def monitor(monitor_config: AMLTensorBoardMonitorConfig,
azure_config: AzureConfig) -> None:
"""
Starts TensorBoard monitoring as per the provided arguments.
:param monitor_config: The config containing information on which runs that need be monitored.
:param azure_config: An AzureConfig object with secrets/keys to access the workspace.
"""
# Fetch AzureML workspace and the experiment runs in it
workspace = azure_config.get_workspace()
if monitor_config.run_ids is not None:
if len(monitor_config.run_ids) == 0:
print("At least one run_recovery_id must be given for monitoring.")
sys.exit(1)
exp_runs = [
azure_util.fetch_run(workspace, run_id)
for run_id in monitor_config.run_ids
]
else:
if monitor_config.experiment_name not in workspace.experiments:
print(f"The experiment: {monitor_config.experiment_name} doesn't "
f"exist in the {monitor_config.workspace_name} workspace.")
sys.exit(1)
experiment = Experiment(workspace, monitor_config.experiment_name)
filters = common_util.get_items_from_string(
monitor_config.run_status) if monitor_config.run_status else []
exp_runs = azure_util.fetch_runs(experiment, filters)
if len(exp_runs) == 0:
_msg = "No runs to monitor"
if monitor_config.run_status:
_msg += f"with status [{monitor_config.run_status}]."
print(_msg)
sys.exit(1)
# Start TensorBoard on executing machine
ts = Tensorboard(exp_runs,
local_root=str(monitor_config.local_root),
port=monitor_config.port)
print(
"=============================================================================="
)
for run in exp_runs:
print(f"Run URL: {run.get_portal_url()}")
print("TensorBoard URL: ")
ts.start()
print(
"==============================================================================\n\n"
)
input("Press Enter to close TensorBoard...")
ts.stop()
def monitor_run_tensorboard(
run=None,
local_directory=None,
# We enforce a logger
logger=None):
try:
from azureml.tensorboard import Tensorboard
except ImportError as e:
logger.debug("tensorboard import exception: {}".format(e))
raise ImportError("Couldn't import the tensorboard functionality. "
"Please ensure 'azureml-tensorboard' is installed")
local_root = os.path.abspath(local_directory)
logger.debug("Staging tensorboard files in %s", local_root)
tb = Tensorboard(run, local_root=local_root)
tb.start(start_browser=True)
tb._tb_proc.communicate() # don't use wait() to avoid deadlock
return None
class Train():
def __init__(self):
self._parser = argparse.ArgumentParser("train")
self._parser.add_argument(
"--release_id",
type=str,
help="The ID of the release triggering this pipeline run")
self._parser.add_argument("--model_name",
type=str,
help="Name of the tf model")
self._parser.add_argument("--ckpt_path",
type=str,
help="Chekpoint path",
default="checkpoint/yolov3.ckpt")
self._parser.add_argument("--datastore",
type=str,
help="Name of the datastore",
default="epis_datastore")
self._parser.add_argument("--storage_container",
type=str,
help="Name of the storage container",
default="ppe")
self._args = self._parser.parse_args()
self._run = Run.get_context()
self._exp = self._run.experiment
self._ws = self._run.experiment.workspace
self._tb = Tensorboard([self._run])
self._datastore = Datastore.get(self._ws,
datastore_name=self._args.datastore)
def __get_mime_type(self, file_path):
return mime_content_type(file_path)
def training(self):
self.__getDataset()
trainset = Dataset('train')
logdir = "./data/log"
steps_per_epoch = len(trainset)
global_steps = tf.Variable(1, trainable=False, dtype=tf.int64)
warmup_steps = cfg.TRAIN.WARMUP_EPOCHS * steps_per_epoch
total_steps = cfg.TRAIN.EPOCHS * steps_per_epoch
input_tensor = tf.keras.layers.Input([416, 416, 3])
conv_tensors = YOLOv3(input_tensor)
output_tensors = []
for i, conv_tensor in enumerate(conv_tensors):
pred_tensor = decode(conv_tensor, i)
output_tensors.append(conv_tensor)
