportChildren(self, outfile, level, name_='XSDataInputPeakSearch'): XSDataInput.exportChildren(self, outfile, level, name_) if self.__darkFile is not None: self.darkFile.export(outfile, level, name_='darkFile') if self.__imageFormat is not None: self.imageFormat.export(outfile, level, name_='imageFormat') if self.__indexMax is not None: self.indexMax.export(outfile, level, name_='indexMax') else: warnEmptyAttribute("indexMax", "XSDataInteger") if self.__indexMin is not None: self.indexMin.export(outfile, level, name_='indexMin') else: warnEmptyAttribute("indexMin", "XSDataInteger") if self.__numberOfDigits is not None: self.numberOfDigits.export(outfile, level, name_='numberOfDigits') if self.__outputStem is not None: self.outputStem.export(outfile, level, name_='outputStem') if self.__stem is not None: self.stem.export(outfile, level, name_='stem') else: warnEmptyAttribute("stem", "XSDataString") for threshold_ in self.getThreshold(): threshold_.export(outfile, level, name_='threshold') if self.getThreshold() == []: warnEmptyAttribute("threshold", "XSDataDouble")
def exportChildren(self, outfile, level, name_='XSDataInputControlCrystFEL'): XSDataInput.exportChildren(self, outfile, level, name_) if self._dataCollectionId is not None: self.dataCollectionId.export(outfile, level, name_='dataCollectionId') else: warnEmptyAttribute("dataCollectionId", "XSDataInteger") if self._processDirectory is not None: self.processDirectory.export(outfile, level, name_='processDirectory') if self._imagesFullPath is not None: self.imagesFullPath.export(outfile, level, name_='imagesFullPath') if self._geomFile is not None: self.geomFile.export(outfile, level, name_='geomFile') else: warnEmptyAttribute("geomFile", "XSDataString") if self._cellFile is not None: self.cellFile.export(outfile, level, name_='cellFile') else: warnEmptyAttribute("cellFile", "XSDataString") if self._pointGroup is not None: self.pointGroup.export(outfile, level, name_='pointGroup') else: warnEmptyAttribute("pointGroup", "XSDataString") if self._spaceGroup is not None: self.spaceGroup.export(outfile, level, name_='spaceGroup') else: warnEmptyAttribute("spaceGroup", "XSDataString") if self._resCutOff is not None: self.resCutOff.export(outfile, level, name_='resCutOff') else: warnEmptyAttribute("resCutOff", "XSDataString") if self._baseFileName is not None: self.baseFileName.export(outfile, level, name_='baseFileName') else: warnEmptyAttribute("baseFileName", "XSDataString")
def exportChildren(self, outfile, level, name_='XSDataInputH5ToCBF'): XSDataInput.exportChildren(self, outfile, level, name_) if self._imageNumber is not None: self.imageNumber.export(outfile, level, name_='imageNumber') if self._hdf5ImageNumber is not None: self.hdf5ImageNumber.export(outfile, level, name_='hdf5ImageNumber') if self._hdf5File is not None: self.hdf5File.export(outfile, level, name_='hdf5File') else: warnEmptyAttribute("hdf5File", "XSDataFile") if self._forcedOutputDirectory is not None: self.forcedOutputDirectory.export(outfile, level, name_='forcedOutputDirectory') if self._forcedOutputImageNumber is not None: self.forcedOutputImageNumber.export( outfile, level, name_='forcedOutputImageNumber') if self._startImageNumber is not None: self.startImageNumber.export(outfile, level, name_='startImageNumber') if self._endImageNumber is not None: self.endImageNumber.export(outfile, level, name_='endImageNumber')
def exportChildren(self, outfile, level, name_='XSDataInputRdfit'): XSDataInput.exportChildren(self, outfile, level, name_) if self._bestXmlFile is not None: self.bestXmlFile.export(outfile, level, name_='bestXmlFile') else: warnEmptyAttribute("bestXmlFile", "XSDataFile") for xdsHklFile_ in self.getXdsHklFile(): xdsHklFile_.export(outfile, level, name_='xdsHklFile') if self.getXdsHklFile() == []: warnEmptyAttribute("xdsHklFile", "XSDataFile") if self._dmin is not None: self.dmin.export(outfile, level, name_='dmin') if self._defaultBeta is not None: self.defaultBeta.export(outfile, level, name_='defaultBeta') if self._defaultGama is not None: self.defaultGama.export(outfile, level, name_='defaultGama') if self._bFactorMtvplotFile is not None: self.bFactorMtvplotFile.export(outfile, level, name_='bFactorMtvplotFile') if self._bFactorGlePlotFile is not None: self.bFactorGlePlotFile.export(outfile, level, name_='bFactorGlePlotFile') if self._bScaleIntensityMtvPlotFile is not None: self.bScaleIntensityMtvPlotFile.export( outfile, level, name_='bScaleIntensityMtvPlotFile') if self._bScaleIntensityGleFile is not None: self.bScaleIntensityGleFile.export(outfile, level, name_='bScaleIntensityGleFile') if self._resultsFile is not None: self.resultsFile.export(outfile, level, name_='resultsFile') if self._resultsXmlFile is not None: self.resultsXmlFile.export(outfile, level, name_='resultsXmlFile')
def exportChildren(self, outfile, level, name_='XSDataInputAutoPROC'): XSDataInput.exportChildren(self, outfile, level, name_) for identifier_ in self.getIdentifier(): identifier_.export(outfile, level, name_='identifier') if self.getIdentifier() == []: warnEmptyAttribute("identifier", "XSDataAutoPROCIdentifier") if self._lowResolutionLimit is not None: self.lowResolutionLimit.export(outfile, level, name_='lowResolutionLimit') if self._highResolutionLimit is not None: self.highResolutionLimit.export(outfile, level, name_='highResolutionLimit') if self._anomalous is not None: self.anomalous.export(outfile, level, name_='anomalous') if self._refMTZ is not None: self.refMTZ.export(outfile, level, name_='refMTZ') if self._configDef is not None: self.configDef.export(outfile, level, name_='configDef') if self._masterH5 is not None: self.masterH5.export(outfile, level, name_='masterH5') if self._symm is not None: self.symm.export(outfile, level, name_='symm') if self._cell is not None: self.cell.export(outfile, level, name_='cell')
