def __call__(self, annotion_list, back_word_list, p):
"""
Calculate the annotion and back word value
:param annotion_list:
:param back_word_list:
:param p: hidden value
:return:
"""
batch_size = p.data.shape[0]
exponential_list = []
sum_exponential = XP.fzeros((batch_size, 1))
# Calculate the total value list and total value
# Prepare the Convoluation
for annotion, back_word in zip(annotion_list, back_word_list):
weight = functions.tanh(self.annotion_weight(annotion) + self.back_weight(back_word) + self.pw(p))
exponential = functions.exp(self.weight_exponential(weight))
exponential_list.append(exponential)
sum_exponential += exponential
ZEROS = XP.fzeros((batch_size, self.hidden_size))
annotion_value = ZEROS
back_word_value = ZEROS
# Calculate the Convolution Value each annotion and back word
for annotion, back_word, exponential in zip(annotion_list, back_word_list, exponential_list):
exponential /= sum_exponential
annotion_value += functions.reshape(functions.batch_matmul(annotion, exponential), (batch_size, self.hidden_size))
back_word_value += functions.reshape(functions.batch_matmul(back_word, exponential), (batch_size, self.hidden_size))
return annotion_value, back_word_value
def step(self, x, rnn_states, encoder_states, train):
new_states = []
h_in = self.word_emb(x)
for i, (rnn, state) in enumerate(zip(self.rnns, rnn_states)):
if self.gru:
h = state
state = rnn(h, h_in)
h_in = state
else:
c, h = state
state = rnn(c, h, h_in)
_, h_in = state
new_states.append(state)
if i < len(self.rnns) - 1:
if self.dropout_ratio > 0:
h_in = F.dropout(h_in, self.dropout_ratio, train)
batch_size, input_length, hidden_dim = encoder_states.data.shape
h_in_linear = self.phi1_linear(h_in) # (batch_size, hidden_dim)
h_in_linear_tanh = F.tanh(h_in_linear) # (batch_size, hidden_dim)
unnormalized_weights = F.reshape(F.batch_matmul(encoder_states, h_in_linear_tanh), (batch_size, input_length)) # (batch, input_length)
normalized_weights = F.softmax(unnormalized_weights) # (batch, input_length)
encoder_context = F.reshape(F.batch_matmul(encoder_states, normalized_weights, transa=True), (batch_size, hidden_dim)) # (batch, hidden_dim)
encoder_context_h_in = F.concat([encoder_context, h_in], axis=1) # (batch, hidden_dim * 2)
y = self.softmax_linear(F.relu(encoder_context_h_in)) # Is ReLU here really necessary?
return y, normalized_weights, new_states
def __call__(self, fs, bs, h): ''' Attentionの計算 :param fs: 順向きのEncoderの中間ベクトルが記録されたリスト :param bs: 逆向きのEncoderの中間ベクトルが記録されたリスト :param h: Decoderで出力された中間ベクトル :return: 順向きのEncoderの中間ベクトルの加重平均と逆向きのEncoderの中間ベクトルの加重平均 ''' batch_size = h.data.shape[0] # ミニバッチのサイズを記憶 ws = [] # ウェイトを記録するためのリストの初期化 sum_w = Variable(xp.zeros((batch_size, 1), dtype='float32')) # ウェイトの合計値を計算するための値を初期化 # Encoderの中間ベクトルとDecoderの中間ベクトルを使ってウェイトの計算 for f, b in zip(fs, bs): w = F.tanh(self.fh(f)+self.bh(b)+self.hh(h)) # 順向きEncoderの中間ベクトル、逆向きEncoderの中間ベクトル、Decoderの中間ベクトルを使ってウェイトの計算 w = F.exp(self.hw(w)) # softmax関数を使って正規化する ws.append(w) # 計算したウェイトを記録 sum_w += w # 出力する加重平均ベクトルの初期化 att_f = Variable(xp.zeros((batch_size, self.hidden_size), dtype='float32')) att_b = Variable(xp.zeros((batch_size, self.hidden_size), dtype='float32')) for f, b, w in zip(fs, bs, ws): w /= sum_w # ウェイトの和が1になるように正規化 # ウェイト * Encoderの中間ベクトルを出力するベクトルに足していく att_f += F.reshape(F.batch_matmul(f, w), (batch_size, self.hidden_size)) att_b += F.reshape(F.batch_matmul(b, w), (batch_size, self.hidden_size)) return att_f, att_b
def _attn(self, q, k, v):
w = F.batch_matmul(q.reshape(-1, *q.shape[-2:]),
k.reshape(-1, *k.shape[-2:]))
if self.scale:
w = w / math.sqrt(v.shape[-1])
# TF implem method: mask_attn_weights
w = w * self.b.array[0] + -1e9 * (1 - self.b.array[0])
w = F.softmax(w, axis=2)
w = self.attn_dropout(w)
return F.batch_matmul(w, v.reshape(-1, *v.shape[-2:]))\
.reshape(v.shape[0], v.shape[1], v.shape[2], -1)
def __call__(self, x):
bs, ch, t, wi = x.shape
f = F.reshape(F.leaky_relu(self.c_f(x)), (-1, t, wi))
g = F.reshape(F.leaky_relu(self.c_g(x)), (-1, t, wi))
m = F.softmax(F.batch_matmul(F.transpose(f, (
0,
2,
1,
)), g), axis=1)
h = F.batch_matmul(m, F.reshape(F.leaky_relu(self.c_h(x)),
(-1, t, wi)))
h = F.reshape(h, (bs, ch, t, wi))
return h
def calculate_score(self, h, pos, neg, pos_score=None, neg_score=None, multipos=False):
#h_pro = self.act1(self.W_predict(h))
h_pro = h
if multipos:
# If multiple positive vectors are given,
# max score is picked up. (other ones are not propagated)
pos_scoreL = [F.batch_matmul(h_pro, pos_one, transa=True) for pos_one in pos]
pos_score = F.max(F.concat(pos_scoreL, axis=1), axis=1, keepdims=True)
else:
pos_score = F.batch_matmul(h_pro, pos, transa=True)
neg_score = F.batch_matmul(h_pro, neg, transa=True)
return pos_score, neg_score
def query(self, u):
xp = cuda.get_array_module(u)
size = self.m.shape[1]
inds = xp.arange(size - 1, -1, -1, dtype=numpy.int32)
tm = self.TA(inds)
tc = self.TC(inds)
tm = F.broadcast_to(tm, self.m.shape)
tc = F.broadcast_to(tc, self.c.shape)
p = F.softmax(F.batch_matmul(self.m + tm, u))
o = F.batch_matmul(F.swapaxes(self.c + tc, 2, 1), p)
o = F.squeeze(o, -1)
u = o + u
return u
def __call__(self, x):
batch, channels, height, width = x.shape
proj_query = self.query_conv(x).reshape((batch, -1, height * width))
proj_key = self.key_conv(x).reshape((batch, -1, height * width))
proj_value = self.value_conv(x).reshape((batch, -1, height * width))
energy = F.batch_matmul(proj_query, proj_key, transa=True)
w = F.softmax(energy, axis=-1)
y = F.batch_matmul(proj_value, w, transb=True)
y = y.reshape((batch, -1, height, width))
y = self.scale(y) + x
return y
def query(self, u):
xp = backend.get_array_module(u)
size = self.m.shape[1]
inds = xp.arange(size - 1, -1, -1, dtype=numpy.int32)
tm = self.TA(inds)
tc = self.TC(inds)
tm = F.broadcast_to(tm, self.m.shape)
tc = F.broadcast_to(tc, self.c.shape)
p = F.softmax(F.batch_matmul(self.m + tm, u))
o = F.batch_matmul(F.swapaxes(self.c + tc, 2, 1), p)
o = F.squeeze(o, -1)
u = o + u
return u
def evaluate(self, images, labels):
"""
Evaluate accuracy score
"""
nb_class = self.nb_class_test
images = self.xp.stack(images)
batchsize = images.shape[0]
accs = []
key = self.encoder(images, batchsize, train=False)
