def test_all_domains_classified(self):
domain_names = []
with open(path.get_full_path(nrps_pks_domains.__file__, "data", "nrpspksdomains.hmm")) as handle:
for line in handle:
if line.startswith("NAME"):
domain_names.append(line.strip().split()[1])
missing = [name for name in domain_names if not classify(name)]
assert not missing, missing
def test_unclassifiable(self):
with self.assertRaisesRegex(ValueError, "could not classify"):
classify("bad-domain-name")
def test_existing(self):
assert CLASSIFICATIONS
for classification, group in CLASSIFICATIONS.items():
for label in group:
assert classify(label) == classification