def __init__(self,
in_label='Taxon',
out_label='EOLData',
connect_labels=('MENTIONED_IN_DATA', 'MENTIONS_SPECIES'),
name='EOL'):
Module.__init__(self, in_label, out_label, connect_labels, name)
self.api = EOL_API()
def __init__(self,
in_label=None,
out_label='Species',
connect_label=None,
name='Testing',
count=1):
Module.__init__(self, in_label, out_label, connect_label, name, count)
def __init__(self,
in_label=None,
out_label='Species:Taxon',
connect_label=None,
name='NormalCatalog',
count=2700000):
Module.__init__(self, in_label, out_label, connect_label, name, count)
def __init__(self,
in_label='TestOutput',
out_label='DependentTestOutput',
connect_label=None,
name='DependentTester',
count=1):
Module.__init__(self, in_label, out_label, connect_label, name, count)
def __init__(self,
import_dir=NEO4J_IMPORT_DIR,
in_label=None,
out_label='DirectorParserFinishedSignal',
connect_label=None,
name='Directory Parser'):
Module.__init__(self, in_label, out_label, connect_label, name)
self.import_dir = import_dir
def __init__(self,
import_dir=IMPORT,
in_label=None,
out_label='CatalogFinishedSignal',
connect_label=None,
name='OptimizedCatalog'):
Module.__init__(self, in_label, out_label, connect_label, name)
self.import_dir = import_dir
def __init__(self, count=100):
'''
:param count: Number of augmentations to do
'''
Module.__init__(self,
in_label='CleanAirfoilPlot',
out_label='AugmentedAirfoilPlot',
connect_labels=('augmented_image', 'augmented_image'))
self.count = count
def __init__(self,
in_label='Taxon',
out_label='WikipediaArticle:Article',
connect_labels=('MENTIONED_IN_ARTICLE', 'MENTIONS_SPECIES'),
name='Wikipedia'):
Module.__init__(self, in_label, out_label, connect_labels, name)
self.SCRAPE_FIELDS = {
'content', 'summary', 'links', 'references', 'images', 'title',
'url'
}
def __init__(self,
in_label=None,
out_label='MLData',
connect_labels=None,
name='MockMLData'):
Module.__init__(self,
in_label=in_label,
out_label=out_label,
connect_labels=connect_labels,
name=name)
def __init__(self,
in_label=None,
out_label='EOLPage',
connect_labels=None,
name='EOLSpecies'):
Module.__init__(self,
in_label,
out_label,
connect_labels,
name,
page_batches=False)
def __init__(self,
in_label='Article',
out_label='HitList',
connect_labels=('hitlist', 'hitlist'),
name='ArticleIndexer'):
Module.__init__(self,
in_label,
out_label,
connect_labels,
name,
page_batches=True)
self.SECTIONS = {'title', 'abstract', 'content'}
self.cleaner = Cleaner()
def __init__(self,
in_label='MLData',
out_label=None,
connect_labels=None,
name='MockMLData',
epochs=2,
train_fraction=0.8,
test_fraction=0.15,
validate_fraction=0.05):
Module.__init__(self,
in_label=in_label,
out_label=out_label,
connect_labels=connect_labels,
name=name,
page_batches=True)
self.epochs = epochs
self.validate_fraction = validate_fraction
self.train_fraction = train_fraction
self.test_fraction = test_fraction
def __init__(self,
in_label=None,
out_label='WikipediaPage',
connect_label=None,
name='DownloadedWikipedia'):
Module.__init__(self, in_label, out_label, connect_label, name)
def __init__(self, in_label='CatalogFinishedSignal', out_label='EOLPage', connect_labels=('eol_page', 'eol_page'), name='EOLSpecies'):
Module.__init__(self, in_label, out_label, connect_labels, name, False)
def __init__(self, in_label='Taxon', out_label='JEBArticle:Article', connect_labels=('MENTIONED_IN_ARTICLE', 'MENTIONS_SPECIES'), name='JEB'):
Module.__init__(self, in_label, out_label, connect_labels, name)
self.JEB_LIMIT = 50
def __init__(self, in_label='HitList', out_label=None, connect_labels=None, name='InvertedIndexCreator'):
Module.__init__(self, in_label, out_label, connect_labels, name, page_batches=True)
self.index = defaultdict(list)
self.lexicon = set()
def __init__(self, in_label='Taxon', out_label='GoogleArticle:Article', connect_labels=('MENTIONED_IN_ARTICLE', 'MENTIONS_SPECIES'), name='GoogleScholar'):
Module.__init__(self, in_label, out_label, connect_labels, name)
def __init__(self,
in_label=None,
out_label='HighwireArticle:Article',
connect_label=None,
name='Highwire'):
Module.__init__(self, in_label, out_label, connect_label, name)
def __init__(self,
in_label=None,
out_label='AirfoilURL',
connect_labels=None,
name='AirfoilList'):
Module.__init__(self, in_label, out_label, connect_labels, name)
def __init__(self,
in_label=None,
out_label=None,
connect_labels=None,
name='AbstractImageModule'):
Module.__init__(self, in_label, out_label, connect_labels, name)
def __init__(self, name='AirfoilPlotter'):
Module.__init__(self,
in_label='Airfoil',
out_label='CleanAirfoilPlot',
connect_labels=('image', 'image'),
name=name)