def loadUIFile(self, fileName):
""" Return the object defined in the Qt Designer file """
uiloader = qt.QUiLoader()
qfile = qt.QFile(os.path.join(__slicer_module__, fileName))
qfile.open(qt.QFile.ReadOnly)
try:
return uiloader.load(qfile)
finally:
qfile.close()
def setup(self):
loader = qt.QUiLoader()
moduleName = 'ScenePerformance' #scriptedModulesPath = '/Users/exxos/Work/Slicer/Slicer4/Slicer-Debug/Slicer-build/lib/Slicer-4.2/qt-scripted-modules'
scriptedModulesPath = eval('slicer.modules.%s.path' %
moduleName.lower())
scriptedModulesPath = os.path.dirname(scriptedModulesPath)
path = os.path.join(scriptedModulesPath, 'Resources', 'UI',
'ScenePerformance.ui')
qfile = qt.QFile(path)
qfile.open(qt.QFile.ReadOnly)
widget = loader.load(qfile, self.parent)
self.layout = self.parent.layout()
self.layout.addWidget(widget)
self.reloadButton = qt.QPushButton("Reload")
self.reloadButton.toolTip = "Reload this module."
self.reloadButton.name = "ScenePerformance Reload"
self.layout.addWidget(self.reloadButton)
self.reloadButton.connect('clicked()', self.reloadModule)
self.runTestsButton = qt.QPushButton("Run tests")
self.runTestsButton.toolTip = "Run all the tests."
self.runTestsButton.name = "Run tests"
self.layout.addWidget(self.runTestsButton)
self.runTestsButton.connect('clicked()', self.runTests)
self.TimePushButton = self.findWidget(self.parent, 'TimePushButton')
self.ActionComboBox = self.findWidget(self.parent, 'ActionComboBox')
self.ActionPathLineEdit = self.findWidget(self.parent,
'ActionPathLineEdit')
self.ResultsTextEdit = self.findWidget(self.parent, 'ResultsTextEdit')
self.URLLineEdit = self.findWidget(self.parent, 'URLLineEdit')
self.URLFileNameLineEdit = self.findWidget(self.parent,
'URLFileNameLineEdit')
self.SceneViewSpinBox = self.findWidget(self.parent,
'SceneViewSpinBox')
self.LayoutSpinBox = self.findWidget(self.parent, 'LayoutSpinBox')
self.MRMLNodeComboBox = self.findWidget(self.parent,
'MRMLNodeComboBox')
self.RepeatSpinBox = self.findWidget(self.parent, 'RepeatSpinBox')
widget.setMRMLScene(slicer.mrmlScene)
#self.MRMLNodeComboBox.setMRMLScene(slicer.mrmlScene)
self.TimePushButton.connect('clicked()', self.timeAction)
self.ActionComboBox.connect('currentIndexChanged(int)',
self.updateActionProperties)
self.updateActionProperties()
def loadUi(self, uiFileName):
loader = qt.QUiLoader()
scriptedModulesPath = eval('slicer.modules.%s.path' % self.moduleName.replace(" ", "").lower())
scriptedModulesPath = os.path.dirname(scriptedModulesPath)
path = os.path.join(scriptedModulesPath, 'Resources', 'UI', uiFileName)
qfile = qt.QFile(path)
qfile.open(qt.QFile.ReadOnly)
uiWidget = loader.load(qfile)
uiWidget.setAutoFillBackground(False)
uiWidget.setPalette(slicer.app.palette())
self.layout.setContentsMargins(0,0,0,0)
self.layout.addWidget(uiWidget)
self.widget = uiWidget
def loadUi(self, uiFileName):
loader = qt.QUiLoader()
moduleName = 'Workflow'
scriptedModulesPath = eval('slicer.modules.%s.path' %
moduleName.lower())
scriptedModulesPath = os.path.dirname(scriptedModulesPath)
path = os.path.join(scriptedModulesPath, 'Widgets', 'Resources', 'UI',
uiFileName)
qfile = qt.QFile(path)
qfile.open(qt.QFile.ReadOnly)
widget = loader.load(qfile)
widget.setAutoFillBackground(False)
widget.setPalette(slicer.app.palette())
return widget
def createUserInterface(self):
font = qt.QFont("Sans Serif", 12, qt.QFont.Bold)
self.__layout = self.__parent.createUserInterface()
self.__layout = qt.QFormLayout(self)
loader = qt.QUiLoader()
path = 'C:\Users\Camilo_Q\Documents\GitHub\simuladorTornillosPediculares\Interfaz Grafica\MenuProfesor.ui'
moduleName = 'simuladorTornillosPediculares'
