def test_iterwrite_io():
collection = _get_collection()
f = io.BytesIO()
with biocxml.iterwrite(f) as writer:
writer.write_collection_info(collection)
for document in collection.documents:
writer.write_document(document)
collection = biocxml.loads(f.getvalue().decode('utf-8'))
assert_everything(collection)
def test_loads():
with open(file, encoding='utf8') as fp:
s = fp.read()
collection = biocxml.loads(s)
assert_everything(collection)
def test_file_type():
with pytest.raises(ValueError):
biocxml.load(open(file, encoding='utf8'), None)
with pytest.raises(ValueError):
biocxml.loads('', None)
def test_dumps():
collection = _get_collection()
s = biocxml.dumps(collection)
collection = biocxml.loads(s)
assert_everything(collection)
def test_dumps():
collection = _get_collection()
s = biocxml.dumps(collection, version=bioc.BioCVersion.V2)
collection = biocxml.loads(s, version=bioc.BioCVersion.V2)
assert_everything(collection)