output_tensors.append(pred_tensor)
model = tf.keras.Model(input_tensor, output_tensors)
optimizer = tf.keras.optimizers.Adam()
if os.path.exists(logdir): shutil.rmtree(logdir)
writer = tf.summary.create_file_writer(logdir)
self._tb.start()
for epoch in range(cfg.TRAIN.EPOCHS):
print(epoch)
for image_data, target in trainset:
self.__train_step(image_data, target, model, global_steps,
writer, optimizer, warmup_steps, total_steps)
model.save_weights(self._args.ckpt_path)
self._tb.stop()
model.save(f"./models")
zipFolder("check.zip", "checkpoint")
zipFolder("log.zip", "data/log")
zipFolder("model.zip", "models")
self._run.upload_file(name='check.zip', path_or_stream="check.zip")
print(
f"Uploaded the checkpoints to experiment {self._run.experiment.name}"
)
self._run.upload_file(name='log.zip', path_or_stream="log.zip")
print(f"Uploaded the tfruns to experiment {self._run.experiment.name}")
self._run.upload_file(name='model.zip', path_or_stream="model.zip")
print(f"Uploaded the model to experiment {self._run.experiment.name}")
print("Following files are uploaded")
print(self._run.get_file_names())
self._run.add_properties({
"release_id": self._args.release_id,
"run_type": "train"
})
print(f"added properties: {self._run.properties}")
self._run.complete()
def __getDataset(self):
voc_train = self._datastore.blob_service.list_blobs(
self._args.storage_container, prefix='voc_train.txt')
voc_test = self._datastore.blob_service.list_blobs(
self._args.storage_container, prefix='voc_test.txt')
voc_train_imagesets = list(voc_train)
print("Succesfully get voc_train.txt")
voc_test_imagesets = list(voc_test)
print("Succesfully get voc_test.txt")
self._datastore.blob_service.get_blob_to_path(
self._args.storage_container, voc_train_imagesets[0].name,
f'./data/dataset/{voc_train_imagesets[0].name}')
self._datastore.blob_service.get_blob_to_path(
self._args.storage_container, voc_test_imagesets[0].name,
f'./data/dataset/{voc_test_imagesets[0].name}')
def __train_step(self, image_data, target, model, global_steps, writer,
optimizer, warmup_steps, total_steps):
with tf.GradientTape() as tape:
pred_result = model(image_data, training=True)
giou_loss = conf_loss = prob_loss = 0
for i in range(3):
conv, pred = pred_result[i * 2], pred_result[i * 2 + 1]
loss_items = compute_loss(pred, conv, *target[i], i)
giou_loss += loss_items[0]
conf_loss += loss_items[1]
prob_loss += loss_items[2]
total_loss = giou_loss + conf_loss + prob_loss
gradients = tape.gradient(total_loss, model.trainable_variables)
optimizer.apply_gradients(zip(gradients,
model.trainable_variables))
tf.print(
"=> STEP %4d lr: %.6f giou_loss: %4.2f conf_loss: %4.2f "
"prob_loss: %4.2f total_loss: %4.2f" %
(global_steps, optimizer.lr.numpy(), giou_loss, conf_loss,
prob_loss, total_loss))
global_steps.assign_add(1)
if global_steps < warmup_steps:
lr = global_steps / warmup_steps * cfg.TRAIN.LR_INIT
else:
lr = cfg.TRAIN.LR_END + 0.5 * (
cfg.TRAIN.LR_INIT - cfg.TRAIN.LR_END) * ((1 + tf.cos(
(global_steps - warmup_steps) /
(total_steps - warmup_steps) * np.pi)))
optimizer.lr.assign(lr.numpy())
with writer.as_default():
tf.summary.scalar("lr", optimizer.lr, step=global_steps)
tf.summary.scalar("loss/total_loss",
total_loss,
step=global_steps)
tf.summary.scalar("loss/giou_loss",
giou_loss,
step=global_steps)
tf.summary.scalar("loss/conf_loss",
conf_loss,
step=global_steps)
tf.summary.scalar("loss/prob_loss",
prob_loss,
step=global_steps)
writer.flush()
nargs='+',
default=None,
help='runids to create')
return parser.parse_args()
args = parse_args()
print(args)
if args.runids:
# get workspace
ws = Workspace.from_config()
# set the expiriment
experiment_name = 'test'
exp = Experiment(workspace=ws, name=experiment_name)
runs = []
for idx in args.runids:
run = Run(exp, idx)
runs.append(run)
tb = Tensorboard(runs)
tb.start()