support_set = key[:nb_class * self.n_shot, :]
query_set = key[nb_class * self.n_shot:, :]
average_key = F.mean(F.reshape(support_set,
[self.n_shot, nb_class, -1]),
axis=0)
batchsize_q = len(query_set.data)
pow_avg = self.compute_power_avg_phi(batchsize_q,
nb_class,
average_key,
train=False)
phi_ind = [
np.int(ind) for ind in self.select_phi(average_key, pow_avg)
]
M = self.Projection_Space(average_key,
batchsize_q,
nb_class,
train=False,
phi_ind=phi_ind)
r_t = F.reshape(
F.batch_matmul(M, F.batch_matmul(M, query_set, transa=True)),
(batchsize_q, -1))
pow_t = self.compute_power(batchsize_q,
query_set,
M,
nb_class,
train=False,
phi_ind=phi_ind)
accs_tmp = self.compute_accuracy(labels[nb_class * self.n_shot:],
r_t,
pow_t,
batchsize_q,
nb_class,
phi_ind=phi_ind)
accs.append(accs_tmp)
return accs
def query(self, u):
m = self.m
c = self.c
batch, size = m.data.shape[:2]
inds = chainer.Variable(xp.arange(size, dtype=numpy.int32)[::-1])
tm = self.TA(inds)
tc = self.TC(inds)
tm = F.broadcast_to(tm, (batch,) + tm.data.shape)
tc = F.broadcast_to(tc, (batch,) + tc.data.shape)
p = F.softmax(F.batch_matmul(m + tm, u))
o = F.batch_matmul(F.swapaxes(c + tc, 2, 1), p)
o = F.reshape(o, (batch, m.data.shape[2]))
u = o + u
return u
def InvFilter(self, X_patch):
"""
[input]
X_patch : BxPxP[mono] 3BxPxP[color] matrix (Variable)
Fx : BxPxW[mono] BxPxW[color] matrix (Variable)
Fy : BxPxH[mono] BxPxH[color] matrix (Variable)
Gamma BxHxW[mono] 3BxHxW[color] (Variable)
[output]
X : BxHxW[mono] 3BxHxW[color] matrix (Variable)
"""
return F.batch_matmul(
F.batch_matmul(self.Fy, X_patch / self.Gamma, transa=True),
self.Fx)
def fwd(self, mb):
'''ネットワークの出力を計算'''
# mb (mb_size, channel_size(1), radical_sequence)
# radical_emb (mb_size, channel_size, radical_sequence, embed_dim)
radical_emb = self.embed(mb)
# cnn_output (mb_size, vecter_dim(output_channel), word_step, 1)
cnn_output = self.concat_cnn(radical_emb)[:, :, :, 0]
mb_size = cnn_output.shape[0]
vector_dim = cnn_output.shape[1]
word_step_len = cnn_output.shape[2]
# -> cnn_output (mb_size * word_step, vecter_dim) -> Highway1
cnn_output = F.swapaxes(cnn_output, 1, 2)
cnn_output = F.reshape(cnn_output, (mb_size*word_step_len, vector_dim))
hw_out = self.hw1(cnn_output)
hw_out = F.reshape(hw_out, (mb_size, word_step_len, vector_dim))
# ndarray -> list (LSTM_layer needs list-type for each data)
hw_out = [hw_out[i, :, :] for i in range(len(mb))]
# BiLSTM
hy, cy, ys = self.bi_lstm(hx=None, cx=None, xs=hw_out)
# list -> ndarray (axis=0)
h_i = F.concat([i[None, :, :] for i in ys], axis=0)
# Highway2
vector_dim = vector_dim * 2
ys = F.reshape(h_i, (mb_size*word_step_len, vector_dim))
u_i = self.hw2(ys)
u_i = F.reshape(u_i, (mb_size, word_step_len, vector_dim))
# Soft Attention
u_a = F.broadcast_to(self.u_a, (u_i.shape[0], vector_dim))
a_i = F.batch_matmul(u_i, u_a)[:, :, 0]
a_i = F.softmax(a_i)[0, :]
# h_i -> (mb_size, vector, word_step), a_i -> (mb_size, word_step)
h_i = F.swapaxes(h_i, 1, 2)
a_i = F.broadcast_to(a_i, (h_i.shape[0], a_i.shape[0]))
# バッチごとにh_iとa_iの行列積
z = F.batch_matmul(h_i, a_i)[:, :, 0]
# output
y = self.fc(z)
if self.a.bnorm_flag is True:
y = self.bnorm_last(y)
return y
def query(self, u):
m = self.m
c = self.c
batch, size = m.data.shape[:2]
inds = chainer.Variable(xp.arange(size, dtype=numpy.int32)[::-1])
tm = self.TA(inds)
tc = self.TC(inds)
tm = F.broadcast_to(tm, (batch, ) + tm.data.shape)
tc = F.broadcast_to(tc, (batch, ) + tc.data.shape)
p = F.softmax(F.batch_matmul(m + tm, u))
o = F.batch_matmul(F.swapaxes(c + tc, 2, 1), p)
o = F.reshape(o, (batch, m.data.shape[2]))
u = o + u
return u
def read(self, h):
#M_key = F.swapaxes(F.stack(self.key_buff, axis=0), axis1=0, axis2=1) # (B, M, m)
M_key = F.stack(self.key_buff, axis=1) # (B, M, m)
self.p = F.softmax(F.reshape(F.batch_matmul(M_key, h, transa=False, transb=False), (h.shape[0], M_key.shape[1]))) # (B, M)
#p = F.reshape(p, (h.shape[0], 1, M_key.shape[1])) # (B, 1, M)
#print("p", p.shape)
#M_val = F.swapaxes(F.stack(self.val_buff, axis=0), axis1=0, axis2=1) # (B, M, m)
M_val = F.stack(self.val_buff, axis=1) # (B, M, m)
#print("M_val", M_val.shape)
o = F.batch_matmul(self.p, M_val, transa=True, transb=False) # (B, 1, m)
o = F.reshape(o, (o.shape[0], o.shape[2])) # (B, m)
#print("o", o.shape)
return o, self.p
def prediction(self, x): x = Variable(x) ecfp = self.build_ecfp(x) fcfp = self.build_fcfp(x) ecfp_beta = self.ecfp_attension(ecfp) fcfp_beta = self.ecfp_attension(fcfp) ecfp_alpha = ecfp_beta / (ecfp_beta + fcfp_beta) fcfp_alpha = fcfp_beta / (ecfp_beta + fcfp_beta) attension_ecfp = F.batch_matmul(ecfp, ecfp_alpha) attension_fcfp = F.batch_matmul(fcfp, fcfp_alpha) pred = self.dnn(attension_ecfp) pred = self.dnn(attension_fcfp + attension_ecfp) return pred
def __call__(self, x):
batch, channels, height, width = x.shape
proj_query = x.reshape((batch, -1, height * width))
proj_key = x.reshape((batch, -1, height * width))
proj_value = x.reshape((batch, -1, height * width))
energy = F.batch_matmul(proj_query, proj_key, transb=True)
energy_new = F.broadcast_to(F.max(energy, axis=-1, keepdims=True),
shape=energy.shape) - energy
w = F.softmax(energy_new, axis=-1)
y = F.batch_matmul(w, proj_value)
y = y.reshape((batch, -1, height, width))
y = self.scale(y) + x
return y
def query(self, u):
xp = cuda.get_array_module(u.data)
m = self.m
c = self.c
batch, size = m.data.shape[:2]
inds = xp.arange(size - 1, -1, -1, dtype=numpy.int32)
tm = self.TA(inds)
tc = self.TC(inds)
tm = F.broadcast_to(tm, (batch,) + tm.data.shape)
tc = F.broadcast_to(tc, (batch,) + tc.data.shape)
p = F.softmax(F.batch_matmul(m + tm, u))
o = F.batch_matmul(F.swapaxes(c + tc, 2, 1), p)
o = o[:, :, 0]
u = o + u
return u
def pairwise_ranking_loss(h_cxt, h_wrd_pos, h_wrd_negs):
N = h_cxt.shape[0]
score_pos = F.batch_matmul(h_cxt, h_wrd_pos, transa=True)
score_pos = F.reshape(score_pos, (N, ))
loss = 0.0
for h_wrd_neg in h_wrd_negs:
score_neg = F.batch_matmul(h_cxt, h_wrd_pos, transa=True)
score_neg = F.reshape(score_neg, (N, ))
loss += F.sum(F.clip(1.0 + score_neg - score_pos, 0.0, 100000000.0))
loss /= (N * len(h_wrd_negs))
return loss
def cam2pixel(K, x, D=None):
"""Convert 3D points to pixel coordinates.