scriptedModulesPath = eval(
'slicer.modules.%s.path' %
moduleName.lower()) # devuelve la ruta del .py
scriptedModulesPath = os.path.dirname(
scriptedModulesPath) # lleva a la carpeta del modulo
path = os.path.join(scriptedModulesPath, 'Interfaz Grafica',
'%s.ui' % self.stepid)
qfile = qt.QFile(path)
qfile.open(qt.QFile.ReadOnly)
widget = loader.load(qfile)
self.widget = widget
self.__layout.addWidget(widget)
self.widget.setMRMLScene(slicer.mrmlScene)
self.seleccionDeEstudianteComboBox = self.findWidget(
self.widget, 'seleccionDeEstudianteComboBox')
self.cargarPushButton = self.findWidget(self.widget,
'cargarPushButton')
self.cargarPushButton.connect('clicked(bool)', self.onApplyCargar)
con = mysql.connector.connect(user="******",
password="******",
host="127.0.0.1",
database="basedatos_simulador_ttp")
cursor = con.cursor()
estudiantes = []
cursor.execute("SELECT * FROM estudiantes")
rows = cursor.fetchall()
for row in rows:
estudiantes.append(row)
for i in range(0, len(estudiantes)):
self.seleccionDeEstudianteComboBox.addItem(estudiantes[i][1])
def __init__(self):
'''
Constructor
'''
"""
path=slicer.modules.usguidedprocedure.path
modulePath=os.path.dirname(path)
loadedDataGUIfile=os.path.join(modulePath,"USGuidedWizard/loadedData.ui")
f = qt.QFile(loadedDataGUIfile)
#f = qt.QFile('C:/Users/Usuario/devel/slicelets/USGuidedProcedure/USGuidedWizard/fiducials.ui')
f.open(qt.QFile.ReadOnly)
loader = qt.QUiLoader()
self.loadedDataWidget = loader.load(f)
f.close()
"""
# UI from QtDesigner -----------------------------------------------------------------------------
path=slicer.modules.stylusbasedusprobecalibration.path
modulePath=os.path.dirname(path)
fiducialsStepGUIfile=os.path.join(modulePath,"GUI/fiducials.ui")
f = qt.QFile(fiducialsStepGUIfile)
#f = qt.QFile('C:/Users/Usuario/devel/slicelets/USGuidedProcedure/USGuidedWizard/fiducials.ui')
f.open(qt.QFile.ReadOnly)
loader = qt.QUiLoader()
self.fiducialsWidget = loader.load(f)
f.close()
# connect signals and slots
self.fiducialsWidget.fiducialsList.connect('cellChanged(int ,int )', self.onFiducialNameChanged)
self.fiducialsWidget.placeFiducialButton.connect('clicked(bool)', self.onPlaceFiducialButtomClicked)
self.fiducialsWidget.removeFiducialButton.connect('clicked(bool)', self.onRemoveFiducialButtonClicked)
self.fiducialsWidget.clearFiducialsListButton.connect('clicked(bool)', self.onClearFiducialsListButtonClicked)
self.fiducialsWidget.fiducialsList.itemClicked.connect(self.onFiducialsListClicked)
#listeners
#self.listenToAnnotations()
self.updatingList = False
self.placeImageFiducialStep=False
pixmap=qt.QPixmap("Resources/Icons/AnnotationPointWithArrow.png")
self.placeFiducialCursor= qt.QCursor(pixmap)
def setup(self):
import imp, sys, os, slicer
loader = qt.QUiLoader()
moduleName = 'SkinModelMaker'
scriptedModulesPath = eval('slicer.modules.%s.path' %
moduleName.lower())
scriptedModulesPath = os.path.dirname(scriptedModulesPath)
path = os.path.join(scriptedModulesPath, 'Resources', 'UI',
'SkinModelMaker.ui')
qfile = qt.QFile(path)
qfile.open(qt.QFile.ReadOnly)
widget = loader.load(qfile, self.parent)
self.layout = self.parent.layout()
self.widget = widget
self.layout.addWidget(widget)
# Uncomment this vvvv and reloadModule function for faster development
# self.reloadButton = qt.QPushButton("Reload")
# self.reloadButton.toolTip = "Reload this module."
# self.reloadButton.name = "SkinModelMaker Reload"
# self.layout.addWidget(self.reloadButton)
# self.reloadButton.connect('clicked()', self.reloadModule)
# Logic
self.Logic = SkinModelMakerLogic()
#
# Signals / Slots
#
self.get('ApplyPushButton').connect('clicked(bool)', self.onApply)
