def test_from_string(self):
"""Test construction from string."""
cli = CliParameters.from_string(self.test_parameters_string)
self.compare_dictionaries(cli.parameters,
self.test_parameters_dict,
exclude_keys=['fix-syntax-errors'])
string = '--print-datablocks'
cli = CliParameters.from_string(string)
self.compare_dictionaries(cli.parameters, {'print-datablocks': True})
def launch_calculation(code, cif, parameters, daemon, dry_run):
"""Run any cod-tools calculation for the given ``CifData`` node.
The ``-p/--parameters`` option takes a single string with any command line parameters that you want to be passed
to the calculation, and by extension the cod-tools script. Example::
aiida-codtools calculation launch cod-tools -X cif-filter -N 95 -p '--use-c-parser --authors "Jane Doe"'
The parameters will be parsed into a dictionary and passed as the ``parameters`` input node to the calculation.
"""
from aiida import orm
from aiida.plugins import factories
from aiida_codtools.cli.utils.parameters import CliParameters
from aiida_codtools.common.resources import get_default_options
parameters = CliParameters.from_string(parameters).get_dictionary()
inputs = {
'cif': cif,
'code': code,
'metadata': {
'options': get_default_options(),
'dry_run': dry_run,
'store_provenance': not dry_run
}
}
if parameters:
inputs['parameters'] = orm.Dict(dict=parameters)
launch.launch_process(factories.CalculationFactory(code.get_attribute('input_plugin')), daemon, **inputs)