def exportChildren(self, outfile, level, name_='XSDataInputControlAutoPROC'): XSDataInput.exportChildren(self, outfile, level, name_) if self._dataCollectionId is not None: self.dataCollectionId.export(outfile, level, name_='dataCollectionId') if self._dirN is not None: self.dirN.export(outfile, level, name_='dirN') if self._configDef is not None: self.configDef.export(outfile, level, name_='configDef') if self._templateN is not None: self.templateN.export(outfile, level, name_='templateN') if self._fromN is not None: self.fromN.export(outfile, level, name_='fromN') if self._toN is not None: self.toN.export(outfile, level, name_='toN') if self._processDirectory is not None: self.processDirectory.export(outfile, level, name_='processDirectory') if self._doAnom is not None: self.doAnom.export(outfile, level, name_='doAnom') if self._doAnomAndNonanom is not None: self.doAnomAndNonanom.export(outfile, level, name_='doAnomAndNonanom') if self._symm is not None: self.symm.export(outfile, level, name_='symm') if self._cell is not None: self.cell.export(outfile, level, name_='cell') if self._reprocess is not None: self.reprocess.export(outfile, level, name_='reprocess') if self._lowResolutionLimit is not None: self.lowResolutionLimit.export(outfile, level, name_='lowResolutionLimit') if self._highResolutionLimit is not None: self.highResolutionLimit.export(outfile, level, name_='highResolutionLimit')
def exportChildren(self, outfile, level, name_='XSDataInputControlXia2DIALS'): XSDataInput.exportChildren(self, outfile, level, name_) if self._dataCollectionId is not None: self.dataCollectionId.export(outfile, level, name_='dataCollectionId') if self._processDirectory is not None: self.processDirectory.export(outfile, level, name_='processDirectory') if self._doAnom is not None: self.doAnom.export(outfile, level, name_='doAnom') if self._doAnomAndNonanom is not None: self.doAnomAndNonanom.export(outfile, level, name_='doAnomAndNonanom') if self._spaceGroup is not None: self.spaceGroup.export(outfile, level, name_='spaceGroup') if self._unitCell is not None: self.unitCell.export(outfile, level, name_='unitCell') if self._startFrame is not None: self.startFrame.export(outfile, level, name_='startFrame') if self._endFrame is not None: self.endFrame.export(outfile, level, name_='endFrame') if self._reprocess is not None: self.reprocess.export(outfile, level, name_='reprocess')
def exportChildren(self, outfile, level, name_='XSDataInputXdsBurnStrategy'): XSDataInput.exportChildren(self, outfile, level, name_) if self._input_file is not None: self.input_file.export(outfile, level, name_='input_file') else: warnEmptyAttribute("input_file", "XSDataString") if self._space_group is not None: self.space_group.export(outfile, level, name_='space_group') else: warnEmptyAttribute("space_group", "XSDataInteger") if self._unit_cell_a is not None: self.unit_cell_a.export(outfile, level, name_='unit_cell_a') else: warnEmptyAttribute("unit_cell_a", "XSDataDouble") if self._unit_cell_b is not None: self.unit_cell_b.export(outfile, level, name_='unit_cell_b') else: warnEmptyAttribute("unit_cell_b", "XSDataDouble") if self._unit_cell_c is not None: self.unit_cell_c.export(outfile, level, name_='unit_cell_c') else: warnEmptyAttribute("unit_cell_c", "XSDataDouble") if self._unit_cell_alpha is not None: self.unit_cell_alpha.export(outfile, level, name_='unit_cell_alpha') else: warnEmptyAttribute("unit_cell_alpha", "XSDataDouble") if self._unit_cell_beta is not None: self.unit_cell_beta.export(outfile, level, name_='unit_cell_beta') else: warnEmptyAttribute("unit_cell_beta", "XSDataDouble") if self._unit_cell_gamma is not None: self.unit_cell_gamma.export(outfile, level, name_='unit_cell_gamma') else: warnEmptyAttribute("unit_cell_gamma", "XSDataDouble")
def exportChildren(self, outfile, level, name_='XSDataInputControlCrystFEL'): XSDataInput.exportChildren(self, outfile, level, name_) if self._dataCollectionId is not None: self.dataCollectionId.export(outfile, level, name_='dataCollectionId') if self._processDirectory is not None: self.processDirectory.export(outfile, level, name_='processDirectory') if self._geomFile is not None: self.geomFile.export(outfile, level, name_='geomFile') else: warnEmptyAttribute("geomFile", "XSDataString") if self._cellFile is not None: self.cellFile.export(outfile, level, name_='cellFile') else: warnEmptyAttribute("cellFile", "XSDataString") if self._imagesFullPath is not None: self.imagesFullPath.export(outfile, level, name_='imagesFullPath') else: warnEmptyAttribute("imagesFullPath", "XSDataString") if self._streamFile is not None: self.streamFile.export(outfile, level, name_='streamFile') else: warnEmptyAttribute("streamFile", "XSDataString") if self._hklFile is not None: self.hklFile.export(outfile, level, name_='hklFile') else: warnEmptyAttribute("hklFile", "XSDataString") if self._mtzFile is not None: self.mtzFile.export(outfile, level, name_='mtzFile') else: warnEmptyAttribute("mtzFile", "XSDataString")
