def test_serialize():
"""ephys.locations: Test serialize functionality"""
from bluepyopt.ephys.locations import (
NrnSeclistCompLocation,
NrnSeclistLocation,
NrnSeclistSecLocation,
NrnSomaDistanceCompLocation)
seclist_name, sec_index, comp_x, soma_distance = 'somatic', 0, 0.5, 800
locations = (
NrnSeclistCompLocation('NrnSeclistCompLocation',
seclist_name, sec_index, comp_x),
NrnSeclistLocation(
'NrnSeclistLocation', seclist_name),
NrnSeclistSecLocation(
'NrnSeclistSecLocation', seclist_name, sec_index),
NrnSomaDistanceCompLocation(
'NrnSomaDistanceCompLocation', soma_distance, seclist_name),)
for loc in locations:
serialized = loc.to_dict()
assert isinstance(json.dumps(serialized), str)
deserialized = instantiator(serialized)
assert isinstance(deserialized, loc.__class__)
assert deserialized.seclist_name == seclist_name
assert deserialized.name == loc.__class__.__name__
def test_serialize():
"""ephys.locations: Test serialize functionality"""
from bluepyopt.ephys.locations import (
NrnSeclistCompLocation,
NrnSeclistLocation,
NrnSeclistSecLocation,
NrnSomaDistanceCompLocation,
)
seclist_name, sec_index, comp_x, soma_distance = "somatic", 0, 0.5, 800
locations = (
NrnSeclistCompLocation("NrnSeclistCompLocation", seclist_name,
sec_index, comp_x),
NrnSeclistLocation("NrnSeclistLocation", seclist_name),
NrnSeclistSecLocation("NrnSeclistSecLocation", seclist_name,
sec_index),
NrnSomaDistanceCompLocation("NrnSomaDistanceCompLocation",
soma_distance, seclist_name),
)
for loc in locations:
serialized = loc.to_dict()
nt.ok_(isinstance(json.dumps(serialized), str))
deserialized = instantiator(serialized)
nt.ok_(isinstance(deserialized, loc.__class__))
nt.eq_(deserialized.seclist_name, seclist_name)
nt.eq_(deserialized.name, loc.__class__.__name__)