Args:
K (:class `~chainer.Variable` or :ref:`ndarray`):
A 2-D array of shape `(B, 3, 3)`.
Camera matrices.
x (:class `~chainer.Variable` or :ref:`ndarray`):
A 2-D array of shape `(B, 3, N)`.
3D points x, y and z.
D (:class `~chainer.Variable` or :ref:`ndarray`):
Distortion coefficients.
A 2-D array of shape `(B, K)`
K is 4 or 5 or 8. The elements corresponds to
(k1, k2, p1, p2, [k3, [k4, k5 k6]])
respectively.
Returns:
~chainer.Variable:
A 2-D array of shape `(B, 2, N)`.
Pixel coordinates u and v.
"""
B, _, N = x.shape
x = x / x[:, 2, None, :]
if D is not None:
x = to_homogenous(distort_points(D, x[:,:2,:]))
return F.batch_matmul(K, x)[:,:2]
def __call__(self, x, length):
"""
Args:
x (numpy.ndarray or cupy.ndarray): sequences of vocabulary indices in shape
(batchsize, tokens, feature size)
lengths (numpy.ndarray or cupy.ndarray):
number of tokens in each batch index
Returns:
chainer.Variable: Sentence embedding in shape (batchsize, feature size)
"""
# e: (batchsize, feature size)
e = self.embed(x)
if self.fix_embedding:
e.unchain_backward()
# y: (batchsize, feature size)
y = F.sum(e, axis=1) / length.astype(np.float32).reshape(-1, 1)
# Equivalent to e.tran(M).y -> (batchsize, tokens, 1)
d = F.batch_matmul(e, F.matmul(y, self.M))
a = masked_softmax(d, length)
# Sentence embedding z: (batchsize, feature size)
z = F.sum(F.broadcast_to(a, e.shape) * e, axis=1)
return z
def forward(self, data):
self.reset_state()
x_list = [XP.iarray([d[0]]) for d in data]
ep_list = [self.p_embed(x) for x in x_list]
ec_list = [self.c_embed(x) for x in x_list]
er_list = [self.r_embed(x) for x in x_list]
p_list = self.p_encode(ep_list)
c_list = self.c_encode(ec_list)
r_list = self.r_encode(er_list)
P = functions.reshape(
functions.concat(p_list, 0),
(1, len(data), self.hidden_size))
C = functions.reshape(
functions.concat(c_list, 0),
(1, len(data), self.hidden_size))
R = functions.concat(r_list, 0)
parent_scores = functions.reshape(
functions.batch_matmul(C, P, transb=True),
(len(data), len(data)))
root_scores = functions.reshape(
self.r_scorer(R),
(1, len(data)))
return parent_scores, root_scores
def get_matrix(y):
ch = y.data.shape[1]
wd = y.data.shape[2]
gogh_y = F.reshape(y, (y.data.shape[0], ch, wd**2))
gogh_matrix = F.batch_matmul(gogh_y, gogh_y, transb=True) / np.float32(
ch * wd**2)
return gogh_matrix
def one_step(self, x, h, adj, deg_conds):
# Take sum along adjacent atoms
fv = F.batch_matmul(adj, x)
##print('fv', fv.shape) # (minibatch, max_num_atoms, hidden_dim)
s0, s1, s2 = fv.shape
zero_array = self.xp.zeros_like(fv)
fvds = [
F.reshape(F.where(cond, fv, zero_array), (s0 * s1, s2))
for cond in deg_conds
]
out_x = 0
dh = 0
for wout, win, fvd in zip(self.outer_weight, self.inner_weight, fvds):
out_x = out_x + win(fvd)
dh = dh + wout(fvd)
out_x = F.sigmoid(out_x)
out_x = F.reshape(out_x, (s0, s1, s2))
dh = F.softmax(dh)
dh = F.sum(F.reshape(dh, (s0, s1, s2)),
axis=1) # sum along atom's axis
out_h = h + dh
return out_x, out_h
def __call__(self, atoms, adjs):
x = self.graph_conv(atoms, adjs)
alpha = self.attention_layer(x)
x = F.batch_matmul(x, alpha)
if self.mlp:
x = self.mlp(x)
return x
def __call__(self, adj, atom_array):
counts = []
for list_atom in atom_array:
list_atom = np.array(list_atom)
count = np.count_nonzero(list_atom)
counts.append(count)
x = self.atom_embed(atom_array)
degree_mat = F.sum(adj, axis=1)
degree_mat = F.sum(degree_mat, axis=1)
s0, s1, s2 = x.shape
m = F.reshape(self.edge_layer(F.reshape(x, (s0 * s1, s2))),
(s0, s1, s2, MAX_EDGE_TYPE))
m = F.transpose(m, (0, 3, 1, 2))
adj = F.reshape(adj, (s0 * MAX_EDGE_TYPE, s1, s1))
m = F.reshape(m, (s0 * MAX_EDGE_TYPE, s1, s2))
m = F.batch_matmul(adj, m)
m = F.reshape(m, (s0, MAX_EDGE_TYPE, s1, s2))
m = F.sum(m, axis=1)
s0, s1, s2 = m.shape
m = F.reshape(m, (s0 * s1, s2))
atom_array = np.asarray(atom_array).reshape(-1)
for s_index in range(s0):
atom_array[counts[s_index] + s_index * s1:(s_index + 1) * s1] = -1
t = chainer.Variable(atom_array)
self.loss = self.loss_func(m, t)
return self.loss
def proj_tgt_to_src(vec, K, N, xp=np, use_cpu=True):
"""Projection matrix from target to sources.
Args:
vec(Variable): Shape is (N, 6).
K(array): Shape is (N, 3, 3).
N(int): Batch size.
Returns:
Variable: Projection matrix.