def exportChildren(self, outfile, level, name_='XSDataInputCrystFEL'): XSDataInput.exportChildren(self, outfile, level, name_) if self._geomFile is not None: self.geomFile.export(outfile, level, name_='geomFile') else: warnEmptyAttribute("geomFile", "XSDataString") if self._cellFile is not None: self.cellFile.export(outfile, level, name_='cellFile') else: warnEmptyAttribute("cellFile", "XSDataString") if self._imagesFullPath is not None: self.imagesFullPath.export(outfile, level, name_='imagesFullPath') else: warnEmptyAttribute("imagesFullPath", "XSDataString") if self._pointGroup is not None: self.pointGroup.export(outfile, level, name_='pointGroup') else: warnEmptyAttribute("pointGroup", "XSDataString") if self._spaceGroup is not None: self.spaceGroup.export(outfile, level, name_='spaceGroup') else: warnEmptyAttribute("spaceGroup", "XSDataString") if self._resCutOff is not None: self.resCutOff.export(outfile, level, name_='resCutOff') else: warnEmptyAttribute("resCutOff", "XSDataString") if self._baseFileName is not None: self.baseFileName.export(outfile, level, name_='baseFileName') else: warnEmptyAttribute("baseFileName", "XSDataString")
def exportChildren(self, outfile, level, name_='XSDataInputRdfit'): XSDataInput.exportChildren(self, outfile, level, name_) if self._bestXmlFile is not None: self.bestXmlFile.export(outfile, level, name_='bestXmlFile') else: warnEmptyAttribute("bestXmlFile", "XSDataFile") for xdsHklFile_ in self.getXdsHklFile(): xdsHklFile_.export(outfile, level, name_='xdsHklFile') if self.getXdsHklFile() == []: warnEmptyAttribute("xdsHklFile", "XSDataFile") if self._dmin is not None: self.dmin.export(outfile, level, name_='dmin') if self._defaultBeta is not None: self.defaultBeta.export(outfile, level, name_='defaultBeta') if self._defaultGama is not None: self.defaultGama.export(outfile, level, name_='defaultGama') if self._bFactorMtvplotFile is not None: self.bFactorMtvplotFile.export(outfile, level, name_='bFactorMtvplotFile') if self._bFactorGlePlotFile is not None: self.bFactorGlePlotFile.export(outfile, level, name_='bFactorGlePlotFile') if self._bScaleIntensityMtvPlotFile is not None: self.bScaleIntensityMtvPlotFile.export(outfile, level, name_='bScaleIntensityMtvPlotFile') if self._bScaleIntensityGleFile is not None: self.bScaleIntensityGleFile.export(outfile, level, name_='bScaleIntensityGleFile') if self._resultsFile is not None: self.resultsFile.export(outfile, level, name_='resultsFile') if self._resultsXmlFile is not None: self.resultsXmlFile.export(outfile, level, name_='resultsXmlFile')
def exportChildren(self, outfile, level, name_='XSDataInputExecCommandLine'): XSDataInput.exportChildren(self, outfile, level, name_) if self.__commandLineOptions is not None: self.commandLineOptions.export(outfile, level, name_='commandLineOptions') if self.__commandLineProgram is not None: self.commandLineProgram.export(outfile, level, name_='commandLineProgram') else: warnEmptyAttribute("commandLineProgram", "XSDataFile") if self.__fireAndForget is not None: self.fireAndForget.export(outfile, level, name_='fireAndForget') if self.__inputFileName is not None: self.inputFileName.export(outfile, level, name_='inputFileName') else: warnEmptyAttribute("inputFileName", "XSDataFile") if self.__inputFileType is not None: self.inputFileType.export(outfile, level, name_='inputFileType') if self.__outfileFromStdout is not None: self.outfileFromStdout.export(outfile, level, name_='outfileFromStdout') if self.__outputPath is not None: self.outputPath.export(outfile, level, name_='outputPath')
def exportChildren(self, outfile, level, name_="XSDataInputControlXia2DIALS"): XSDataInput.exportChildren(self, outfile, level, name_) if self._dataCollectionId is not None: self.dataCollectionId.export(outfile, level, name_="dataCollectionId") if self._processDirectory is not None: self.processDirectory.export(outfile, level, name_="processDirectory") if self._doAnomAndNonanom is not None: self.doAnomAndNonanom.export(outfile, level, name_="doAnomAndNonanom")
def exportChildren(self, outfile, level, name_='XSDataInputSimpleHTMLPage'): XSDataInput.exportChildren(self, outfile, level, name_) if self.__characterisationResult is not None: self.characterisationResult.export(outfile, level, name_='characterisationResult') else: warnEmptyAttribute("characterisationResult", "XSDataResultCharacterisation") for fileGraph_ in self.getFileGraph(): fileGraph_.export(outfile, level, name_='fileGraph')
def exportChildren(self, outfile, level, name_='XSDataInputSimpleHTMLPage'): XSDataInput.exportChildren(self, outfile, level, name_) if self._characterisationResult is not None: self.characterisationResult.export(outfile, level, name_='characterisationResult') if self._characterisationResultv2_0 is not None: self.characterisationResultv2_0.export(outfile, level, name_='characterisationResultv2_0') for fileGraph_ in self.getFileGraph(): fileGraph_.export(outfile, level, name_='fileGraph')
def exportChildren(self, outfile, level, name_='XSDataInputXia2DIALS'): XSDataInput.exportChildren(self, outfile, level, name_) for image_ in self.getImage(): image_.export(outfile, level, name_='image') if self.getImage() == []: warnEmptyAttribute("image", "XSDataFile") if self._anomalous is not None: self.anomalous.export(outfile, level, name_='anomalous')
