Exemple #1
0
    def get_default_df(cls, usecache=True):
        cp = ConfigParser()
        cp.read(os.path.expanduser('~/git/cafa4/etc/cafa4.conf'))
        upg = UniProt(cp)
        df = upg.get_swissprot_df(usecache=usecache)

        return df
Exemple #2
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def test_swissprot(config):
    logging.debug("Running test_swissprot")
    upg = UniProt(config)
    out = upg.get_swissprot_df()
    print(str(out))
Exemple #3
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def test_datparse(config):
    upg = UniProt(config)
    df = upg.get_swissprot_df()
    return df