def r_start():
global rlib
if (rlib != None):
return rlib
os.environ["R_HOME"] = _get_rhome()
rlib = _open_rlib()
if (_main_loop_started()):
return rlib
import atexit
atexit.register(r_end, 0)
options = ("pins", "--quiet", "--vanilla", "--no-save")
options_raw = [ffi.new("char[]", o.encode("ASCII")) for o in options]
status = rlib.Rf_initialize_R(ffi.cast("int", len(options_raw)),
options_raw)
rlib.ptr_R_WriteConsoleEx = _console_write
rlib.ptr_R_WriteConsole = ffi.NULL
rlib.ptr_R_CleanUp = _cleanup
rlib.ptr_R_ProcessEvents = _processevents
rlib.ptr_R_Busy = _busy
rlib.setup_Rmainloop()
return rlib
def r_eval(code, environment=None):
r_start()
cmdSexp = rlib.Rf_allocVector(rlib.STRSXP, 1)
rlib.Rf_protect(cmdSexp)
ffi_code = ffi.new("char[]", code.encode("ASCII"))
rlib.SET_STRING_ELT(cmdSexp, 0, rlib.Rf_mkChar(ffi_code))
status = ffi.new("ParseStatus *")
cmdexpr = rlib.Rf_protect(
rlib.R_ParseVector(cmdSexp, -1, status, rlib.R_NilValue))
rlib.Rf_unprotect(2)
if status[0] != rlib.PARSE_OK:
raise RuntimeError("Failed to parse: " + code)
if environment == None:
environment = rlib.R_GlobalEnv
error = ffi.new("int *")
result = rlib.Rf_protect(
rlib.R_tryEval(rlib.VECTOR_ELT(cmdexpr, 0), environment, error))
if (error[0]):
message = r_eval("gsub('\\\n', '', geterrmessage())")
raise RuntimeError(message + " at " + code)
rtype = result.sxpinfo.type
if (rtype == rlib.CHARSXP):
result = ffi.string(rlib.R_CHAR(result)).decode("utf-8")
elif (rtype == rlib.STRSXP):
result = ffi.string(rlib.R_CHAR(rlib.STRING_ELT(result,
0))).decode("utf-8")
elif (rtype == rlib.RAWSXP):
n = rlib.Rf_xlength(result)
result = ffi.buffer(rlib.RAW(result), n)
rlib.Rf_unprotect(1)
return result