def exportChildren(self, outfile, level, name_='XSDataInputAccumulator'): XSDataInput.exportChildren(self, outfile, level, name_) if self.__flush is not None: self.flush.export(outfile, level, name_='flush') for item_ in self.getItem(): item_.export(outfile, level, name_='item') for query_ in self.getQuery(): query_.export(outfile, level, name_='query')
def exportChildren(self, outfile, level, name_='XSDataInputAccumulator'): XSDataInput.exportChildren(self, outfile, level, name_) if self.__flush is not None: self.flush.export(outfile, level, name_='flush') for item_ in self.getItem(): item_.export(outfile, level, name_='item') for query_ in self.getQuery(): query_.export(outfile, level, name_='query')
def exportChildren(self, outfile, level, name_='XSDataInputReadMatrix'): XSDataInput.exportChildren(self, outfile, level, name_) if self.__inputMatrixFile is not None: self.inputMatrixFile.export(outfile, level, name_='inputMatrixFile') else: warnEmptyAttribute("inputMatrixFile", "XSDataFile")
def exportChildren(self, outfile, level, name_='XSDataInputBackground3D'): XSDataInput.exportChildren(self, outfile, level, name_) if self._detectorType is not None: self.detectorType.export(outfile, level, name_='detectorType') else: warnEmptyAttribute("detectorType", "XSDataString") if self._exposureTime is not None: self.exposureTime.export(outfile, level, name_='exposureTime') else: warnEmptyAttribute("exposureTime", "XSDataDouble") if self._detectorDistance is not None: self.detectorDistance.export(outfile, level, name_='detectorDistance') else: warnEmptyAttribute("detectorDistance", "XSDataDouble") if self._wavelength is not None: self.wavelength.export(outfile, level, name_='wavelength') else: warnEmptyAttribute("wavelength", "XSDataDouble") if self._fractionPolarization is not None: self.fractionPolarization.export(outfile, level, name_='fractionPolarization') if self._orgx is not None: self.orgx.export(outfile, level, name_='orgx') else: warnEmptyAttribute("orgx", "XSDataDouble") if self._orgy is not None: self.orgy.export(outfile, level, name_='orgy') else: warnEmptyAttribute("orgy", "XSDataDouble") if self._oscillationRange is not None: self.oscillationRange.export(outfile, level, name_='oscillationRange') else: warnEmptyAttribute("oscillationRange", "XSDataDouble") if self._imageStep is not None: self.imageStep.export(outfile, level, name_='imageStep') if self._startingAngle is not None: self.startingAngle.export(outfile, level, name_='startingAngle') if self._firstImageNumber is not None: self.firstImageNumber.export(outfile, level, name_='firstImageNumber') else: warnEmptyAttribute("firstImageNumber", "XSDataInteger") if self._numberImages is not None: self.numberImages.export(outfile, level, name_='numberImages') else: warnEmptyAttribute("numberImages", "XSDataInteger") if self._nameTemplateImage is not None: self.nameTemplateImage.export(outfile, level, name_='nameTemplateImage') else: warnEmptyAttribute("nameTemplateImage", "XSDataString")
def exportChildren(self, outfile, level, name_='XSDataInputReadDataBM23'): XSDataInput.exportChildren(self, outfile, level, name_) if self._inputFile is not None: self.inputFile.export(outfile, level, name_='inputFile') else: warnEmptyAttribute("inputFile", "XSDataFile") if self._nSkipHeader is not None: self.nSkipHeader.export(outfile, level, name_='nSkipHeader') else: warnEmptyAttribute("nSkipHeader", "XSDataInteger")
def exportChildren(self, outfile, level, name_='XSDataInputReadDataID24'): XSDataInput.exportChildren(self, outfile, level, name_) for inputFile_ in self.getInputFile(): inputFile_.export(outfile, level, name_='inputFile') if self.getInputFile() == []: warnEmptyAttribute("inputFile", "XSDataFile") if self._energyCalibration is not None: self.energyCalibration.export(outfile, level, name_='energyCalibration') else: warnEmptyAttribute("energyCalibration", "XSDataEnergyCalibration")
def exportChildren(self, outfile, level, name_='XSDataInputCalibrateEnergy'): XSDataInput.exportChildren(self, outfile, level, name_) if self._elementName is not None: self.elementName.export(outfile, level, name_='elementName') else: warnEmptyAttribute("elementName", "XSDataString") if self._inputFile is not None: self.inputFile.export(outfile, level, name_='inputFile') else: warnEmptyAttribute("inputFile", "XSDataFile")
def exportChildren(self, outfile, level, name_='XSDataInputMatrixInvertv2'): XSDataInput.exportChildren(self, outfile, level, name_) if self.__inputMatrix is not None: self.inputMatrix.export(outfile, level, name_='inputMatrix') else: warnEmptyAttribute("inputMatrix", "XSDataImageExt") if self.__outputMatrix is not None: self.outputMatrix.export(outfile, level, name_='outputMatrix') else: warnEmptyAttribute("outputMatrix", "XSDataImageExt")
def exportChildren(self, outfile, level, name_='XSDataInputPyarchThumbnailGeneratorParallel'): XSDataInput.exportChildren(self, outfile, level, name_) for diffractionImage_ in self.getDiffractionImage(): diffractionImage_.export(outfile, level, name_='diffractionImage') if self.getDiffractionImage() == []: warnEmptyAttribute("diffractionImage", "XSDataFile") if self._forcedOutputDirectory is not None: self.forcedOutputDirectory.export(outfile, level, name_='forcedOutputDirectory') if self._waitForFileTimeOut is not None: self.waitForFileTimeOut.export(outfile, level, name_='waitForFileTimeOut')