"""
is_transfer = False
if xp != np and use_cpu:
vec = gpu2cpu(vec)
K = chainer.cuda.to_cpu(K)
xp = np
is_transfer = True
global filler
if filler is None or filler.shape[0] != N:
filler = xp.tile(
xp.asarray([0.0, 0.0, 0.0, 1.0], 'f').reshape(1, 1, 4), [N, 1, 1])
K_ = F.concat([F.concat([K, xp.zeros([N, 3, 1], 'f')], axis=2), filler],
axis=1)
poses = pose_vec2mat(vec, filler, xp)
proj_tgt_cam_to_src_pixel = F.batch_matmul(K_, poses)
if is_transfer:
proj_tgt_cam_to_src_pixel = cpu2gpu(proj_tgt_cam_to_src_pixel)
return proj_tgt_cam_to_src_pixel
def forward(self, x):
"""
h1 : (1, 64, 112, 112)
h2 : (1, 128, 56, 56)
h3 : (1, 256, 28, 28)
h4 : (1, 512, 14, 14)
h5 : (1, 512, 7, 7)
:param x:
:return:
"""
h = x
h = F.relu((self.conv1_1(h)))
h = F.relu((self.conv1_2(h)))
pool1 = F.max_pooling_2d(h, 2, stride=2)
h = F.relu((self.conv2_1(pool1)))
h = F.relu((self.conv2_2(h)))
pool2 = F.max_pooling_2d(h, 2, stride=2)
h = F.relu((self.conv3_1(pool2)))
h = F.relu((self.conv3_2(h)))
h = F.relu((self.conv3_3(h)))
pool3 = F.max_pooling_2d(h, 2, stride=2)
h = F.relu((self.conv4_1(pool3)))
h = F.relu((self.conv4_2(h)))
h = F.relu((self.conv4_3(h)))
pool4 = F.max_pooling_2d(h, 2, stride=2)
if self.texture:
h = {
'pool1': pool1,
'pool2': pool2,
'pool3': pool3,
'pool4': pool4
}[self.texture_layer]
if self.cbp:
h = F.convolution_2d(h, self.W1) * F.convolution_2d(h, self.W2)
h = global_average_pooling_2d(h)
if self.normalize:
h = power_normalize(h)
h = F.normalize(h)
h = self.fc8(F.dropout(h, 0.2))
return h
else:
b, ch, height, width = h.data.shape
h = F.reshape(h, (b, ch, width * height))
h = F.batch_matmul(h, h, transb=True) / self.xp.float32(
width * height)
h = self.fc8(F.dropout(h, 0.4))
return h
else:
h = F.relu((self.conv5_1(pool4)))
h = F.relu((self.conv5_2(h)))
h = F.relu((self.conv5_3(h)))
h = F.max_pooling_2d(h, 2, stride=2)
h = F.dropout(F.relu(self.fc6(h)), ratio=0.5)
h = F.dropout(F.relu(self.fc7(h)), ratio=0.5)
h = self.fc8(h)
return h
def message_and_update(self, cur, adj, deg_conds, counts, level):
s0, s1, s2 = cur.shape
tmp = self.edge_layer(F.reshape(cur, (s0 * s1, s2)))
m = F.reshape(tmp, (s0, s1, s2, MAX_EDGE_TYPE))
m = F.transpose(m, (0, 3, 1, 2))
m = F.reshape(m, (s0 * MAX_EDGE_TYPE, s1, s2))
adj = F.reshape(adj, (s0 * MAX_EDGE_TYPE, s1, s1))
m = F.batch_matmul(adj, m)
m = F.reshape(m, (s0, MAX_EDGE_TYPE, s1, s2))
m = F.sum(m, axis=1)
m = m + cur
s0, s1, s2 = m.shape
zero_array = np.zeros(m.shape, dtype=np.float32)
ms = [F.reshape(F.where(cond, m, zero_array), (s0 * s1, s2))
for cond in deg_conds]
out_x = 0
for hidden_weight, m in zip(self.H[level], ms):
out_x = out_x + hidden_weight(m)
out_x = F.sigmoid(out_x)
for s_index in range(s0):
_from = counts[s_index] + s_index * s1
_to = (s_index + 1) * s1
out_x.data[_from:_to:, :] = 0.0
out_x = F.reshape(out_x, (s0, s1, s2))
return out_x
def attend(self, encoded_features):
self.out_lstm.reset_state()
transformed_encoded_features = F.concat([
F.expand_dims(self.transform_encoded_features(feature), axis=1)
for feature in encoded_features
],
axis=1)
concat_encoded_features = F.concat(
[F.expand_dims(e, axis=1) for e in encoded_features], axis=1)
lstm_output = self.xp.zeros_like(encoded_features[0])
outputs = []
for _ in range(self.num_labels):
transformed_lstm_output = self.transform_out_lstm_feature(
lstm_output)
attended_feats = []
for transformed_encoded_feature in F.separate(
transformed_encoded_features, axis=1):
attended_feat = transformed_encoded_feature + transformed_lstm_output
attended_feat = F.tanh(attended_feat)
attended_feats.append(
self.generate_attended_feat(attended_feat))
attended_feats = F.concat(attended_feats, axis=1)
alphas = F.softmax(attended_feats, axis=1)
lstm_input_feature = F.batch_matmul(alphas,
concat_encoded_features,
transa=True)
lstm_input_feature = F.squeeze(lstm_input_feature, axis=1)
lstm_output = self.out_lstm(lstm_input_feature)
outputs.append(lstm_output)
return outputs
def one_step(self, mol_reps, sub_reps, adj, atom_array, counts):
s0, s1, s2 = sub_reps.shape
tmp = self.edge_layer(F.reshape(sub_reps, (s0 * s1, s2)))
m = F.reshape(tmp, (s0, s1, s2, MAX_EDGE_TYPE))
m = F.transpose(m, (0, 3, 1, 2))
m = F.reshape(m, (s0 * MAX_EDGE_TYPE, s1, s2))
adj = F.reshape(adj, (s0 * MAX_EDGE_TYPE, s1, s1))
m = F.batch_matmul(adj, m)
m = F.reshape(m, (s0, MAX_EDGE_TYPE, s1, s2))
m = F.sum(m, axis=1)
s0, s1, s2 = m.shape
m = F.reshape(m, (s0 * s1, s2))
mol_reps = F.tile(mol_reps, (1, s1))
mol_reps = F.reshape(mol_reps, (s0 * s1, s2))
reps = mol_reps + m
atom_array = atom_array.flatten()
for s_index in range(s0):
_from = counts[s_index] + s_index * s1
_to = (s_index + 1) * s1
reps.data[_from:_to, :] = 0.0
atom_array[_from:_to] = -1
t = chainer.Variable(atom_array)
loss = F.softmax_cross_entropy(self.out(reps), t)
return loss
def setUp(self):
self.x1 = numpy.random.uniform(.5, 1, (1, m, k)).astype(numpy.float32)
self.x2 = numpy.random.uniform(.5, 1, (1, k, n)).astype(numpy.float32)
self.gy = numpy.random.uniform(-1, 1, (1, m, n)).astype(numpy.float32)
self.op = lambda x, y: F.batch_matmul(x, y)
self.forward_answer = numpy.array(
[numpy.dot(self.x1[i], self.x2[i]) for i in six.moves.range(1)])
def __call__(self, S, h):
batch_size, src_len, hidden_size = S.data.shape
S = self.inner_weight(F.reshape(S,
(batch_size * src_len, hidden_size)))
S = F.reshape(S, (batch_size, src_len, hidden_size))
a = F.softmax(F.squeeze(F.batch_matmul(S, h), axis=2))
return a
def __call__(self, x, z):
"""
Args:
x (~chainer.Variable): Batch of input vectors.
z (~chainer.Variable): Batch of context vectors.
Returns:
~chainer.Variable: Output of the context layer.