# --------------------------------------------------------------------------
# Initialize all the MRML aware GUI elements.
# Lots of setup methods are called from this line
self.widget.setMRMLScene(slicer.mrmlScene)
def createUserInterface(self):
font = qt.QFont("Sans Serif", 12, qt.QFont.Bold)
self.__layout = self.__parent.createUserInterface()
self.__layout = qt.QFormLayout(self)
moduleName = 'simuladorTornillosPediculares'
scriptedModulesPath = eval(
'slicer.modules.%s.path' %
moduleName.lower()) # devuelve la ruta del .py
scriptedModulesPath = os.path.dirname(
scriptedModulesPath) # lleva a la carpeta del modulo
path = os.path.join(scriptedModulesPath, 'Interfaz Grafica',
'%s.ui' % self.stepid)
loader = qt.QUiLoader()
#path1='C:\Users\Camilo_Q\Documents\GitHub\simuladorTornillosPediculares\Interfaz Grafica\Inicio.ui'
qfile = qt.QFile(path)
qfile.open(qt.QFile.ReadOnly)
widget = loader.load(qfile)
self.widget = widget
self.__layout.addWidget(widget)
self.widget.setMRMLScene(slicer.mrmlScene)
self.nombreEditText = self.findWidget(self.widget, 'nombreEditText')
self.contrasenaEditText = self.findWidget(self.widget,
'contrasenaEditText')
self.profesorCheckBox = self.findWidget(self.widget,
'profesorCheckBox')
self.estudianteCheckBox = self.findWidget(self.widget,
'estudianteCheckBox')
self.eresNuevoCheckBox = self.findWidget(self.widget,
'eresNuevoCheckBox')
self.nombreEditText.textChanged.connect(self.textchanged1)
self.contrasenaEditText.textChanged.connect(self.textchanged2)
def setup(self):
ScriptedLoadableModuleWidget.setup(self)
print "-------Easy Clip Widget Setup---------"
# GLOBALS:
self.logic = EasyClipLogic(self)
self.ignoredNodeNames = ('Red Volume Slice', 'Yellow Volume Slice',
'Green Volume Slice')
self.colorSliceVolumes = dict()
self.dictionnaryModel = dict()
self.hardenModelIDdict = dict()
self.landmarkDescriptionDict = dict()
self.planeControlsDictionary = {}
# Instantiate and connect widgets
#
# Interface
#
loader = qt.QUiLoader()
moduleName = 'EasyClip'
scriptedModulesPath = eval('slicer.modules.%s.path' %
moduleName.lower())
scriptedModulesPath = os.path.dirname(scriptedModulesPath)
path = os.path.join(scriptedModulesPath, 'Resources', 'UI',
'%s.ui' % moduleName)
qfile = qt.QFile(path)
qfile.open(qt.QFile.ReadOnly)
widget = loader.load(qfile, self.parent)
self.layout = self.parent.layout()
self.widget = widget
self.layout.addWidget(widget)
##--------------------------- Scene --------------------------#
self.SceneCollapsibleButton = self.logic.get(
"SceneCollapsibleButton"
) # this atribute is usefull for Longitudinal quantification extension
treeView = self.logic.get("treeView")
treeView.setMRMLScene(slicer.app.mrmlScene())
treeView.sceneModel().setHorizontalHeaderLabels(["Models"])
treeView.sortFilterProxyModel().nodeTypes = ['vtkMRMLModelNode']
treeView.header().setVisible(False)
self.autoChangeLayout = self.logic.get("autoChangeLayout")
self.computeBox = self.logic.get("computeBox")
self.computeBox.connect('clicked()', self.onComputeBox)
#--------------------------- Clipping Part --------------------------#
# CLIPPING BUTTONS
self.red_plane_box = self.logic.get("red_plane_box")
self.radio_red_Neg = self.logic.get("radio_red_Neg")
self.radio_red_Neg.setIcon(qt.QIcon(":/Icons/RedSpaceNegative.png"))
self.radio_red_Pos = self.logic.get("radio_red_Pos")
self.radio_red_Pos.setIcon(qt.QIcon(":/Icons/RedSpacePositive.png"))
self.red_plane_box.connect(
'clicked(bool)', lambda: self.logic.onCheckBoxClicked(
'Red', self.red_plane_box, self.radio_red_Neg))
self.red_plane_box.connect(
'clicked(bool)', lambda: self.updateSliceState(
"vtkMRMLSliceNodeRed", self.red_plane_box.isChecked(),
self.radio_red_Neg.isChecked(), self.radio_red_Pos.isChecked())
)
self.radio_red_Neg.connect(
'clicked(bool)', lambda: self.updateSliceState(
"vtkMRMLSliceNodeRed", self.red_plane_box.isChecked(),
self.radio_red_Neg.isChecked(), self.radio_red_Pos.isChecked())
)
self.radio_red_Pos.connect(
'clicked(bool)', lambda: self.updateSliceState(
"vtkMRMLSliceNodeRed", self.red_plane_box.isChecked(),
self.radio_red_Neg.isChecked(), self.radio_red_Pos.isChecked())
)
