def answer_q10():
"""
generates clusters, figure out distoration and return x & y values
"""
data_sources = [viz.DATA_111_URL, viz.DATA_290_URL, viz.DATA_896_URL]
x_vals = range(6, 21)
y_vals_hier = {}
y_vals_kmean = {}
for idx in range(len(data_sources)):
# 0. Generate data_field & cluster_list
clust_list, data_table = closest_pair.create_cluster_list(
data_sources[idx])
y_vals_hier[idx] = []
# 1. calculate values for hierarchical - decreasing order
for clust_size in reversed(x_vals):
clust_list = closest_pair.hierarchical_clustering(clust_list,
clust_size)
clust_error = closest_pair.compute_distortions(clust_list,
data_table)
y_vals_hier[idx].insert(0, clust_error)
# 2. calculate values for kmeans - decreasing order
y_vals_kmean[idx] = []
for clust_size in x_vals:
clust_list, data_table = closest_pair.create_cluster_list(
data_sources[idx])
clust_list = closest_pair.kmeans_clustering(clust_list,
clust_size, 5)
clust_error = closest_pair.compute_distortions(clust_list,
data_table)
y_vals_kmean[idx].append(clust_error)
return x_vals, y_vals_hier, y_vals_kmean
def run_example():
"""
Load a data table, compute a list of clusters and
plot a list of clusters
Set DESKTOP = True/False to use either matplotlib or simplegui
"""
data_table = load_data_table(DATA_111_URL)
singleton_list = []
for line in data_table:
singleton_list.append(alg_cluster.Cluster(set([line[0]]), line[1], line[2], line[3], line[4]))
# cluster_list = sequential_clustering(singleton_list, 15)
# print "Displaying", len(cluster_list), "sequential clusters"
# cluster_list = alg_project3_solution.hierarchical_clustering(singleton_list, 9)
# print "Displaying", len(cluster_list), "hierarchical clusters"
#
cluster_list = alg_project3_solution.kmeans_clustering(singleton_list, 15, 5)
print "Displaying", len(cluster_list), "k-means clusters"
# draw the clusters using matplotlib or simplegui
if DESKTOP:
alg_clusters_matplotlib.plot_clusters(data_table, cluster_list, True)
# alg_clusters_matplotlib.plot_clusters(data_table, cluster_list, True) #add cluster centers
else:
alg_clusters_simplegui.PlotClusters(data_table, cluster_list) # use toggle in GUI to add cluster centers
def test_q7():
clust_list, data_table = create_cluster_list(URL)
print(closest_pair.compute_distortions(clust_list, data_table))
test1 = closest_pair.hierarchical_clustering(clust_list, 16)
print(closest_pair.compute_distortions(test1, data_table))
clust_list, data_table = create_cluster_list(URL)
test2 = closest_pair.kmeans_clustering(clust_list, 16, 5)
print(closest_pair.compute_distortions(test2, data_table))
""" code to answer question 7 """ import closest_pair import alg_project3_viz URL = alg_project3_viz.DATA_111_URL clust_list, data_table = closest_pair.create_cluster_list(URL) test1 = closest_pair.hierarchical_clustering(clust_list,9) print(closest_pair.compute_distortions(test1, data_table)) clust_list, data_table = closest_pair.create_cluster_list(URL) test2 = closest_pair.kmeans_clustering(clust_list,9,5) print(closest_pair.compute_distortions(test2, data_table))