"""
if self.has_uninitialized_params:
with cuda.get_device(self._device_id):
self._initialize_params(x.size // x.shape[0])
batch_size = x.shape[0]
# compute adaptive filter
W = self.predictor(z)
# reshape linear W to the correct size
W = F.reshape(W, [batch_size] + self.shape)
# add constant W if defined
if self.constantW:
W += F.tile(self.C, (batch_size, 1, 1))
# multiply weights with inputs in batch mode
y = F.squeeze(F.batch_matmul(W, x), 2)
# add bias
y += F.tile(self.b, tuple([batch_size, 1]))
return y
def evaluate(self, images, labels):
labels = cp.array(labels)
nb_class = self.nb_class_test
images = self.xp.stack(images)
batchsize = images.shape[0]
accs = []
support_images=images[:self.nb_class_test*self.n_shot]
query_images=images[self.nb_class_test*self.n_shot:]
support_set=self.encoder(support_images,support_images.shape[0],train=False)
query_set=self.encoder(query_images,query_images.shape[0],train=False)
support_label = labels[:self.nb_class_test*self.n_shot]
average_key = F.mean(F.reshape(support_set,[self.n_shot,self.nb_class_test,-1]),axis=0)
batchsize_q = len(query_set.data)
batchsize_s = len(support_set.data)
convert_dim = nb_class*self.n_shot
W = self.Fisher(support_set,support_label,batchsize_s,nb_class,convert_dim,self.dimension,0.01)
W_batch = F.broadcast_to(W,[nb_class,convert_dim,self.dimension])
W_mean = F.batch_matmul(W_batch,average_key)
accs_tmp = self.compute_accuracy(labels[nb_class*self.n_shot:],query_set,W,W_mean,batchsize_q,nb_class,convert_dim)
accs.append(accs_tmp)
return accs
def __call__(self, x):
# <question : is batchsize>1 possible for RNN ? if No, I will implement calculations without batch dimension.>
self.chi = F.concat((x, self.r))
(self.nu, self.xi) = \
F.split_axis(self.l_dl(self.chi), [self.Y], 1)
(self.kr, self.betar, self.kw, self.betaw,
self.e, self.v, self.f, self.ga, self.gw, self.pi
) = F.split_axis(self.xi, np.cumsum(
[self.W*self.R, self.R, self.W, 1, self.W, self.W, self.R, 1, 1]), 1)
self.kr = F.reshape(self.kr, (self.R, self.W)) # R * W
self.betar = 1 + F.softplus(self.betar) # 1 * R
# self.kw: 1 * W
self.betaw = 1 + F.softplus(self.betaw) # 1 * 1
self.e = F.sigmoid(self.e) # 1 * W
# self.v : 1 * W
self.f = F.sigmoid(self.f) # 1 * R
self.ga = F.sigmoid(self.ga) # 1 * 1
self.gw = F.sigmoid(self.gw) # 1 * 1
self.pi = F.softmax(F.reshape(self.pi, (self.R, 3))) # R * 3 (softmax for 3)
# self.wr : N * R
self.psi_mat = 1 - F.matmul(Variable(np.ones((self.N, 1)).astype(np.float32)), self.f) * self.wr # N * R
self.psi = Variable(np.ones((self.N, 1)).astype(np.float32)) # N * 1
for i in range(self.R):
self.psi = self.psi * F.reshape(self.psi_mat[:,i],(self.N,1)) # N * 1
# self.ww, self.u : N * 1
self.u = (self.u + self.ww - (self.u * self.ww)) * self.psi
self.a = u2a(self.u) # N * 1
self.cw = C(self.M, self.kw, self.betaw) # N * 1
self.ww = F.matmul(F.matmul(self.a, self.ga) + F.matmul(self.cw, 1.0 - self.ga), self.gw) # N * 1
self.M = self.M * (np.ones((self.N, self.W)).astype(np.float32) - F.matmul(self.ww, self.e)) + F.matmul(self.ww, self.v) # N * W
self.p = (1.0 - F.matmul(Variable(np.ones((self.N,1)).astype(np.float32)), F.reshape(F.sum(self.ww),(1,1)))) \
* self.p + self.ww # N * 1
self.wwrep = F.matmul(self.ww, Variable(np.ones((1, self.N)).astype(np.float32))) # N * N
self.L = (1.0 - self.wwrep - F.transpose(self.wwrep)) * self.L + F.matmul(self.ww, F.transpose(self.p)) # N * N
self.L = self.L * (np.ones((self.N, self.N)) - np.eye(self.N)) # force L[i,i] == 0
self.fo = F.matmul(self.L, self.wr) # N * R
self.ba = F.matmul(F.transpose(self.L), self.wr) # N * R
self.cr_list = [0] * self.R
for i in range(self.R):
self.cr_list[i] = C(self.M, F.reshape(self.kr[i,:],(1, self.W)),
F.reshape(self.betar[0,i],(1, 1))) # N * 1
self.cr = F.concat(self.cr_list) # N * R
self.bacrfo = F.concat((F.reshape(F.transpose(self.ba),(self.R,self.N,1)),
F.reshape(F.transpose(self.cr),(self.R,self.N,1)),
F.reshape(F.transpose(self.fo) ,(self.R,self.N,1)),),2) # R * N * 3
self.pi = F.reshape(self.pi, (self.R,3,1)) # R * 3 * 1
self.wr = F.transpose(F.reshape(F.batch_matmul(self.bacrfo, self.pi), (self.R, self.N))) # N * R
self.r = F.reshape(F.matmul(F.transpose(self.M), self.wr),(1, self.R * self.W)) # W * R (-> 1 * RW)
self.y = self.l_Wr(self.r) + self.nu # 1 * Y
return self.y
def extract_style_feature(self, images, masks=None):
xp = self.xp
mean = xp.array([103.939, 116.779, 123.68], 'float32') # BGR
images = images[:, ::-1] * 255 - mean[None, :, None, None]
features = self.vgg16(
images, layers=['conv1_2', 'conv2_2', 'conv3_3',
'conv4_3']).values()
if masks is None:
masks = xp.ones(
(images.shape[0], images.shape[2], images.shape[3]))
style_features = []
for feature in features:
scale = masks.shape[-1] / feature.shape[-1]
m = cf.average_pooling_2d(masks[:, None, :, :], scale, scale).data
dim = feature.shape[1]
m = m.reshape((m.shape[0], -1))
f2 = feature.transpose((0, 2, 3, 1))
f2 = f2.reshape((f2.shape[0], -1, f2.shape[-1]))
f2 *= xp.sqrt(m)[:, :, None]
f2 = cf.batch_matmul(f2.transpose((0, 2, 1)), f2)
f2 /= dim * m.sum(axis=1)[:, None, None]
style_features.append(f2)
return style_features
def train(self, images, labels):
labels = cp.array(labels)
images = self.xp.stack(images)
batchsize = images.shape[0]
loss = 0
support_images=images[:self.nb_class_train*self.n_shot]
query_images=images[self.nb_class_train*self.n_shot:]
support_set = self.encoder(support_images,support_images.shape[0],train=True)
query_set=self.encoder(query_images,query_images.shape[0],train=True)
support_label = labels[:self.nb_class_train*self.n_shot]
average_key = F.mean(F.reshape(support_set,[self.n_shot ,self.nb_class_train,-1]),axis=0)#augment_ratio*self.n_shot
batchsize_q = len(query_set.data)