self.yellow_plane_box = self.logic.get("yellow_plane_box")
self.radio_yellow_Neg = self.logic.get("radio_yellow_Neg")
self.radio_yellow_Neg.setIcon(
qt.QIcon(":/Icons/YellowSpaceNegative.png"))
self.radio_yellow_Pos = self.logic.get("radio_yellow_Pos")
self.radio_yellow_Pos.setIcon(
qt.QIcon(":/Icons/YellowSpacePositive.png"))
self.yellow_plane_box.connect(
'clicked(bool)', lambda: self.logic.onCheckBoxClicked(
'Yellow', self.yellow_plane_box, self.radio_yellow_Neg))
self.yellow_plane_box.connect(
'clicked(bool)', lambda: self.updateSliceState(
"vtkMRMLSliceNodeYellow", self.yellow_plane_box.isChecked(),
self.radio_yellow_Neg.isChecked(),
self.radio_yellow_Pos.isChecked()))
self.radio_yellow_Neg.connect(
'clicked(bool)', lambda: self.updateSliceState(
"vtkMRMLSliceNodeYellow", self.yellow_plane_box.isChecked(),
self.radio_yellow_Neg.isChecked(),
self.radio_yellow_Pos.isChecked()))
self.radio_yellow_Pos.connect(
'clicked(bool)', lambda: self.updateSliceState(
"vtkMRMLSliceNodeYellow", self.yellow_plane_box.isChecked(),
self.radio_yellow_Neg.isChecked(),
self.radio_yellow_Pos.isChecked()))
self.green_plane_box = self.logic.get("green_plane_box")
self.radio_green_Neg = self.logic.get("radio_green_Neg")
self.radio_green_Neg.setIcon(
qt.QIcon(":/Icons/GreenSpaceNegative.png"))
self.radio_green_Pos = self.logic.get("radio_green_Pos")
self.radio_green_Pos.setIcon(
qt.QIcon(":/Icons/GreenSpacePositive.png"))
self.green_plane_box.connect(
'clicked(bool)', lambda: self.logic.onCheckBoxClicked(
'Green', self.green_plane_box, self.radio_green_Neg))
self.green_plane_box.connect(
'clicked(bool)', lambda: self.updateSliceState(
"vtkMRMLSliceNodeGreen", self.green_plane_box.isChecked(),
self.radio_green_Neg.isChecked(),
self.radio_green_Pos.isChecked()))
self.radio_green_Neg.connect(
'clicked(bool)', lambda: self.updateSliceState(
"vtkMRMLSliceNodeGreen", self.green_plane_box.isChecked(),
self.radio_green_Neg.isChecked(),
self.radio_green_Pos.isChecked()))
self.radio_green_Pos.connect(
'clicked(bool)', lambda: self.updateSliceState(
"vtkMRMLSliceNodeGreen", self.green_plane_box.isChecked(),
self.radio_green_Neg.isChecked(),
self.radio_green_Pos.isChecked()))
self.ClippingButton = self.logic.get("ClippingButton")
self.ClippingButton.connect('clicked()', self.ClippingButtonClicked)
self.UndoButton = self.logic.get("UndoButton")
self.UndoButton.connect('clicked()', self.UndoButtonClicked)
# -------------------------------- PLANES --------------------------------#
self.CollapsibleButton3 = self.logic.get("CollapsibleButton3")
self.save = self.logic.get("save")
self.read = self.logic.get("read")
self.save.connect('clicked(bool)', self.savePlane)
self.read.connect('clicked(bool)', self.readPlane)
#-------------------- onCloseScene ----------------------#
slicer.mrmlScene.AddObserver(slicer.mrmlScene.EndCloseEvent,
self.onCloseScene)
def setup(self):
ScriptedLoadableModuleWidget.setup(self)
print "-------Mesh Statistic Widget Setup-------"
self.moduleName = 'MeshStatistics'
scriptedModulesPath = eval('slicer.modules.%s.path' %
self.moduleName.lower())
scriptedModulesPath = os.path.dirname(scriptedModulesPath)
libPath = os.path.join(scriptedModulesPath)
sys.path.insert(0, libPath)
# import the external library that contain the functions comon to all DCBIA modules
import ShapeQuantifierCore
reload(ShapeQuantifierCore)
# -------------------------------------------------------------------------------------
self.ShapeQuantifierCore = ShapeQuantifierCore.ShapeQuantifierCore(
interface=self)
self.logic = MeshStatisticsLogic(self, ShapeQuantifierCore)
self.modelList = list()
self.fieldList = list()
self.ROIList = list()
self.ROIDict = dict() # Key = Name of ROI
# Value = Dictionary of Fields (key = Name of Field
# Value = dictionary of shapes
# key = name of shapes
# value = Statistics store()
# ---------------------------------------------------------------- #
# ---------------- Definition of the UI interface ---------------- #
# ---------------------------------------------------------------- #
# ------------ Loading of the .ui file ---------- #
loader = qt.QUiLoader()
path = os.path.join(scriptedModulesPath, 'Resources', 'UI',
