def insertMaxLikeJob(self):
maxjobq = appiondata.ApMaxLikeJobData()
maxjobq['runname'] = self.params['runname']
maxjobq['path'] = appiondata.ApPathData(
path=os.path.abspath(self.params['rundir']))
maxjobdatas = maxjobq.query(results=1)
if maxjobdatas:
alignrunq = appiondata.ApAlignRunData()
alignrunq['runname'] = self.params['runname']
alignrunq['path'] = appiondata.ApPathData(
path=os.path.abspath(self.params['rundir']))
alignrundata = alignrunq.query(results=1)
if maxjobdatas[0]['finished'] is True or alignrundata:
apDisplay.printError(
"This run name already exists as finished in the database, please change the runname"
)
maxjobq[
'REF|projectdata|projects|project'] = apProject.getProjectIdFromStackId(
self.params['stackid'])
maxjobq['timestamp'] = self.timestamp
maxjobq['finished'] = False
maxjobq['hidden'] = False
if self.params['commit'] is True:
maxjobq.insert()
self.params['maxlikejobid'] = maxjobq.dbid
print "self.params['maxlikejobid']", self.params['maxlikejobid']
return
def getMaxLikeJob(self, runparams): maxjobq = appiondata.ApMaxLikeJobData() maxjobq['runname'] = runparams['runname'] maxjobq['path'] = appiondata.ApPathData(path=os.path.abspath(runparams['rundir'])) maxjobq['REF|projectdata|projects|project'] = apProject.getProjectIdFromStackId(runparams['stackid']) maxjobq['timestamp'] = self.params['timestamp'] maxjobdata = maxjobq.query(results=1) if not maxjobdata: return None return maxjobdata[0]
def getMaxlikeJobDataForUpload(alignrunname):
maxjobq = appiondata.ApMaxLikeJobData()
maxjobq['runname'] = alignrunname
maxjobq['finished'] = True
maxjobq['hidden'] = False
maxjobdatas = maxjobq.query()
freejobs = []
for maxjobdata in maxjobdatas:
if not _isMaxLikeJobUploaded(maxjobdata):
freejobs.append(maxjobdata)
if len(freejobs) == 0:
return None
elif len(freejobs) > 1:
apDisplay.printError("Found too many align runs for specified criteria")
return freejobs[0]