def __init__(self):
super(MainWidget, self).__init__()
try:
with open('bkp.pickle', 'rb') as bkp_in:
self.uni_controler = pickle.load(bkp_in)
except:
self.uni_controler = Runner()
self.cli_tree_output = TreeShow()
self.cli_tree_output(self.uni_controler)
self.cur_html = None
self.cur_pick = None
self.cur_json = None
main_box = QVBoxLayout()
h_main_splitter = QSplitter()
h_main_splitter.setOrientation(Qt.Horizontal)
self.tree_out = TreeNavWidget()
self.tree_out.clicked[QModelIndex].connect(self.item_clicked)
self.tree_out.update_me(self.uni_controler.step_list[0],
self.uni_controler.current)
h_main_splitter.addWidget(self.tree_out)
self.centre_widget = CentreWidget()
self.centre_widget.run_btn.clicked.connect(self.run_clicked)
h_main_splitter.addWidget(self.centre_widget)
self.cli_out = CliOutView()
self.web_view = WebTab()
self.img_view = MyImgWin()
self.my_tabs = QTabWidget()
self.my_tabs.addTab(self.img_view, "Image View")
self.my_tabs.addTab(self.cli_out, "CLI Output")
self.my_tabs.addTab(self.web_view, "Report View")
h_main_splitter.addWidget(self.my_tabs)
main_box.addWidget(h_main_splitter)
self.custom_thread = MyThread()
self.custom_thread.finished.connect(self.update_after_finished)
self.custom_thread.str_print_signal.connect(self.cli_out.add_txt)
self.main_widget = QWidget()
self.main_widget.setLayout(main_box)
self.setCentralWidget(self.main_widget)
def __init__(self):
super(MainWidget, self).__init__()
self.my_pop = None # Any child popup windows. Only bravais_table ATM
self.storage_path = sys_arg.directory
refresh_gui = False
# Load the previous state of DUI, if present
dui_files_path = os.path.join(self.storage_path, "dui_files")
if os.path.isfile(os.path.join(dui_files_path, "bkp.pickle")):
try:
self.idials_runner = load_previous_state(dui_files_path)
except Exception as e:
# Something went wrong - tell the user then close
msg = traceback.format_exc()
logger.error("ERROR LOADING PREVIOUS DATA:\n%s", msg)
raise_from(DUIDataLoadingError(msg), e)
refresh_gui = True
else:
# No dui_files path - start with a fresh state
if not os.path.isdir(dui_files_path):
os.mkdir(dui_files_path)
self.idials_runner = Runner()
self.gui2_log = {"pairs_list": []}
self.cli_tree_output = TreeShow()
self.cli_tree_output(self.idials_runner)
self.cur_html = None
self.cur_pick = None
self.cur_json = None
self.cur_log = None
self.cur_cmd_name = "None"
main_box = QVBoxLayout()
self.centre_par_widget = ControlWidget()
self.centre_par_widget.pass_sys_arg_object_to_import(sys_arg)
self.stop_run_retry = StopRunRetry()
self.tree_out = TreeNavWidget()
left_control_box = QHBoxLayout()
left_top_control_box = QVBoxLayout()
left_top_control_box.addWidget(self.centre_par_widget)
left_top_control_box.addStretch()
left_control_box.addLayout(left_top_control_box)
centre_control_box = QVBoxLayout()
v_control_splitter = QSplitter()
v_control_splitter.setOrientation(Qt.Vertical)
v_control_splitter.addWidget(self.tree_out)
v_control_splitter.addWidget(self.centre_par_widget.step_param_widg)
centre_control_box.addWidget(v_control_splitter)
centre_control_box.addWidget(self.stop_run_retry)
left_control_box.addLayout(centre_control_box)
dummy_left_widget = QWidget()
dummy_h_layout = QHBoxLayout()
dummy_h_layout.addLayout(left_control_box)
dummy_left_widget.setLayout(dummy_h_layout)
dummy_left_widget.setSizePolicy(QSizePolicy.Expanding, QSizePolicy.Expanding)
h_main_splitter = QSplitter()
h_main_splitter.setOrientation(Qt.Horizontal)
h_main_splitter.addWidget(dummy_left_widget)
self.cli_out = CliOutView()
self.web_view = WebTab()
self.img_view = MyImgWin()
self.ext_view = OuterCaller()
self.info_widget = InfoWidget()
self.output_info_tabs = QTabWidget()
self.output_info_tabs.addTab(self.img_view, "Image")
self.output_info_tabs.addTab(self.cli_out, "Log")
self.output_info_tabs.addTab(self.web_view, "Report")
self.output_info_tabs.addTab(self.ext_view, "Tools")
self.output_info_tabs.addTab(self.info_widget, "Experiment")
self.view_tab_num = 0
self.output_info_tabs.currentChanged.connect(self.tab_changed)
self.img_view.mask_applied.connect(self.pop_mask_list)
self.img_view.predic_changed.connect(self.tab_changed)
self.img_view.bc_applied.connect(self.pop_b_centr_coord)
self.img_view.new_pars_applied.connect(self.pass_parmams)
# self.ext_view.pass_parmam_lst.connect(self.pass_parmams)
self.centre_par_widget.finished_masking.connect(self.img_view.unchec_my_mask)
self.centre_par_widget.click_mask.connect(self.img_view.chec_my_mask)
self.centre_par_widget.finished_b_centr.connect(self.img_view.unchec_b_centr)
self.centre_par_widget.click_b_centr.connect(self.img_view.chec_b_centr)
v_info_splitter = QSplitter()
v_info_splitter.setOrientation(Qt.Vertical)
v_info_splitter.addWidget(self.output_info_tabs)
h_main_splitter.addWidget(v_info_splitter)
main_box.addWidget(h_main_splitter)
self.txt_bar = Text_w_Bar()
main_box.addWidget(self.txt_bar)
self.connect_all()
self.custom_thread = CommandThread()
self.custom_thread.finished.connect(self.update_after_finished)
self.custom_thread.str_fail_signal.connect(self.after_failed)
self.custom_thread.str_print_signal.connect(self.cli_out.add_txt)
self.custom_thread.str_print_signal.connect(self.txt_bar.setText)
self.custom_thread.busy_box_on.connect(self.pop_busy_box)
self.custom_thread.busy_box_off.connect(self.close_busy_box)
self.main_widget = QWidget()
self.main_widget.setLayout(main_box)
self.setCentralWidget(self.main_widget)
self.setWindowTitle("CCP4 DUI - {}: {}".format(__version__,
dui_files_path))
self.setWindowIcon(QIcon(self.stop_run_retry.dials_logo_path))
self.just_reindexed = False
self.user_stoped = False
self.reconnect_when_ready()
self.my_pop = None
if refresh_gui:
self.refresh_my_gui()
except BaseException as e:
# We don't want to catch bare exceptions but don't know
# what this was supposed to catch. Log it.
logger.debug("Caught unknown exception type %s: %s", type(e).__name__, e)
logger.debug("no pickle file available")
return ref_pkl, pre_pkl
def get_next_from_here(self):
return self.current_node.get_next_step()
if __name__ == "__main__" and __package__ is None:
tree_output = TreeShow()
storage_path = sys_arg.directory
try:
with open(storage_path + "/dui_files/bkp.pickle", "rb") as bkp_in:
idials_runner = pickle.load(bkp_in)
# TODO sometimes the following error appears
# Attribute not found
# 'module' object has no attribute 'CommandNode'
except Exception as e:
print("str(e) = %s", str(e))
print("e.__doc__ = %s", e.__doc__)
print("e.message = %s", e.message)
idials_runner = Runner()
def __init__(self):
super(MainWidget, self).__init__()
self.storage_path = sys_arg.directory
try:
with open (self.storage_path + "/dui_files/bkp.pickle", "rb") as bkp_in:
self.idials_runner = pickle.load(bkp_in)
#TODO sometimes the following error appears
#Attribute not found
#'module' object has no attribute 'CommandNode'
except Exception as e:
print "str(e) =", str(e)
print "e.__doc__ =", e.__doc__
print "e.message =", e.message
self.idials_runner = Runner()
try:
import shutil
shutil.rmtree(self.storage_path + "/dui_files")
except:
print "failed to do \"shutil.rmtree(\"/dui_files\")\""
os.mkdir(self.storage_path + "/dui_files")
#This flag makes the behaviour switch (automatic / explicit)
self.idials_runner.make_next = sys_arg.make_next
self.cli_tree_output = TreeShow()
self.cli_tree_output(self.idials_runner)
self.cur_html = None
self.cur_pick = None
self.cur_json = None
self.cur_log = None
self.cur_cmd_name = "None"
main_box = QVBoxLayout()
h_left_splitter = QSplitter()
h_left_splitter.setOrientation(Qt.Horizontal)
self.tree_out = TreeNavWidget()
'''
scroll_area_left = QScrollArea()
scroll_area_left.setWidget(self.tree_out)
h_left_splitter.addWidget(scroll_area_left)
'''
h_left_splitter.addWidget(self.tree_out)
self.centre_widget = CentreWidget()
self.centre_widget.get_arg_obj(sys_arg)
self.run_all = sys_arg.run_all
h_left_splitter.addWidget(self.centre_widget)
v_left_splitter = QSplitter()
v_left_splitter.setOrientation(Qt.Vertical)
v_left_splitter.addWidget(h_left_splitter)
self.info_widget = InfoWidget()
scrollArea = QScrollArea()
scrollArea.setWidget(self.info_widget)
v_left_splitter.addWidget(scrollArea)
h_main_splitter = QSplitter()
h_main_splitter.setOrientation(Qt.Horizontal)
h_main_splitter.addWidget(v_left_splitter)
self.cli_out = CliOutView()
self.web_view = WebTab()
self.img_view = MyImgWin()
self.ext_view = OuterCaller()
self.output_info_tabs = QTabWidget()
self.output_info_tabs.addTab(self.img_view, "Image View")
self.output_info_tabs.addTab(self.cli_out, "Log Text")
self.output_info_tabs.addTab(self.web_view, "Report View")
self.output_info_tabs.addTab(self.ext_view, "Reciprocal Lattice Viewer")
self.view_tab_num = 0
self.output_info_tabs.currentChanged.connect(self.tab_changed)
h_main_splitter.addWidget(self.output_info_tabs)
main_box.addWidget(h_main_splitter)
self.txt_bar = Text_w_Bar()
main_box.addWidget(self.txt_bar)
self.connect_all()
self.custom_thread = CommandThread()
self.custom_thread.finished.connect(self.update_after_finished)
self.custom_thread.str_fail_signal.connect(self.after_failed)
self.custom_thread.str_print_signal.connect(self.cli_out.add_txt)
self.custom_thread.str_print_signal.connect(self.txt_bar.setText)
self.main_widget = QWidget()
self.main_widget.setLayout(main_box)
self.setCentralWidget(self.main_widget)
self.setWindowTitle('CCP4 DUI')
self.setWindowIcon(QIcon(self.centre_widget.dials_logo_path))
self.just_reindexed = False
self.user_stoped = False
self.reconnect_when_ready()