'%s.ui' % self.moduleName)
qfile = qt.QFile(path)
qfile.open(qt.QFile.ReadOnly)
widget = loader.load(qfile, self.parent)
self.layout = self.parent.layout()
self.widget = widget
self.layout.addWidget(widget)
# ------------------------------------------------------------------------------------
# SHAPES INPUT
# ------------------------------------------------------------------------------------
self.inputComboBox = self.ShapeQuantifierCore.get("inputComboBox")
self.inputComboBox.setMRMLScene(slicer.mrmlScene)
self.inputComboBox.connect('checkedNodesChanged()',
self.onInputComboBoxCheckedNodesChanged)
# ------------------------------------------------------------------------------------
# ROI TABLE
# ------------------------------------------------------------------------------------
self.ROIComboBox = self.ShapeQuantifierCore.get("ROIComboBox")
self.ROICheckBox = self.ShapeQuantifierCore.get("ROICheckBox")
self.ROICheckBox.connect('stateChanged(int)',
self.onROICheckBoxStateChanged)
# ------------------------------------------------------------------------------------
# FIELD TABLE
# ------------------------------------------------------------------------------------
self.tableField = self.ShapeQuantifierCore.get("tableField")
self.tableField.setColumnCount(2)
self.tableField.setMinimumHeight(250)
self.tableField.setHorizontalHeaderLabels([' ', ' Field Name '])
self.tableField.setColumnWidth(0, 20)
self.tableField.setColumnWidth(1, 260)
self.tableField.setSizePolicy(qt.QSizePolicy().Expanding,
qt.QSizePolicy().Expanding)
# ------------------------------------------------------------------------------------
# RUN
# ------------------------------------------------------------------------------------
self.runButton = self.ShapeQuantifierCore.get("runButton")
self.runButton.connect('clicked()', self.onRunButton)
# ------------------------------------------------------------------------------------
# Statistics Table - Export
# ------------------------------------------------------------------------------------
self.mainLayout = self.ShapeQuantifierCore.get("mainLayout")
self.tabROI = qt.QTabWidget()
self.tabROI.setTabPosition(0)
self.tabROI.adjustSize()
# ---------------------------- Directory - Export Button -----------------------------
self.directoryExport = ctk.ctkDirectoryButton()
self.exportCheckBox = qt.QCheckBox('Separate Files')
self.exportCheckBox.setChecked(True)
self.exportButton = qt.QPushButton(' Export ')
self.exportButton.enabled = True
self.exportPointValueCheckBox = qt.QCheckBox(
'Export Value on Each Point')
self.exportLayout = qt.QVBoxLayout()
self.directoryAndExportLayout = qt.QHBoxLayout()
self.directoryAndExportLayout.addWidget(self.directoryExport)
self.directoryAndExportLayout.addWidget(self.exportCheckBox)
self.directoryAndExportLayout.addWidget(self.exportPointValueCheckBox)
self.exportButtonsLayout = qt.QHBoxLayout()
self.exportButtonsLayout.addWidget(self.exportButton)
self.exportLayout.addLayout(self.directoryAndExportLayout)
self.exportLayout.addLayout(self.exportButtonsLayout)
self.layout.addStretch(1)
self.logic.updateInterface(self.tableField, self.ROIComboBox,
self.ROIList, self.modelList,
self.mainLayout)
# ------------------------------------------------------------------------------------
# OBSERVERS
# ------------------------------------------------------------------------------------
slicer.mrmlScene.AddObserver(slicer.mrmlScene.EndCloseEvent,
self.onCloseScene)
def setup(self):
slicer.ScriptedLoadableModule.ScriptedLoadableModuleWidget.setup(self)
print "----- Shape Quantifier widget setup -----"
self.moduleName = 'ShapeQuantifier'
scriptedModulesPath = eval('slicer.modules.%s.path' % self.moduleName.lower())
scriptedModulesPath = os.path.dirname(scriptedModulesPath)
libPath = os.path.join(scriptedModulesPath)
sys.path.insert(0, libPath)
# import the external library that contain the functions comon to all DCBIA modules
import ShapeQuantifierCore
reload(ShapeQuantifierCore)
# ------ Initialisation of Shape Quantifier and its logic ----- #
self.ShapeQuantifierCore = ShapeQuantifierCore.ShapeQuantifierCore(interface = self)
