def test_list_all_endpoints(self):
metadata = biothings_explorer_test.MetaData()
self.assertIn("http://MyChem.info/v1/drug/{drugid}",
metadata.list_all_endpoints())
self.assertIn(
"https://pharos.nih.gov/idg/api/v1/diseases({diseaseid})",
metadata.list_all_endpoints())
def test_list_all_api_resources(self):
metadata = biothings_explorer_test.MetaData()
self.assertIn('MyGene.info API', metadata.list_all_api_resources())
self.assertIn('Pharos API', metadata.list_all_api_resources())
def test_list_all_predicates(self):
metadata = biothings_explorer_test.MetaData()
self.assertIn("DiseaseOntologyToParentDiseaseOntologyAssociation",
metadata.list_all_predicates())
self.assertIn("EquivalentAssociation", metadata.list_all_predicates())
def test_list_all_semantic_types(self):
metadata = biothings_explorer_test.MetaData()
self.assertIn("gene", metadata.list_all_semantic_types())
self.assertIn("pathway", metadata.list_all_semantic_types())
def test_list_all_prefixes(self):
metadata = biothings_explorer_test.MetaData()
self.assertIn("gene", metadata.list_all_prefixes())
self.assertIn("ncbigene", metadata.list_all_prefixes()['gene'])
self.assertIn("uniprot",
metadata.list_all_prefixes(group_by_semantic_type=False))