## Wait for input to stop tensorboard.
print('Enter to stop tensorboard')
input()
tb.stop()
def main():
"""
Run the experiment for training
"""
work_space = Workspace.from_config()
# Set up the dataset for training
datastore = work_space.get_default_datastore()
dataset = Dataset.File.from_files(path=(datastore, "datasets/mnist"))
# Set up the experiment for training
experiment = Experiment(workspace=work_space, name="keras-lenet-train")
# azureml._restclient.snapshots_client.SNAPSHOT_MAX_SIZE_BYTES = 2000000000
config = ScriptRunConfig(
source_directory=".",
script="train_keras.py",
compute_target="cpu-cluster",
arguments=[
"--data_folder",
dataset.as_named_input("input").as_mount(),
],
)
# Set up the Tensoflow/Keras environment
environment = Environment("keras-environment")
environment.python.conda_dependencies = CondaDependencies.create(
python_version="3.7.7",
pip_packages=["azureml-defaults", "numpy", "tensorflow==2.3.1"])
config.run_config.environment = environment
# Run the experiment for training
run = experiment.submit(config)
aml_url = run.get_portal_url()
print(
"Submitted to an Azure Machine Learning compute cluster. Click on the link below"
)
print("")
print(aml_url)
tboard = Tensorboard([run])
# If successful, start() returns a string with the URI of the instance.
tboard.start(start_browser=True)
run.wait_for_completion(show_output=True)
# After your job completes, be sure to stop() the streaming otherwise it will continue to run.
print("Press enter to stop")
input()
tboard.stop()
# Register Model
metrics = run.get_metrics()
run.register_model(
model_name="keras_mnist",
tags={
"data": "mnist",
"model": "classification"
},
model_path="outputs/keras_lenet.h5",
model_framework=Model.Framework.TENSORFLOW,
model_framework_version="2.3.1",
properties={
"train_loss": metrics["train_loss"][-1],
"train_accuracy": metrics["train_accuracy"][-1],
"val_loss": metrics["val_loss"][-1],
"val_accuracy": metrics["val_accuracy"][-1],
},
)
def tensorboard():
args = parse_args()
tb = Tensorboard([args.run])
# If successful, start() returns a string with the URI of the instance.
tb.start()
from azure.common.client_factory import get_client_from_cli_profile
from azure.mgmt.resource import SubscriptionClient
from azureml.core import Experiment
from azureml.core import Workspace
from azureml.core.authentication import AzureCliAuthentication
from azureml.tensorboard import Tensorboard
cli_auth = AzureCliAuthentication()
subscription_client = get_client_from_cli_profile(SubscriptionClient)
subscription_id = next(
subscription_client.subscriptions.list()).subscription_id
ws = Workspace(
subscription_id=subscription_id,
resource_group="ds_envs_RG",
workspace_name="ds_envs_ws",
auth=cli_auth,
)
experiment_name = "my_experiment"
run_id = "my_experiment_1603471452_ed6739ca"
experiment = Experiment(workspace=ws, name=experiment_name)
run = [i for i in experiment.get_runs() if i.id == run_id][0]
tb = Tensorboard([run])
tb.start(start_browser=True)
input("Press Enter to continue...")
tb.stop()