self.logic = ShapeQuantifierLogic(self, self.ShapeQuantifierCore)
# ---------------------------------------------------------------- #
# ---------------- Definition of the UI interface ---------------- #
# ---------------------------------------------------------------- #
# ------------ Loading of the .ui file ---------- #
loader = qt.QUiLoader()
path = os.path.join(scriptedModulesPath, 'Resources', 'UI', '%s.ui' %self.moduleName)
qfile = qt.QFile(path)
qfile.open(qt.QFile.ReadOnly)
widget = loader.load(qfile, self.parent)
self.layout = self.parent.layout()
self.widget = widget
self.layout.addWidget(widget)
# ------ Scene Collapsible Button ----- #
self.SceneCollapsibleButton = self.ShapeQuantifierCore.get("SceneCollapsibleButton")
treeView = self.ShapeQuantifierCore.get("treeView")
treeView.setMRMLScene(slicer.app.mrmlScene())
treeView.sortFilterProxyModel().nodeTypes = ['vtkMRMLModelNode','vtkMRMLMarkupsFiducialNode']
sceneModel = treeView.sceneModel()
sceneModel.colorColumn = 1
sceneModel.opacityColumn = 2
treeViewHeader = treeView.header()
treeViewHeader.setVisible(False)
treeViewHeader.setStretchLastSection(False)
treeViewHeader.setResizeMode(sceneModel.nameColumn,qt.QHeaderView.Stretch)
treeViewHeader.setResizeMode(sceneModel.colorColumn,qt.QHeaderView.ResizeToContents)
treeViewHeader.setResizeMode(sceneModel.opacityColumn,qt.QHeaderView.ResizeToContents)
self.computeBoxPushButton = self.ShapeQuantifierCore.get("computeBoxPushButton")
# ------ Step Group Box ----- #
self.ModelRadioGroupBox = self.ShapeQuantifierCore.get("ModelRadioGroupBox")
self.ModelRadioGroupBox.hide()
self.Model1RadioButton = self.ShapeQuantifierCore.get("Model1RadioButton")
self.ShapeQuantifierCore.get("verticalLayout_4").setAlignment(0x84)
self.Model2RadioButton = self.ShapeQuantifierCore.get("Model2RadioButton")
self.ShapeQuantifierCore.get("verticalLayout_5").setAlignment(0x84)
# ------ Data selection Collapsible Button ----- #
self.DataSelectionCollapsibleButton = self.ShapeQuantifierCore.get("DataSelectionCollapsibleButton")
self.SingleModelRadioButton = self.ShapeQuantifierCore.get("SingleModelRadioButton")
self.TwoModelsRadioButton = self.ShapeQuantifierCore.get("TwoModelsRadioButton")
self.ShapeQuantifierCore.get("verticalLayout_6").setAlignment(0x84)
self.ShapeQuantifierCore.get("verticalLayout_7").setAlignment(0x84)
self.Model1groupBox = self.ShapeQuantifierCore.get("Model1groupBox")
self.Model1MRMLNodeComboBox = self.ShapeQuantifierCore.get("Model1MRMLNodeComboBox")
self.Model1MRMLNodeComboBox.setMRMLScene(slicer.mrmlScene)
self.FidList1MRMLNodeComboBox = self.ShapeQuantifierCore.get("FidList1MRMLNodeComboBox")
self.FidList1MRMLNodeComboBox.setMRMLScene(slicer.mrmlScene)
self.Model2groupBox = self.ShapeQuantifierCore.get("Model2groupBox")
self.Model2MRMLNodeComboBox = self.ShapeQuantifierCore.get("Model2MRMLNodeComboBox")
self.Model2MRMLNodeComboBox.setMRMLScene(slicer.mrmlScene)
self.FidList2MRMLNodeComboBox = self.ShapeQuantifierCore.get("FidList2MRMLNodeComboBox")
self.FidList2MRMLNodeComboBox.setMRMLScene(slicer.mrmlScene)
self.ExternalModuleTabDict = dict()
# ------ Eternal Modules Selections ----- #
listOfTab = ["Preprocessing","Quantification","Analysis"]
for tab in listOfTab:
self.ExternalModuleTabDict[tab] = ExternalModuleTab()
self.ExternalModuleTabDict[tab].collapsibleButton = self.ShapeQuantifierCore.get(tab + "CollapsibleButton")
self.ExternalModuleTabDict[tab].layout = self.ShapeQuantifierCore.get(tab + "Layout")
self.ExternalModuleTabDict[tab].choiceComboBox = self.ShapeQuantifierCore.get(tab + "ChoiceComboBox")
# ------------------------------------------------------------------------------ #
# ---------------- Setup and initialisation of global variables ---------------- #
# ------------------------------------------------------------------------------ #
# ------ Initialisation of the other modules is Slicer, if that's not already done ----- #
if not hasattr(slicer.modules, 'AnglePlanesWidget'):
slicer.modules.angleplanes.createNewWidgetRepresentation()
if not hasattr(slicer.modules, 'EasyClipWidget'):
slicer.modules.easyclip.createNewWidgetRepresentation()