batchsize_s = len(support_set.data)
convert_dim = self.nb_class_train * self.n_shot
W = self.Fisher(support_set,support_label,batchsize_s,self.nb_class_train,convert_dim,self.dimension,0.01)
W_batch = F.broadcast_to(W,[self.nb_class_train,convert_dim,self.dimension])
W_mean = F.batch_matmul(W_batch,average_key)
loss = self.compute_loss(labels[self.nb_class_train*self.n_shot:],query_set,W,W_mean,batchsize_q,self.nb_class_train,convert_dim)
self.chain.zerograds()
loss.backward()
self.optimizer.update()
return loss.data
def __call__(self, a_list, b_list, p):
batch_size = p.data.shape[0]
e_list = []
sum_e = XP.fzeros((batch_size, 1))
for a, b in zip(a_list, b_list):
w = functions.tanh(self.aw(a) + self.bw(b) + self.pw(p))
e = functions.exp(self.we(w))
e_list.append(e)
sum_e += e
ZEROS = XP.fzeros((batch_size, self.hidden_size))
aa = ZEROS
bb = ZEROS
for a, b, e in zip(a_list, b_list, e_list):
e /= sum_e
aa += functions.reshape(functions.batch_matmul(a, e), (batch_size, self.hidden_size))
bb += functions.reshape(functions.batch_matmul(b, e), (batch_size, self.hidden_size))
return aa, bb
def cosine_similarity(x, y, eps=1e-6):
n1, n2, n3 = x.data.shape
_, m2, _ = y.data.shape
z = F.batch_matmul(x, y, transb=True)
x2 = F.broadcast_to(F.reshape(F.sum(x * x, axis=2), (n1, n2, 1)), (n1, n2, m2))
y2 = F.broadcast_to(F.reshape(F.sum(y * y, axis=2), (n1, 1, m2)), (n1, n2, m2))
z /= F.exp(F.log(x2 * y2 + eps) / 2)
return z
def setUp(self):
self.x1 = numpy.random.uniform(
.5, 1, (batch_size, m,)).astype(numpy.float32)
self.x2 = numpy.random.uniform(
.5, 1, (batch_size, m,)).astype(numpy.float32)
self.gy = numpy.random.uniform(
-1, 1, (batch_size, m, m)).astype(numpy.float32)
self.op = lambda x, y: F.batch_matmul(x, y, transb=True)
self.forward_answer = numpy.array([
numpy.dot(self.x1[i].reshape(m, 1), self.x2[i].reshape(1, m))
for i in six.moves.range(batch_size)])
def setUp(self):
self.x1 = numpy.random.uniform(
.5, 1, (1, m, k)).astype(numpy.float32)
self.x2 = numpy.random.uniform(
.5, 1, (1, k, n)).astype(numpy.float32)
self.gy = numpy.random.uniform(
-1, 1, (1, m, n)).astype(numpy.float32)
self.op = lambda x, y: F.batch_matmul(x, y)
self.forward_answer = numpy.array([
numpy.dot(self.x1[i], self.x2[i])
for i in six.moves.range(1)])
def setUp(self):
self.x1 = numpy.random.uniform(
.5, 1, (batch_size, m, k)).astype(numpy.float32)
self.x2 = numpy.random.uniform(
.5, 1, (k, n)).astype(numpy.float32)
self.gy = numpy.random.uniform(
-1, 1, (batch_size, m, n)).astype(numpy.float32)
self.op = lambda x, y: F.batch_matmul(
x, F.broadcast_to(F.expand_dims(y, 0), (batch_size, k, n)))
self.forward_answer = numpy.array([
numpy.dot(self.x1[i], self.x2)
for i in six.moves.range(batch_size)])
def __call__(self, x1,x2):
"""Applies the linear layer.
Args:
x (~chainer.Variable): Batch of input vectors.
Returns:
~chainer.Variable: Output of the linear layer.
"""
batch_size = x.data.shape[0]
#print batch_size
batch_W = F.concat([F.expand_dims(self.W,0)] * batch_size,0)
#print batch_W.data.shape
return F.reshape(F.batch_matmul(x, batch_W),x.data.shape[:-1])
def forward(self, data):
self.reset_state()
x_list = [XP.iarray([d[0]]) for d in data]
pe_list = [self.p_embed(x) for x in x_list]
ce_list = [self.c_embed(x) for x in x_list]
re_list = [self.r_embed(x) for x in x_list]
pf_list = []
for pe in pe_list:
pf_list.append(self.p_forward(pe))
cf_list = []
for ce in ce_list:
cf_list.append(self.c_forward(ce))
rf_list = []
for re in re_list:
rf_list.append(self.r_forward(re))
pb_list = []
for pe in reversed(pe_list):
pb_list.append(self.p_backward(pe))
cb_list = []
for ce in reversed(ce_list):
cb_list.append(self.c_backward(ce))
rb_list = []
for re in reversed(re_list):
rb_list.append(self.r_backward(re))
pc_list = [self.p_combine(pf, pb) for pf, pb in zip(pf_list, pb_list)]
cc_list = [self.c_combine(cf, cb) for cf, cb in zip(cf_list, cb_list)]
rc_list = [self.r_combine(rf, rb) for rf, rb in zip(rf_list, rb_list)]
P = functions.reshape(
functions.concat(pc_list, 0),
(1, len(data), self.hidden_size))
C = functions.reshape(
functions.concat(cc_list, 0),
(1, len(data), self.hidden_size))
R = functions.concat(rc_list, 0)
parent_scores = functions.reshape(
functions.batch_matmul(C, P, transb=True),
(len(data), len(data)))
root_scores = functions.reshape(
self.r_scorer(R),
(1, len(data)))
return parent_scores, root_scores
def __call__(self, x, t):
h = F.relu(self.conv1_1(x))
h = F.relu(self.conv1_2(h))
h = F.max_pooling_2d(h, 2, stride=2)
h = F.relu(self.conv2_1(h))
h = F.relu(self.conv2_2(h))
h = F.max_pooling_2d(h, 2, stride=2)
h = F.relu(self.conv3_1(h))
h = F.relu(self.conv3_2(h))
h = F.relu(self.conv3_3(h))
h = F.max_pooling_2d(h, 2, stride=2)
h = F.relu(self.conv4_1(h))
h = F.relu(self.conv4_2(h))
h = F.relu(self.conv4_3(h))
h = F.max_pooling_2d(h, 2, stride=2)
h = F.relu(self.conv5_1(h))
h = F.relu(self.conv5_2(h))
h = F.relu(self.conv5_3(h))
h = F.max_pooling_2d(h, 2, stride=2)
h = F.relu(self.fc6(h))
h = F.relu(self.fc7(h))
h = self.fc8(h)
# Channelwise Inhibited
h = F.split_axis(h, 3, 1)
c = F.reshape(h[self.c], (x.data.shape[0], 16, 16))
xp = cuda.get_array_module(x.data)
volatile = False if t is not None else True
z = Variable(xp.zeros_like(c.data), volatile=volatile)
c = F.batch_matmul(c, z)
c = F.reshape(c, (x.data.shape[0], 1, 16, 16))
hs = []
for i, s in enumerate(h):
if i == self.c:
hs.append(c)
else:
hs.append(s)
self.pred = F.concat(hs, 1)
if t is not None:
self.loss = F.softmax_cross_entropy(self.pred, t)
self.loss /= 16 * 16
return self.loss
else:
self.pred = F.softmax(self.pred)
return self.pred
def __call__(self, x):
"""Applies the linear layer.
Args:
x (~chainer.Variable): Batch of input vectors.
Returns:
~chainer.Variable: Output of the linear layer.