def exportChildren(self, outfile, level, name_='XSDataInputReadDataBM23'): XSDataInput.exportChildren(self, outfile, level, name_) if self._inputFile is not None: self.inputFile.export(outfile, level, name_='inputFile') else: warnEmptyAttribute("inputFile", "XSDataFile") if self._nSkipHeader is not None: self.nSkipHeader.export(outfile, level, name_='nSkipHeader') else: warnEmptyAttribute("nSkipHeader", "XSDataInteger")
def exportChildren(self, outfile, level, name_='XSDataInputWriteMatrix'): XSDataInput.exportChildren(self, outfile, level, name_) if self.__inputMatrix is not None: self.inputMatrix.export(outfile, level, name_='inputMatrix') else: warnEmptyAttribute("inputMatrix", "XSDataArray") if self.__outputMatrixFile is not None: self.outputMatrixFile.export(outfile, level, name_='outputMatrixFile') else: warnEmptyAttribute("outputMatrixFile", "XSDataFile")
def exportChildren(self, outfile, level, name_='XSDataInputPyarchThumbnailGenerator'): XSDataInput.exportChildren(self, outfile, level, name_) if self._diffractionImage is not None: self.diffractionImage.export(outfile, level, name_='diffractionImage') else: warnEmptyAttribute("diffractionImage", "XSDataFile") if self._forcedOutputDirectory is not None: self.forcedOutputDirectory.export(outfile, level, name_='forcedOutputDirectory') if self._waitForFileTimeOut is not None: self.waitForFileTimeOut.export(outfile, level, name_='waitForFileTimeOut')
def exportChildren(self, outfile, level, name_='XSDataRaddoseInput'): XSDataInput.exportChildren(self, outfile, level, name_) if self.__beamExposureTime is not None: self.beamExposureTime.export(outfile, level, name_='beamExposureTime') else: warnEmptyAttribute("beamExposureTime", "XSDataTime") if self.__beamFlux is not None: self.beamFlux.export(outfile, level, name_='beamFlux') else: warnEmptyAttribute("beamFlux", "XSDataFlux") if self.__beamSize is not None: self.beamSize.export(outfile, level, name_='beamSize') else: warnEmptyAttribute("beamSize", "XSDataSize") if self.__beamWavelength is not None: self.beamWavelength.export(outfile, level, name_='beamWavelength') else: warnEmptyAttribute("beamWavelength", "XSDataWavelength") if self.__crystalCell is not None: self.crystalCell.export(outfile, level, name_='crystalCell') else: warnEmptyAttribute("crystalCell", "XSDataCell") if self.__crystalNDNA is not None: self.crystalNDNA.export(outfile, level, name_='crystalNDNA') else: warnEmptyAttribute("crystalNDNA", "XSDataInteger") if self.__crystalNMON is not None: self.crystalNMON.export(outfile, level, name_='crystalNMON') else: warnEmptyAttribute("crystalNMON", "XSDataInteger") if self.__crystalNRES is not None: self.crystalNRES.export(outfile, level, name_='crystalNRES') else: warnEmptyAttribute("crystalNRES", "XSDataInteger") if self.__crystalNRNA is not None: self.crystalNRNA.export(outfile, level, name_='crystalNRNA') else: warnEmptyAttribute("crystalNRNA", "XSDataInteger") if self.__crystalPATM is not None: self.crystalPATM.export(outfile, level, name_='crystalPATM') else: warnEmptyAttribute("crystalPATM", "XSDataAtomicComposition") if self.__crystalSATM is not None: self.crystalSATM.export(outfile, level, name_='crystalSATM') else: warnEmptyAttribute("crystalSATM", "XSDataAtomicComposition") if self.__crystalSize is not None: self.crystalSize.export(outfile, level, name_='crystalSize') else: warnEmptyAttribute("crystalSize", "XSDataSize") if self.__numberOfImages is not None: self.numberOfImages.export(outfile, level, name_='numberOfImages') else: warnEmptyAttribute("numberOfImages", "XSDataInteger")
def exportChildren(self, outfile, level, name_='XSDataInputReadDataID24'): XSDataInput.exportChildren(self, outfile, level, name_) for inputFile_ in self.getInputFile(): inputFile_.export(outfile, level, name_='inputFile') if self.getInputFile() == []: warnEmptyAttribute("inputFile", "XSDataFile") if self._energyCalibration is not None: self.energyCalibration.export(outfile, level, name_='energyCalibration') else: warnEmptyAttribute("energyCalibration", "XSDataEnergyCalibration")
def exportChildren(self, outfile, level, name_='XSDataInputRsync'): XSDataInput.exportChildren(self, outfile, level, name_) if self.__options is not None: self.options.export(outfile, level, name_='options') if self.__source is not None: self.source.export(outfile, level, name_='source') else: warnEmptyAttribute("source", "XSDataFile") if self.__destination is not None: self.destination.export(outfile, level, name_='destination') else: warnEmptyAttribute("destination", "XSDataFile")
def exportChildren(self, outfile, level, name_='XSDataInputHTML2PDF'): XSDataInput.exportChildren(self, outfile, level, name_) for htmlFile_ in self.getHtmlFile(): htmlFile_.export(outfile, level, name_='htmlFile') if self.getHtmlFile() == []: warnEmptyAttribute("htmlFile", "XSDataFile") if self._resultDirectory is not None: self.resultDirectory.export(outfile, level, name_='resultDirectory') if self._paperSize is not None: self.paperSize.export(outfile, level, name_='paperSize') if self._lowQuality is not None: self.lowQuality.export(outfile, level, name_='lowQuality')
def exportChildren(self, outfile, level, name_='XSDataInputGridScreening'): XSDataInput.exportChildren(self, outfile, level, name_) if self.__imageFile is not None: self.imageFile.export(outfile, level, name_='imageFile') else: warnEmptyAttribute("imageFile", "XSDataFile") if self.__diffractionPlan is not None: self.diffractionPlan.export(outfile, level, name_='diffractionPlan') if self.__storeImageQualityIndicatorsInISPyB is not None: self.storeImageQualityIndicatorsInISPyB.export(outfile, level, name_='storeImageQualityIndicatorsInISPyB') if self.__doOnlyImageQualityIndicators is not None: self.doOnlyImageQualityIndicators.export(outfile, level, name_='doOnlyImageQualityIndicators')
