def testParseLabelitDistlOutput(self):
"""
This method test the parsing of the distl.signal_strength results in the log file.
"""
edPluginDistlSignalStrengthThinClientv1_1 = self.createPlugin()
strPathToLabelitLogText = os.path.join(
self.getPluginTestsDataHome(),
"phenix.distl_thin_client_v17_650.txt")
strLabelitLogText = self.readAndParseFile(strPathToLabelitLogText)
xsDataImageQualityIndicators = edPluginDistlSignalStrengthThinClientv1_1.parseLabelitDistlOutput(
strLabelitLogText)
xmlInput1 = self.readAndParseFile(self.__strReferenceInputFile1)
xsDataInputDistlSignalStrength = XSDataInputDistlSignalStrength.parseString(
xmlInput1)
xsDataImageQualityIndicators.setImage(
xsDataInputDistlSignalStrength.getReferenceImage())
strResultDistlSignalStrengthFile = os.path.join(
self.getPluginTestsDataHome(),
"XSDataResultDistlSignalStrengthThinClient_reference.xml")
strResultDistlSignalStrength = self.readAndParseFile(
strResultDistlSignalStrengthFile)
xsDataResultDistlSignalStrength = XSDataResultDistlSignalStrength.parseString(
strResultDistlSignalStrength)
xsDataImageQualityIndicatorsReference = xsDataResultDistlSignalStrength.getImageQualityIndicators(
)
EDAssert.equal(xsDataImageQualityIndicatorsReference.marshal(),
xsDataImageQualityIndicators.marshal())
def postProcess(self, _edObject=None):
"""
Parses the labelit.screen log file and the generated MOSFLM script
"""
EDPluginExecProcessScript.postProcess(self, _edObject)
EDVerbose.DEBUG("EDPluginDistlSignalStrengthv1_1.postProcess")
strLabelitDistlLog = self.readProcessLogFile()
if (strLabelitDistlLog is None):
strErrorMessage = "EDPluginDistlSignalStrengthv1_1.postProcess : Could not read the Labelit log file"
EDVerbose.error(strErrorMessage)
self.addErrorMessage(strErrorMessage)
self.setFailure()
else:
xsDataImageQualityIndicators = self.parseLabelitDistlOutput(strLabelitDistlLog)
xsDataImageQualityIndicators.setImage(self.xsDataImage)
xsDataResultDistlSignalStrength = XSDataResultDistlSignalStrength()
xsDataResultDistlSignalStrength.setImageQualityIndicators(xsDataImageQualityIndicators)
self.setDataOutput(xsDataResultDistlSignalStrength)
def postProcess(self, _edObject=None):
"""
Parses the labelit.screen log file and the generated MOSFLM script
"""
EDPluginExecProcessScript.postProcess(self, _edObject)
self.DEBUG("EDPluginDistlSignalStrengthThinClientv1_1.postProcess")
strLabelitDistlLog = self.readProcessLogFile()
if (strLabelitDistlLog is None):
strErrorMessage = "EDPluginDistlSignalStrengthThinClientv1_1.postProcess : Could not read the Labelit log file"
self.error(strErrorMessage)
self.addErrorMessage(strErrorMessage)
self.setFailure()
else:
xsDataImageQualityIndicators = self.parseLabelitDistlOutput(strLabelitDistlLog)
xsDataImageQualityIndicators.setImage(self.xsDataImage)
xsDataResultDistlSignalStrength = XSDataResultDistlSignalStrength()
xsDataResultDistlSignalStrength.setImageQualityIndicators(xsDataImageQualityIndicators)
self.setDataOutput(xsDataResultDistlSignalStrength)
def testGenerateExecutiveSummary(self):
"""
This method tests the generateExecutiveSummary of the Labelit plugin.
It contains no assert call so the contents of the executive summary is not tested.
"""
edPluginDistlSignalStrengthThinClientv1_1 = self.createPlugin()
xmlInput1 = self.readAndParseFile(self.__strReferenceInputFile1)
edPluginDistlSignalStrengthThinClientv1_1.setDataInput(xmlInput1)
strResultDistlSignalStrengthFile = os.path.join(self.getPluginTestsDataHome(), "XSDataResultDistlSignalStrengthThinClient_reference.xml")
strResultDistlSignalStrength = self.readAndParseFile(strResultDistlSignalStrengthFile)
xsDataResultDistlSignalStrength = XSDataResultDistlSignalStrength.parseString(strResultDistlSignalStrength)
edPluginDistlSignalStrengthThinClientv1_1.setDataOutput(xsDataResultDistlSignalStrength)
edPluginDistlSignalStrengthThinClientv1_1.generateExecutiveSummary(edPluginDistlSignalStrengthThinClientv1_1)
def testParseLabelitDistlOutput(self):
"""
This method test the parsing of the distl.signal_strength results in the log file.
"""
edPluginDistlSignalStrengthThinClientv1_1 = self.createPlugin()
strPathToLabelitLogText = os.path.join(self.getPluginTestsDataHome(), "phenix.distl_thin_client_v17_650.txt")
strLabelitLogText = self.readAndParseFile(strPathToLabelitLogText)
xsDataImageQualityIndicators = edPluginDistlSignalStrengthThinClientv1_1.parseLabelitDistlOutput(strLabelitLogText)
xmlInput1 = self.readAndParseFile(self.__strReferenceInputFile1)
xsDataInputDistlSignalStrength = XSDataInputDistlSignalStrength.parseString(xmlInput1)
xsDataImageQualityIndicators.setImage(xsDataInputDistlSignalStrength.getReferenceImage())
strResultDistlSignalStrengthFile = os.path.join(self.getPluginTestsDataHome(), "XSDataResultDistlSignalStrengthThinClient_reference.xml")
strResultDistlSignalStrength = self.readAndParseFile(strResultDistlSignalStrengthFile)
xsDataResultDistlSignalStrength = XSDataResultDistlSignalStrength.parseString(strResultDistlSignalStrength)
xsDataImageQualityIndicatorsReference = xsDataResultDistlSignalStrength.getImageQualityIndicators()
EDAssert.equal(xsDataImageQualityIndicatorsReference.marshal(), xsDataImageQualityIndicators.marshal())