if not hasattr(slicer.modules, 'MeshStatisticsWidget'):
slicer.modules.meshstatistics.createNewWidgetRepresentation()
if not hasattr(slicer.modules, 'PickAndPaintWidget'):
slicer.modules.pickandpaint.createNewWidgetRepresentation()
if not hasattr(slicer.modules, 'Q3DCWidget'):
slicer.modules.q3dc.createNewWidgetRepresentation()
if not hasattr(slicer.modules, 'SurfaceRegistrationWidget'):
slicer.modules.surfaceregistration.createNewWidgetRepresentation()
# ------ Creation of a dictionary that will contain the pythons modules ----- #
self.ExternalPythonModules = dict()
self.ExternalPythonModules["Angle Planes"] = slicer.modules.AnglePlanesWidget
self.ExternalPythonModules["Easy Clip"] = slicer.modules.EasyClipWidget
self.ExternalPythonModules["Mesh Statistics"] = slicer.modules.MeshStatisticsWidget
self.ExternalPythonModules["Pick and Paint"] = slicer.modules.PickAndPaintWidget
self.ExternalPythonModules["Q3DC"] = slicer.modules.Q3DCWidget
self.ExternalPythonModules["Surface Registration"] = slicer.modules.SurfaceRegistrationWidget
# ------ Creation of a dictionary that will contain the CLI modules ----- #
self.ExternalCLIModules = dict()
self.ExternalCLIModules["Model to Model Distance"] = slicer.modules.modeltomodeldistance
self.ExternalCLIModules["Shape Population Viewer"] = slicer.modules.launcher
# ------ Creation of a dictionary that will contain all the modules ----- #
self.ExternalModulesDict = dict(self.ExternalPythonModules, **self.ExternalCLIModules)
# ------ Setup of the external Python modules ------ #
# Hiding of the scene tabs and the input tabs in
# all the external modules to avoid redundancies
# and make this module as clear and simple as possible
#This part of the setup is now made in the enter function
# ------ Setup of the external CLI modules ------ #
# Setting the size to the good value
for key, value in self.ExternalCLIModules.iteritems():
value.widgetRepresentation().setSizePolicy(1,1)
value.widgetRepresentation().adjustSize()
# --------------------------------------------- #
# ---------------- Connections ---------------- #
# --------------------------------------------- #
# ------ Scene Collapsible Button ----- #
self.SceneCollapsibleButton.\
connect('clicked()', lambda: self.onSelectedCollapsibleButtonChanged(self.SceneCollapsibleButton))
self.computeBoxPushButton.connect('clicked()', self.ExternalModulesDict["Easy Clip"].onComputeBox)
# ------ Step Group Box ----- #
self.Model1RadioButton.connect('clicked()', self.propagationOfInputDataToExternalModules)
self.Model2RadioButton.connect('clicked()', self.propagationOfInputDataToExternalModules)
# ------ Data selection Collapsible Button ----- #
self.DataSelectionCollapsibleButton.\
connect('clicked()', lambda: self.onSelectedCollapsibleButtonChanged(self.DataSelectionCollapsibleButton))
self.SingleModelRadioButton.connect('clicked()', lambda: self.onNumberOfModelForMeasureChange(True))
self.TwoModelsRadioButton.connect('clicked()', lambda: self.onNumberOfModelForMeasureChange(False))
self.Model1MRMLNodeComboBox.connect('currentNodeChanged(vtkMRMLNode*)', self.propagationOfInputDataToExternalModules)
self.FidList1MRMLNodeComboBox.connect('currentNodeChanged(vtkMRMLNode*)', self.propagationOfInputDataToExternalModules)
self.Model2MRMLNodeComboBox.connect('currentNodeChanged(vtkMRMLNode*)', self.propagationOfInputDataToExternalModules)
self.FidList2MRMLNodeComboBox.connect('currentNodeChanged(vtkMRMLNode*)', self.propagationOfInputDataToExternalModules)
# ------ Eternal Modules Selections ----- #
for key, ExternalModule in self.ExternalModuleTabDict.iteritems():
ExternalModule.collapsibleButton.connect('clicked()',
lambda currentCollapsibleButton = ExternalModule.collapsibleButton:
self.onSelectedCollapsibleButtonChanged(currentCollapsibleButton))
ExternalModule.choiceComboBox.connect('currentIndexChanged(QString)',
lambda newModule, currentCombobox = ExternalModule.choiceComboBox:
self.onExternalModuleChangement(newModule, currentCombobox))
# ------ Closing of the scene -----#
slicer.mrmlScene.AddObserver(slicer.mrmlScene.EndCloseEvent, self.onCloseScene)
self.enter()
def create(self):