def exportChildren(self, outfile, level, name_='XSDataInputNormalize'): XSDataInput.exportChildren(self, outfile, level, name_) for data_ in self.getData(): data_.export(outfile, level, name_='data') if self.getData() == []: warnEmptyAttribute("data", "XSDataImageExt") for dark_ in self.getDark(): dark_.export(outfile, level, name_='dark') for flat_ in self.getFlat(): flat_.export(outfile, level, name_='flat') if self.__output is not None: self.output.export(outfile, level, name_='output')
def exportChildren(self, outfile, level, name_='XSDataInputMXWaitFile'): XSDataInput.exportChildren(self, outfile, level, name_) if self._file is not None: self.file.export(outfile, level, name_='file') else: warnEmptyAttribute("file", "XSDataFile") if self._size is not None: self.size.export(outfile, level, name_='size') else: warnEmptyAttribute("size", "XSDataInteger") if self._timeOut is not None: self.timeOut.export(outfile, level, name_='timeOut')
def exportChildren(self, outfile, level, name_='XSDataInputMXWaitFile'): XSDataInput.exportChildren(self, outfile, level, name_) if self._file is not None: self.file.export(outfile, level, name_='file') else: warnEmptyAttribute("file", "XSDataFile") if self._size is not None: self.size.export(outfile, level, name_='size') else: warnEmptyAttribute("size", "XSDataInteger") if self._timeOut is not None: self.timeOut.export(outfile, level, name_='timeOut')
def exportChildren(self, outfile, level, name_="XSDataInputRsync"): XSDataInput.exportChildren(self, outfile, level, name_) if self.__options is not None: self.options.export(outfile, level, name_="options") if self.__source is not None: self.source.export(outfile, level, name_="source") else: warnEmptyAttribute("source", "XSDataFile") if self.__destination is not None: self.destination.export(outfile, level, name_="destination") else: warnEmptyAttribute("destination", "XSDataFile")
def exportChildren(self, outfile, level, name_='XSDataInputWaitMultiFile'): XSDataInput.exportChildren(self, outfile, level, name_) for expectedFile_ in self.getExpectedFile(): expectedFile_.export(outfile, level, name_='expectedFile') if self.getExpectedFile() == []: warnEmptyAttribute("expectedFile", "XSDataFile") if self.__expectedSize is not None: self.expectedSize.export(outfile, level, name_='expectedSize') else: warnEmptyAttribute("expectedSize", "XSDataInteger") if self.__timeOut is not None: self.timeOut.export(outfile, level, name_='timeOut')
def exportChildren(self, outfile, level, name_='XSDataInputWriteMatrix'): XSDataInput.exportChildren(self, outfile, level, name_) if self.__inputMatrix is not None: self.inputMatrix.export(outfile, level, name_='inputMatrix') else: warnEmptyAttribute("inputMatrix", "XSDataArray") if self.__outputMatrixFile is not None: self.outputMatrixFile.export(outfile, level, name_='outputMatrixFile') else: warnEmptyAttribute("outputMatrixFile", "XSDataFile")
def exportChildren(self, outfile, level, name_='XSDataInputWaitMultiFile'): XSDataInput.exportChildren(self, outfile, level, name_) for expectedFile_ in self.getExpectedFile(): expectedFile_.export(outfile, level, name_='expectedFile') if self.getExpectedFile() == []: warnEmptyAttribute("expectedFile", "XSDataFile") if self.__expectedSize is not None: self.expectedSize.export(outfile, level, name_='expectedSize') else: warnEmptyAttribute("expectedSize", "XSDataInteger") if self.__timeOut is not None: self.timeOut.export(outfile, level, name_='timeOut')
def exportChildren(self, outfile, level, name_='XSDataInputWaitFile'): XSDataInput.exportChildren(self, outfile, level, name_) if self.__expectedFile is not None: self.expectedFile.export(outfile, level, name_='expectedFile') else: warnEmptyAttribute("expectedFile", "XSDataFile") if self.__expectedSize is not None: self.expectedSize.export(outfile, level, name_='expectedSize') else: warnEmptyAttribute("expectedSize", "XSDataInteger") if self.__timeOut is not None: self.timeOut.export(outfile, level, name_='timeOut')
def exportChildren(self, outfile, level, name_='XSDataInputWaitFile'): XSDataInput.exportChildren(self, outfile, level, name_) if self.__expectedFile is not None: self.expectedFile.export(outfile, level, name_='expectedFile') else: warnEmptyAttribute("expectedFile", "XSDataFile") if self.__expectedSize is not None: self.expectedSize.export(outfile, level, name_='expectedSize') else: warnEmptyAttribute("expectedSize", "XSDataInteger") if self.__timeOut is not None: self.timeOut.export(outfile, level, name_='timeOut')