"""
if self.has_uninitialized_params:
self._initialize_params(x.shape[1])
# return linear.linear(x, self.W, self.b)
batch_size = x.data.shape[1]
return F.transpose(F.reshape(batch_matmul(x, self.W), (self.out_size, batch_size)))
def setUp(self):
self.x1 = numpy.random.uniform(.5, 1, self.x1_shape)
self.x1 = self.x1.astype(self.x1_dtype)
self.x2 = numpy.random.uniform(.5, 1, self.x2_shape)
self.x2 = self.x2.astype(self.x2_dtype)
ret_dtype = numpy.result_type(self.x1_dtype, self.x2_dtype)
self.gy = numpy.random.uniform(-1, 1, self.gy_shape).astype(ret_dtype)
self.ggx1 = numpy.random.uniform(.5, 1, self.x1_shape).astype(
self.x1_dtype)
self.ggx2 = numpy.random.uniform(.5, 1, self.x2_shape).astype(
self.x2_dtype)
self.op = lambda x, y: F.batch_matmul(
x, y, transa=self.transa, transb=self.transb)
self.forward_answer = self._get_forward_answer(
self.x1, self.x2, self.transa, self.transb)
def channelwise_inhibited(self, h):
xp = cuda.get_array_module(h.data)
num = h.data.shape[0]
h = F.split_axis(h, 3, 1)
c = F.reshape(h[self.c], (num, 16, 16))
z = Variable(xp.zeros_like(c.data), 'AUTO')
c = F.batch_matmul(c, z)
c = F.reshape(c, (num, 1, 16, 16))
hs = []
for i, s in enumerate(h):
if i == self.c:
hs.append(c)
else:
hs.append(s)
return F.concat(hs, 1)
def _context(self, p, fb_mat, fbe_mat):
batch_size, source_length, _ = fb_mat.data.shape
# {pe,e}_mat: shape = [batch * srclen, atten]
pe_mat = F.reshape(
F.broadcast_to(
F.expand_dims(self.p_e(p), 1),
[batch_size, source_length, self.atten_size]),
[batch_size * source_length, self.atten_size])
e_mat = F.tanh(fbe_mat + pe_mat)
# a_mat: shape = [batch, srclen]
a_mat = F.softmax(F.reshape(self.e_a(e_mat), [batch_size, source_length]))
# q: shape = [batch, 2 * hidden]
q = F.reshape(
F.batch_matmul(a_mat, fb_mat, transa=True),
[batch_size, 2 * self.hidden_size])
return q
def _attention(self, h_forward, h_backword, s, enable, disable_value):
batch_size = s.shape[0]
sentence_size = len(h_forward)
hidden_size = self.hidden_size
xp = self.xp
weighted_s = F.broadcast_to(F.expand_dims(self.W_a(s), axis=1),
(batch_size, sentence_size, hidden_size))
h = F.concat((F.concat(h_forward, axis=0), F.concat(h_backword, axis=0)))
weighted_h = F.reshape(self.U_a(h), (batch_size, sentence_size, hidden_size))
e = self.v_a(F.reshape(F.tanh(weighted_s + weighted_h),
(batch_size * sentence_size, hidden_size)))
e = F.where(enable, F.reshape(e, (batch_size, sentence_size)), disable_value)
alpha = F.softmax(e)
c = F.batch_matmul(F.reshape(h, (batch_size, 2 * hidden_size, sentence_size)), alpha)
return F.reshape(c, (batch_size, 2 * hidden_size))
def _additional_score(self, y, a, src):
batch_size = len(y.data)
vocab_size = self._output
xp = self._xp
src_len = len(self.prob_dict)
# Calculating dict prob
y_dict = F.reshape(F.batch_matmul(self.prob_dict, a, transa=True), (batch_size, vocab_size))
is_prob = False
# Using dict prob
if self._method == "bias":
yp = y + F.log(eps + y_dict)
elif self._method == "linear":
yp = self.LI(y_dict, F.softmax(y))
is_prob = True
else:
raise ValueError("Unrecognized dictionary method:", self._method)
return yp, is_prob
def __call__(self, s, a, h):
c = F.reshape(F.batch_matmul(a, s, transa=True), h.data.shape)
ht = F.tanh(self.WC(F.concat((h, c), axis=1)))
return self.WS(ht)
def __forward(self, is_training, src_batch, trg_batch = None, generation_limit = None):
m = self.__model
tanh = functions.tanh
lstm = functions.lstm
batch_size = len(src_batch)
hidden_size = self.__n_hidden
src_len = len(src_batch[0])
trg_len = len(trg_batch[0]) - 1 if is_training else generation_limit
src_stoi = self.__src_vocab.stoi
trg_stoi = self.__trg_vocab.stoi
trg_itos = self.__trg_vocab.itos
hidden_zeros = wrapper.zeros((batch_size, hidden_size))
sum_e_zeros = wrapper.zeros((batch_size, 1))
# make embedding
list_x = []
for l in range(src_len):
s_x = wrapper.make_var([src_stoi(src_batch[k][l]) for k in range(batch_size)], dtype=np.int32)
list_x.append(s_x)
# forward encoding
c = hidden_zeros
s_a = hidden_zeros
list_a = []
for l in range(src_len):
s_x = list_x[l]
s_i = tanh(m.w_xi(s_x))
c, s_a = lstm(c, m.w_ia(s_i) + m.w_aa(s_a))
list_a.append(s_a)
# backward encoding
c = hidden_zeros
s_b = hidden_zeros
list_b = []
for l in reversed(range(src_len)):
s_x = list_x[l]
s_i = tanh(m.w_xi(s_x))
c, s_b = lstm(c, m.w_ib(s_i) + m.w_bb(s_b))
list_b.insert(0, s_b)
# decoding
c = hidden_zeros
s_p = tanh(m.w_ap(list_a[-1]) + m.w_bp(list_b[0]))
s_y = wrapper.make_var([trg_stoi('<s>') for k in range(batch_size)], dtype=np.int32)
hyp_batch = [[] for _ in range(batch_size)]
accum_loss = wrapper.zeros(()) if is_training else None
#for n in range(src_len):
# six.print_(src_batch[0][n], end=' ')
#six.print_()
for l in range(trg_len):
# calculate attention weights
list_e = []
sum_e = sum_e_zeros
for n in range(src_len):
s_w = tanh(m.w_aw(list_a[n]) + m.w_bw(list_b[n]) + m.w_pw(s_p))
r_e = functions.exp(m.w_we(s_w))
#list_e.append(functions.concat(r_e for _ in range(self.__n_hidden)))
list_e.append(r_e)
sum_e += r_e
#sum_e = functions.concat(sum_e for _ in range(self.__n_hidden))
# make attention vector
s_c = hidden_zeros
s_d = hidden_zeros
for n in range(src_len):
s_e = list_e[n] / sum_e
#s_c += s_e * list_a[n]
#s_d += s_e * list_b[n]
s_c += functions.reshape(functions.batch_matmul(list_a[n], s_e), (batch_size, hidden_size))
s_d += functions.reshape(functions.batch_matmul(list_b[n], s_e), (batch_size, hidden_size))
#zxcv = wrapper.get_data(s_e)[0][0]
#if zxcv > 0.9: asdf='#'
#elif zxcv > 0.7: asdf='*'
#elif zxcv > 0.3: asdf='+'
#elif zxcv > 0.1: asdf='.'