# Instantiate and connect widgets ...
loader = qt.QUiLoader()
path = os.path.join(os.path.dirname(__file__), 'Resources', 'UI','settings.ui')
qfile = qt.QFile(path)
qfile.open(qt.QFile.ReadOnly)
self.window = loader.load(qfile)
self.cornerTextParametersCollapsibleButton = slicer.util.findChildren(self.window,
'cornerTextParametersCollapsibleButton')[0]
self.sliceViewAnnotationsCheckBox = slicer.util.findChildren(self.window,
'sliceViewAnnotationsCheckBox')[0]
self.sliceViewAnnotationsCheckBox.checked = self.showSliceViewAnnotations
self.activateCornersGroupBox = slicer.util.findChildren(self.window,
'activateCornersGroupBox')[0]
self.topLeftActivationCheckbox = slicer.util.findChildren(self.window,
'topLeftActivationCheckbox')[0]
self.topLeftActivationCheckbox.checked = self.topLeftAnnotationDisplay
self.topRightActivationCheckbox = slicer.util.findChildren(self.window,
'topRightActivationCheckbox')[0]
self.topRightActivationCheckbox.checked = self.topRightAnnotationDisplay
self.bottomLeftActivationCheckbox = slicer.util.findChildren(self.window,
'bottomLeftActivationCheckbox')[0]
self.bottomLeftActivationCheckbox.checked = self.bottomLeftAnnotationDisplay
self.level1RadioButton = slicer.util.findChildren(self.window,
'level1RadioButton')[0]
self.level2RadioButton = slicer.util.findChildren(self.window,
'level2RadioButton')[0]
self.level3RadioButton = slicer.util.findChildren(self.window,
'level3RadioButton')[0]
self.fontPropertiesGroupBox = slicer.util.findChildren(self.window,
'fontPropertiesGroupBox')[0]
self.timesFontRadioButton = slicer.util.findChildren(self.window,
'timesFontRadioButton')[0]
self.arialFontRadioButton = slicer.util.findChildren(self.window,
'arialFontRadioButton')[0]
if self.fontFamily == 'Times':
self.timesFontRadioButton.checked = True
else:
self.arialFontRadioButton.checked = True
self.fontSizeSpinBox = slicer.util.findChildren(self.window,
'fontSizeSpinBox')[0]
self.fontSizeSpinBox.value = self.fontSize
self.backgroundLayerPersistenceCheckbox = slicer.util.findChildren(self.window,
'backgroundLayerPersistenceCheckbox')[0]
self.backgroundLayerPersistenceCheckbox.checked = self.backgroundDicomAnnotationsPersistence
self.annotationsAmountGroupBox = slicer.util.findChildren(self.window,
'annotationsAmountGroupBox')[0]
self.scalingRulerCollapsibleButton = slicer.util.findChildren(self.window,
'scalingRulerCollapsibleButton')[0]
self.showScalingRulerCheckBox = slicer.util.findChildren(self.window,
'showScalingRulerCheckBox')[0]
self.showScalingRulerCheckBox.checked = self.showScalingRuler
self.colorScalarBarCollapsibleButton = slicer.util.findChildren(self.window,
'colorScalarBarCollapsibleButton')[0]
self.showColorScalarBarCheckBox = slicer.util.findChildren(self.window,
'showColorScalarBarCheckBox')[0]
self.showColorScalarBarCheckBox.checked = self.showColorScalarBar
self.colorBarLayerSelectionGroupBox = slicer.util.findChildren(self.window,
'colorBarLayerSelectionGroupBox')[0]
self.backgroundRadioButton = slicer.util.findChildren(self.window,
'backgroundRadioButton')[0]
self.backgroundRadioButton.checked = True
self.foregroundRadioButton = slicer.util.findChildren(self.window,
'foregroundRadioButton')[0]
self.colorScalarBarMaxWidthSlider = slicer.util.findChildren(self.window,
'colorScalarBarMaxWidthSlider')[0]
restorDefaultsButton = slicer.util.findChildren(self.window,
'restoreDefaultsButton')[0]
# connections
self.sliceViewAnnotationsCheckBox.connect('clicked()', self.onSliceViewAnnotationsCheckbox)
self.topLeftActivationCheckbox.connect('clicked()', self.onCornerTextsActivationCheckbox)
self.topRightActivationCheckbox.connect('clicked()', self.onCornerTextsActivationCheckbox)
self.bottomLeftActivationCheckbox.connect('clicked()', self.onCornerTextsActivationCheckbox)
self.timesFontRadioButton.connect('clicked()', self.onFontFamilyRadioButton)
self.arialFontRadioButton.connect('clicked()', self.onFontFamilyRadioButton)
self.fontSizeSpinBox.connect('valueChanged(int)', self.onFontSizeSpinBox)
self.level1RadioButton.connect('clicked()', self.updateSliceViewFromGUI)
self.level2RadioButton.connect('clicked()', self.updateSliceViewFromGUI)
self.level3RadioButton.connect('clicked()', self.updateSliceViewFromGUI)
self.backgroundLayerPersistenceCheckbox.connect('clicked()', self.onBackgroundLayerPersistenceCheckbox)
self.showScalingRulerCheckBox.connect('clicked()', self.onShowScalingRulerCheckbox)
self.showColorScalarBarCheckBox.connect('clicked()', self.onShowColorScalarBarCheckbox)
self.backgroundRadioButton.connect('clicked()',self.onLayerSelectionRadioButton)
self.foregroundRadioButton.connect('clicked()',self.onLayerSelectionRadioButton)
self.colorScalarBarMaxWidthSlider.connect('valueChanged(double)', self.updateSliceViewFromGUI)
restorDefaultsButton.connect('clicked()', self.restoreDefaultValues)