def exportChildren(self, outfile, level, name_='XSDataInputDozor'): XSDataInput.exportChildren(self, outfile, level, name_) if self._detectorType is not None: self.detectorType.export(outfile, level, name_='detectorType') else: warnEmptyAttribute("detectorType", "XSDataString") if self._exposureTime is not None: self.exposureTime.export(outfile, level, name_='exposureTime') else: warnEmptyAttribute("exposureTime", "XSDataDouble") if self._spotSize is not None: self.spotSize.export(outfile, level, name_='spotSize') else: warnEmptyAttribute("spotSize", "XSDataDouble") if self._detectorDistance is not None: self.detectorDistance.export(outfile, level, name_='detectorDistance') else: warnEmptyAttribute("detectorDistance", "XSDataDouble") if self._wavelength is not None: self.wavelength.export(outfile, level, name_='wavelength') else: warnEmptyAttribute("wavelength", "XSDataDouble") if self._fractionPolarization is not None: self.fractionPolarization.export(outfile, level, name_='fractionPolarization') if self._orgx is not None: self.orgx.export(outfile, level, name_='orgx') else: warnEmptyAttribute("orgx", "XSDataDouble") if self._orgy is not None: self.orgy.export(outfile, level, name_='orgy') else: warnEmptyAttribute("orgy", "XSDataDouble") if self._oscillationRange is not None: self.oscillationRange.export(outfile, level, name_='oscillationRange') else: warnEmptyAttribute("oscillationRange", "XSDataDouble") if self._imageStep is not None: self.imageStep.export(outfile, level, name_='imageStep') if self._startingAngle is not None: self.startingAngle.export(outfile, level, name_='startingAngle') if self._firstImageNumber is not None: self.firstImageNumber.export(outfile, level, name_='firstImageNumber') else: warnEmptyAttribute("firstImageNumber", "XSDataInteger") if self._numberImages is not None: self.numberImages.export(outfile, level, name_='numberImages') else: warnEmptyAttribute("numberImages", "XSDataInteger") if self._nameTemplateImage is not None: self.nameTemplateImage.export(outfile, level, name_='nameTemplateImage') else: warnEmptyAttribute("nameTemplateImage", "XSDataString")
def exportChildren(self, outfile, level, name_='XSDataInputMatrixInvertv2'): XSDataInput.exportChildren(self, outfile, level, name_) if self.__inputMatrix is not None: self.inputMatrix.export(outfile, level, name_='inputMatrix') else: warnEmptyAttribute("inputMatrix", "XSDataImageExt") if self.__outputMatrix is not None: self.outputMatrix.export(outfile, level, name_='outputMatrix') else: warnEmptyAttribute("outputMatrix", "XSDataImageExt")
def exportChildren(self, outfile, level, name_='XSDataInputCalibrateEnergy'): XSDataInput.exportChildren(self, outfile, level, name_) if self._elementName is not None: self.elementName.export(outfile, level, name_='elementName') else: warnEmptyAttribute("elementName", "XSDataString") if self._inputFile is not None: self.inputFile.export(outfile, level, name_='inputFile') else: warnEmptyAttribute("inputFile", "XSDataFile")
def exportChildren(self, outfile, level, name_='XSDataInputMtz2Various'): XSDataInput.exportChildren(self, outfile, level, name_) if self._mtzfile is not None: self.mtzfile.export(outfile, level, name_='mtzfile') else: warnEmptyAttribute("mtzfile", "XSDataFile") for labin_ in self.getLabin(): labin_.export(outfile, level, name_='labin') if self.getLabin() == []: warnEmptyAttribute("labin", "XSDataString") if self._output is not None: self.output.export(outfile, level, name_='output') if self._format is not None: self.format.export(outfile, level, name_='format')
def exportChildren(self, outfile, level, name_='XSDataInputXDSAPP'): XSDataInput.exportChildren(self, outfile, level, name_) if self._image is not None: self.image.export(outfile, level, name_='image') else: warnEmptyAttribute("image", "XSDataFile") if self._startImageNumber is not None: self.startImageNumber.export(outfile, level, name_='startImageNumber') if self._endImageNumber is not None: self.endImageNumber.export(outfile, level, name_='endImageNumber') if self._anomalous is not None: self.anomalous.export(outfile, level, name_='anomalous') if self._spacegroup is not None: self.spacegroup.export(outfile, level, name_='spacegroup')
def exportChildren(self, outfile, level, name_='XSDataInputMXThumbnail'): XSDataInput.exportChildren(self, outfile, level, name_) if self._image is not None: self.image.export(outfile, level, name_='image') else: warnEmptyAttribute("image", "XSDataFile") if self._height is not None: self.height.export(outfile, level, name_='height') if self._width is not None: self.width.export(outfile, level, name_='width') if self._outputPath is not None: self.outputPath.export(outfile, level, name_='outputPath') if self._format is not None: self.format.export(outfile, level, name_='format')
def exportChildren(self, outfile, level, name_='XSDataInputMtz2Various'): XSDataInput.exportChildren(self, outfile, level, name_) if self._mtzfile is not None: self.mtzfile.export(outfile, level, name_='mtzfile') else: warnEmptyAttribute("mtzfile", "XSDataFile") for labin_ in self.getLabin(): labin_.export(outfile, level, name_='labin') if self.getLabin() == []: warnEmptyAttribute("labin", "XSDataString") if self._output is not None: self.output.export(outfile, level, name_='output') if self._format is not None: self.format.export(outfile, level, name_='format')
def exportChildren(self, outfile, level, name_='XSDataInputSimpleHTMLPage'): XSDataInput.exportChildren(self, outfile, level, name_) if self._characterisationResult is not None: self.characterisationResult.export(outfile, level, name_='characterisationResult') if self._characterisationResultv2_0 is not None: self.characterisationResultv2_0.export( outfile, level, name_='characterisationResultv2_0') for fileGraph_ in self.getFileGraph(): fileGraph_.export(outfile, level, name_='fileGraph')
