def main_app2():
args = get_gen_proc_arg_parser().parse_args()
try:
uri = _get_uri(args)
# blueprints = _build_blueprints(uri)
# gen_proc(args, blueprints)
obs = stuff(args)
mc.write_obs_to_file(obs, './stuff.xml')
except Exception as e:
logging.error('Failed {} execution for {} with {}.'.format(
APPLICATION, args, e))
tb = traceback.format_exc()
logging.error(tb)
sys.exit(-1)
logging.debug('Done {} processing.'.format(APPLICATION))
# bash-5.0# /usr/local/hdf5/bin/h5dump 20190805T024026_f060_s00001.h5 | grep DATASET
# DATASET "catalog" {
# DATASET "header" {
# DATASET "image" {
# DATASET "imager" {
# DATASET "moment" {
# DATASET "a" {
# DATASET "ap" {
# DATASET "b" {
# DATASET "bp" {
# DATASET "cdmatrix" {
# DATASET "order" {
# DATASET "window" {
# bash-5.0# ls^C
def _write_obs_mock():
args = get_gen_proc_arg_parser().parse_args()
obs = SimpleObservation(
collection=args.observation[0],
observation_id=args.observation[1],
algorithm=Algorithm(name='exposure'),
)
mc.write_obs_to_file(obs, args.out_obs_xml)
def to_caom2():
"""This function is called by pipeline execution. It must have this name.
"""
args = get_gen_proc_arg_parser().parse_args()
uris = _get_uris(args)
blueprints = _build_blueprints(uris)
result = gen_proc(args, blueprints)
logging.debug(f'Done {APPLICATION} processing.')
return result
def blank_main_app():
args = get_gen_proc_arg_parser().parse_args()
try:
result = to_caom2()
sys.exit(result)
except Exception as e:
logging.error(f'Failed {APPLICATION} execution for {args}.')
tb = traceback.format_exc()
logging.debug(tb)
sys.exit(-1)
def neossat_main_app():
args = get_gen_proc_arg_parser().parse_args()
try:
result = to_caom2()
sys.exit(result)
except Exception as e:
logging.error('Failed {} execution for {}.'.format(APPLICATION, args))
tb = traceback.format_exc()
logging.debug(tb)
sys.exit(-1)
def to_caom2():
"""This function is called by pipeline execution. It must have this name.
"""
args = get_gen_proc_arg_parser().parse_args()
# uris = _get_uris(args)
# blueprints = _build_blueprints(uris)
# result = gen_proc(args, blueprints)
obs = build_from_hdf5(args)
mc.write_obs_to_file(obs, f'./{obs.observation_id}.actual.xml')
logging.debug(f'Done {APPLICATION} processing.')
return 1
def vlite_main_app():
args = get_gen_proc_arg_parser().parse_args()
try:
uris = _get_uris(args)
blueprints = _build_blueprints(uris)
gen_proc(args, blueprints)
except Exception as e:
logging.error('Failed {} execution for {}.'.format(APPLICATION, args))
tb = traceback.format_exc()
logging.debug(tb)
sys.exit(-1)
logging.debug('Done {} processing.'.format(APPLICATION))
def test_visit_generic_parser():
try:
sys.argv = [
'fits2caom2', '--local', 'fname', '--observation',
'test_collection_id', 'test_observation_id'
]
test_parser = GenericParser()
test_plugin = __name__
test_args = get_gen_proc_arg_parser().parse_args()
kwargs = {}
_visit(test_plugin, test_args, test_parser, **kwargs)
except BaseException as e:
assert False, 'should not get here {}'.format(e)
def main_app():
args = get_gen_proc_arg_parser().parse_args()
try:
vlass = VlassCardinality()
blueprints = vlass.build_blueprints(args)
gen_proc(args, blueprints)
except Exception as e:
logging.error('Failed {} execution.'.format(APPLICATION))
logging.error(e)
tb = traceback.format_exc()
logging.error(tb)
sys.exit(-1)
logging.debug('Done {} processing.'.format(APPLICATION))
def to_caom2():
parser = get_gen_proc_arg_parser()
args = parser.parse_args()
# set the arguments for those files that, despite being fits files,
# are processed with a generic parser - do this because fits2caom2
# manages parser creation based on file names, mostly
#
uris, generic_uris = _filter_args(args)
blueprints = _build_blueprints(uris)
if len(generic_uris) > 0:
sys.argv.append('--use_generic_parser')
for ii in generic_uris:
sys.argv.append(ii)
args = parser.parse_args()
result = gen_proc(args, blueprints)
logging.debug(f'Done {APPLICATION} processing.')
return result
def to_caom2():
args = get_gen_proc_arg_parser().parse_args()
vlass = VlassCardinality()
blueprints = vlass.build_blueprints(args)
return gen_proc(args, blueprints)
def to_caom2():
args = get_gen_proc_arg_parser().parse_args()
uris = _get_uris(args)
blueprints = _build_blueprints(uris)
return gen_proc(args, blueprints)
def to_caom2():
args = get_gen_proc_arg_parser().parse_args()
result = _build_observation(args)
logging.debug(f'Done {APPLICATION} processing.')
return result