#else: asdf=' '
#six.print_(asdf * len(src_batch[0][n]), end=' ')
# generate next word
c, s_p = lstm(c, m.w_yp(s_y) + m.w_pp(s_p) + m.w_cp(s_c) + m.w_dp(s_d))
r_y = m.w_py(s_p)
output = wrapper.get_data(r_y).argmax(1)
for k in range(batch_size):
hyp_batch[k].append(trg_itos(output[k]))
#six.print_(hyp_batch[0][-1])
if is_training:
s_t = wrapper.make_var([trg_stoi(trg_batch[k][l + 1]) for k in range(batch_size)], dtype=np.int32)
accum_loss += functions.softmax_cross_entropy(r_y, s_t)
s_y = s_t
else:
if all(hyp_batch[k][-1] == '</s>' for k in range(batch_size)): break
s_y = wrapper.make_var(output, dtype=np.int32)
return hyp_batch, accum_loss
def test_identity_gpu(self):
eye = cuda.to_gpu(_make_eye(self.x.shape))
x = chainer.Variable(cuda.to_gpu(self.x))
y = functions.batch_matmul(x, functions.batch_inv(x))
gradient_check.assert_allclose(y.data, eye, rtol=1e-4, atol=1e-4)
usedvoclist_new3 = usedvoclist[np.array(sum_list2) > 5]
initialpolarityVec = np.zeros((len(usedvoclist_new3),1))
for index, word in enumerate(usedvoclist_new3):
try:
#polarity = pne2[word]
initialpolarityVec[index] = pne2[word]
except:
continue
x_batch = chainer.Variable(np.array(kakariukeMat_list3[0:10]).astype(np.float32))
x_batch_1 = chainer.Variable(np.array(kakariukeMat_list_1[0:10]).astype(np.float32))
x_batch_2 = chainer.Variable(np.array(kakariukeMat_list_2[0:10]).astype(np.float32))
polarity_val = chainer.Variable(initialpolarityVec.astype(np.float32))
batch_W = F.concat([F.expand_dims(polarity_val,0)] * 10,0)
v1 = F.reshape(F.batch_matmul(x_batch_1, batch_W),(10,483))
v2 = F.reshape(F.batch_matmul(x_batch_2, batch_W),(10,483))
l_hidden1(v1)
l_hidden2(v1)
import chainer
from chainer.functions.connection import linear
from chainer.fåunctions import batch_matmul
from chainer import initializers
from chainer import link
import chainer.functions as F
import numpy as xp
class TensorMat(link.Link):
def __init__(self, initialW, wscale=1, bias=0, nobias=True,
initial_bias=None):
def get_matrix(y):
ch = y.data.shape[1]
wd = y.data.shape[2]
gogh_y = F.reshape(y, (y.data.shape[0],ch,wd**2))
gogh_matrix = F.batch_matmul(gogh_y, gogh_y, transb=True)/np.float32(ch*wd**2)
return gogh_matrix
def forward_onestep(self, x_data, y_data, state, train=True):
batchsize = x_data.shape[0]
x = chainer.Variable(x_data, volatile=not train)
# lstm
if y_data is not None:
y = chainer.Variable(self.xp.array(y_data, dtype=self.xp.int32), volatile=not train)
h_in = self.chain.lstm_xh(x) + \
self.chain.lstm_yh(y) + \
self.chain.lstm_rh(state['r']) + \
self.chain.lstm_hh(state['h'])
else:
h_in = self.chain.lstm_xh(x) + \
self.chain.lstm_rh(state['r']) + \
self.chain.lstm_hh(state['h'])
c_t, h_t = F.lstm(state['c'], h_in)
key = F.reshape(self.chain.l_key(h_t), (batchsize, self.nb_reads, self.memory_shape[1]))
add = F.reshape(self.chain.l_add(h_t), (batchsize, self.nb_reads, self.memory_shape[1]))
sigma = self.chain.l_sigma(h_t)
# Compute least used weight (not differentiable)
if self.xp == cp:
wu_tm1_data = cp.copy(state['used_weight'].data)
lu_index = np.argsort(cuda.to_cpu(wu_tm1_data), axis=1)[:,:self.nb_reads]
else:
wu_tm1_data = state['used_weight'].data
lu_index = np.argsort(wu_tm1_data, axis=1)[:,:self.nb_reads]
wlu_tm1_data = self.xp.zeros((batchsize, self.memory_shape[0]),
dtype=self.xp.float32)
for i in range(batchsize):
for j in range(self.nb_reads):
wlu_tm1_data[i,lu_index[i,j]] = 1. # 1 for least used index
wlu_tm1 = chainer.Variable(wlu_tm1_data, volatile=not train)
# write weight
_wlu_tm1 = F.broadcast_to(
F.reshape(wlu_tm1, (batchsize, 1, self.memory_shape[0])),
(batchsize, self.nb_reads, self.memory_shape[0]))
_sigma = F.broadcast_to(F.reshape(sigma, (batchsize, 1, 1)),
(batchsize, self.nb_reads, self.memory_shape[0]))
ww_t = _sigma * state['read_weight'] + (1 - _sigma) * _wlu_tm1
# write to memory
_lu_mask = 1 - F.broadcast_to(
F.reshape(wlu_tm1, (batchsize, self.memory_shape[0], 1)),
(batchsize, self.memory_shape[0], self.memory_shape[1]))
M_t = state['M'] * _lu_mask + F.batch_matmul(ww_t, add, transa=True)
# read from memory
K_t = cosine_similarity(key, M_t)
# read weight, used weight
wr_t = F.reshape(F.softmax(F.reshape(
K_t, (-1, self.memory_shape[0]))),
(batchsize, self.nb_reads, self.memory_shape[0]))
wu_t = self.gamma * state['used_weight'] + F.sum(wr_t, axis=1) + F.sum(ww_t, axis=1)
# read memory
r_t = F.reshape(F.batch_matmul(wr_t, M_t), (batchsize, -1)) # (batchsize, nb_reads * memory_shape[1])
# set to state
state_new = {
'M': M_t,
'c': c_t,
'h': h_t,
'r': r_t,
'read_weight': wr_t,
'used_weight': wu_t,
}
return state_new
if n < 60:
preW[n][0][0] = np.random.rand()
if (n < 80) & (n > 20):
preW[n][0][-1] = -np.random.rand()
preWdict[n] = dict(zip(preW_namelist_dic[n].T,preW[n].T))
#target4 = np.r_[2 * np.ones(datavolume),np.ones(datavolume), np.zeros(datavolume)]
target4 = np.r_[np.ones(datavolume), np.zeros(datavolume)]
topdocveccategoryMat3_bow = np.concatenate([topdocveccategoryMat3[i] for i in range(200)],axis = 1)
preW_bow = np.concatenate([preW[i] for i in range(200)],axis = 1)
F.batch_matmul(x_batch,chainer.Variable(preW_bow))
(x_batch * chainer.Variable(preW_bow)).data.shape
topdocveccategoryMat3_bow*(np.ones((2000,1))*preW_bow)
W_category = np.concatenate([np.r_[np.zeros((l*30,1)),np.ones((30,1)),np.zeros(((DimentionN - 1 - l)*30,1))] for l in range(DimentionN)],axis = 1)
F.batch_matmul(x_batch,preW_bow)
class IIalgorithm_highspeed(Chain):
def __init__(self,preW_bow, initialW, W_category, DimentionN,binary = True):
if binary == True:
super(IIalgorithm_highspeed, self).__init__(
l_output = L.Linear(len(preW), 2,wscale = 0.01, initialW = initialW),
l_polarity = yousoseki.Yousoseki(topdocveccategoryMat3_bow.shape[1],initialW= preW_bow)
)
else:
super(IIalgorithm_simple_gpu_4, self).__init__(
def test_identity_cpu(self):
eye = _make_eye(self.x.shape)
x = chainer.Variable(self.x)
y = functions.batch_matmul(x, functions.batch_inv(x))
gradient_check.assert_allclose(y.data, eye,
**self.check_forward_options)