def exportChildren(self, outfile, level, name_='XSDataInputSimpleHTMLPage'): XSDataInput.exportChildren(self, outfile, level, name_) if self.__characterisationResult is not None: self.characterisationResult.export(outfile, level, name_='characterisationResult') else: warnEmptyAttribute("characterisationResult", "XSDataResultCharacterisation") for fileGraph_ in self.getFileGraph(): fileGraph_.export(outfile, level, name_='fileGraph')
def exportChildren(self, outfile, level, name_='XSDataInputMXThumbnail'): XSDataInput.exportChildren(self, outfile, level, name_) if self._image is not None: self.image.export(outfile, level, name_='image') else: warnEmptyAttribute("image", "XSDataFile") if self._height is not None: self.height.export(outfile, level, name_='height') if self._width is not None: self.width.export(outfile, level, name_='width') if self._outputPath is not None: self.outputPath.export(outfile, level, name_='outputPath') if self._format is not None: self.format.export(outfile, level, name_='format')
def exportChildren(self, outfile, level, name_='XSDataInputControlXDSAPP'): XSDataInput.exportChildren(self, outfile, level, name_) if self._dataCollectionId is not None: self.dataCollectionId.export(outfile, level, name_='dataCollectionId') if self._processDirectory is not None: self.processDirectory.export(outfile, level, name_='processDirectory') if self._doAnomAndNonanom is not None: self.doAnomAndNonanom.export(outfile, level, name_='doAnomAndNonanom') if self._hdf5ToCbfDirectory is not None: self.hdf5ToCbfDirectory.export(outfile, level, name_='hdf5ToCbfDirectory') if self._spaceGroup is not None: self.spaceGroup.export(outfile, level, name_='spaceGroup') if self._unitCell is not None: self.unitCell.export(outfile, level, name_='unitCell')
def exportChildren(self, outfile, level, name_='XSDataInputXDSSpotSearch'): XSDataInput.exportChildren(self, outfile, level, name_) for job_ in self.getJob(): job_.export(outfile, level, name_='job') if self.getJob() == []: warnEmptyAttribute("job", "XSDataString") if self.__subWedge is not None: self.subWedge.export(outfile, level, name_='subWedge') else: warnEmptyAttribute("subWedge", "XSDataXDSSubWedge") if self.__detector is not None: self.detector.export(outfile, level, name_='detector') else: warnEmptyAttribute("detector", "XSDataXDSDetector")
def exportChildren(self, outfile, level, name_='XSDataInputHTML2PDF'): XSDataInput.exportChildren(self, outfile, level, name_) for htmlFile_ in self.getHtmlFile(): htmlFile_.export(outfile, level, name_='htmlFile') if self.getHtmlFile() == []: warnEmptyAttribute("htmlFile", "XSDataFile") if self._resultDirectory is not None: self.resultDirectory.export(outfile, level, name_='resultDirectory') if self._paperSize is not None: self.paperSize.export(outfile, level, name_='paperSize') if self._lowQuality is not None: self.lowQuality.export(outfile, level, name_='lowQuality')
def exportChildren(self, outfile, level, name_='XSDataInputCrystFEL'): XSDataInput.exportChildren(self, outfile, level, name_) if self._geomFile is not None: self.geomFile.export(outfile, level, name_='geomFile') else: warnEmptyAttribute("geomFile", "XSDataString") if self._cellFile is not None: self.cellFile.export(outfile, level, name_='cellFile') else: warnEmptyAttribute("cellFile", "XSDataString") if self._imagesFullPathFile is not None: self.imagesFullPathFile.export(outfile, level, name_='imagesFullPathFile') else: warnEmptyAttribute("imagesFullPathFile", "XSDataString")
def exportChildren(self, outfile, level, name_='XSDataInputXDSAPP'): XSDataInput.exportChildren(self, outfile, level, name_) if self._image is not None: self.image.export(outfile, level, name_='image') else: warnEmptyAttribute("image", "XSDataFile") if self._startImageNumber is not None: self.startImageNumber.export(outfile, level, name_='startImageNumber') if self._endImageNumber is not None: self.endImageNumber.export(outfile, level, name_='endImageNumber') if self._anomalous is not None: self.anomalous.export(outfile, level, name_='anomalous') if self._spacegroup is not None: self.spacegroup.export(outfile, level, name_='spacegroup')
def exportChildren(self, outfile, level, name_='XSDataInputXia2DIALS'): XSDataInput.exportChildren(self, outfile, level, name_) for image_ in self.getImage(): image_.export(outfile, level, name_='image') if self.getImage() == []: warnEmptyAttribute("image", "XSDataFile") if self._anomalous is not None: self.anomalous.export(outfile, level, name_='anomalous') if self._spaceGroup is not None: self.spaceGroup.export(outfile, level, name_='spaceGroup') if self._unitCell is not None: self.unitCell.export(outfile, level, name_='unitCell') if self._startFrame is not None: self.startFrame.export(outfile, level, name_='startFrame') if self._endFrame is not None: self.endFrame.export(outfile, level, name_='endFrame')
def exportChildren(self, outfile, level, name_='XSDataInputEpydoc'): XSDataInput.exportChildren(self, outfile, level, name_) if self.__docPath is not None: self.docPath.export(outfile, level, name_='docPath') else: warnEmptyAttribute("docPath", "XSDataFile") for sources_ in self.getSources(): sources_.export(outfile, level, name_='sources') if self.getSources() == []: warnEmptyAttribute("sources", "XSDataFile") if self.__docType is not None: self.docType.export(outfile, level, name_='docType') if self.__verbosity is not None: self.verbosity.export(outfile, level, name_='verbosity') if self.__projectName is not None: self.projectName.export(outfile, level, name_='projectName')