def get_local_ip_address(target='google.com'):
'Return None on error or if internet connection is absent.'
ipaddr = None
if not isInternetConnected():
nTwarning("Failed to get IP address because no internet connection was detected.")
return ipaddr
# end if
try:
s = socket.socket(socket.AF_INET, socket.SOCK_DGRAM)
s.connect((target, 8000))
ipaddr = s.getsockname()[0]
s.close()
except:
nTwarning("Failed to get IP address because no connection to [%s] could be established." % target)
# end try
return ipaddr
def get_local_ip_address(target='google.com'):
'Return None on error or if internet connection is absent.'
ipaddr = None
if not isInternetConnected():
nTwarning(
"Failed to get IP address because no internet connection was detected."
)
return ipaddr
# end if
try:
s = socket.socket(socket.AF_INET, socket.SOCK_DGRAM)
s.connect((target, 8000))
ipaddr = s.getsockname()[0]
s.close()
except:
nTwarning(
"Failed to get IP address because no connection to [%s] could be established."
% target)
# end try
return ipaddr
def _test_PDBEntryLists(self):
if not cing.internetConnected:
nTdebug(
"Skipping checks for there is no internet connection detected")
return
cingDirTmpTest = os.path.join(cingDirTmp, getCallerName())
mkdirs(cingDirTmpTest)
self.failIf(os.chdir(cingDirTmpTest),
msg="Failed to change to test directory for files: " +
cingDirTmpTest)
if False:
status = isInternetConnected()
nTdebug("isInternetConnected: %s" % status)
self.assertTrue(status)
if False:
a = getBmrbNmrGridEntriesDOCRDone()
nTdebug("getBmrbNmrGridEntriesDOCRDone NMR: %d %s" % (len(a), a))
self.assertTrue(a)
if False:
a = getBmrbNmrGridEntries()
nTdebug("getBmrbNmrGridEntries NMR : %d %s" %
(len(a), a))
self.assertTrue(a)
self.assertTrue(
len(a) > 5000) # Fails if NRG is down or corrupted.
if False:
# fast check because there are only a few.
nmrSolidExpList = getPdbEntries(onlySolidState=True)
self.assertTrue(nmrSolidExpList)
self.assertTrue(len(nmrSolidExpList) >= 35) # November 10, 2009
nTdebug("getPdbEntries NMR solid: %d" % (len(nmrSolidExpList)))
if False:
nmrExpList = getPdbEntries(onlyNmr=True,
mustHaveExperimentalNmrData=True)
self.assertTrue(nmrExpList)
self.assertTrue(len(nmrExpList) >= 5385) # November 10, 2009
nTdebug("getPdbEntries NMR exp: %d" % (len(nmrExpList)))
if 0:
nmrList = getPdbEntries(onlyNmr=True)
self.assertTrue(nmrList)
nTdebug("getPdbEntries NMR: %d" % (len(nmrList)))
nTdebug("getPdbEntries NMR: %s" % str(nmrList))
for entry_code in nmrList:
if len(entry_code) != 4:
nTerror("No entry code: %s" % str(entry_code))
self.assertTrue(len(nmrList) >= 8800)
# end for
if False:
pdbList = getPdbEntries(onlyNmr=False)
self.assertTrue(pdbList)
self.assertTrue(len(pdbList) >= 61248)
nTdebug("getPdbEntries ALL: %d" % (len(pdbList)))
if False:
pdbList = getPdbEntries(mustHaveExperimentalNmrData=True)
self.assertTrue(pdbList)
self.assertTrue(len(pdbList) >= 1)
nTdebug("getPdbEntries exp: %d" % (len(pdbList)))
# nTdebug("%s" % pdbList)
if True:
matches_many2one = getBmrbLinks()
self.assertTrue(matches_many2one)
inputPdbId = '1brv'
bmrb_id = matches_many2one[inputPdbId]
# self.assertEqual(pdb_id,inputPdbId)
self.assertEqual(bmrb_id, '4020')
def _test_PDBEntryLists(self):
if not cing.internetConnected:
nTdebug("Skipping checks for there is no internet connection detected")
return
cingDirTmpTest = os.path.join( cingDirTmp, getCallerName() )
mkdirs( cingDirTmpTest )
self.failIf(os.chdir(cingDirTmpTest), msg =
"Failed to change to test directory for files: " + cingDirTmpTest)
if False:
status = isInternetConnected()
nTdebug("isInternetConnected: %s" % status)
self.assertTrue(status)
if False:
a = getBmrbNmrGridEntriesDOCRDone()
nTdebug("getBmrbNmrGridEntriesDOCRDone NMR: %d %s" % (len(a), a))
self.assertTrue(a)
if False:
a = getBmrbNmrGridEntries()
nTdebug("getBmrbNmrGridEntries NMR : %d %s" % (len(a), a))
self.assertTrue(a)
self.assertTrue(len(a) > 5000) # Fails if NRG is down or corrupted.
if False:
# fast check because there are only a few.
nmrSolidExpList = getPdbEntries(onlySolidState = True)
self.assertTrue(nmrSolidExpList)
self.assertTrue(len(nmrSolidExpList) >= 35) # November 10, 2009
nTdebug("getPdbEntries NMR solid: %d" % (len(nmrSolidExpList)))
if False:
nmrExpList = getPdbEntries(onlyNmr = True, mustHaveExperimentalNmrData = True)
self.assertTrue(nmrExpList)
self.assertTrue(len(nmrExpList) >= 5385) # November 10, 2009
nTdebug("getPdbEntries NMR exp: %d" % (len(nmrExpList)))
if 0:
nmrList = getPdbEntries(onlyNmr = True)
self.assertTrue(nmrList)
nTdebug("getPdbEntries NMR: %d" % (len(nmrList)))
nTdebug("getPdbEntries NMR: %s" % str(nmrList))
for entry_code in nmrList:
if len(entry_code) != 4:
nTerror("No entry code: %s" % str(entry_code))
self.assertTrue(len(nmrList) >= 8800)
# end for
if False:
pdbList = getPdbEntries(onlyNmr = False)
self.assertTrue(pdbList)
self.assertTrue(len(pdbList) >= 61248)
nTdebug("getPdbEntries ALL: %d" % (len(pdbList)))
if False:
pdbList = getPdbEntries(mustHaveExperimentalNmrData = True)
self.assertTrue(pdbList)
self.assertTrue(len(pdbList) >= 1)
nTdebug("getPdbEntries exp: %d" % (len(pdbList)))
# nTdebug("%s" % pdbList)
if True:
matches_many2one = getBmrbLinks()
self.assertTrue(matches_many2one)
inputPdbId = '1brv'
bmrb_id = matches_many2one[inputPdbId]
# self.assertEqual(pdb_id,inputPdbId)
self.assertEqual(bmrb_id, '4020')
