Python generate_delta_file Exemples

Exemple #1

Fichier : convert_external_genome_test.py Projet : nate-d-olson/NASP

    def test_parse_delta_file(self):
        from nasp_objects import GenomeStatus

        convert_external_genome.generate_delta_file(
            self.nucmer_path, "", self.deltafilter_path, "external", self.reference.name, self.external.name
        )
        dups_data = GenomeStatus()
        convert_external_genome.parse_delta_file(self.delta, dups_data)
        print(dups_data)

Exemple #2

Fichier : convert_external_genome_test.py Projet : nate-d-olson/NASP

 def test_generate_delta_file(self):
     convert_external_genome.generate_delta_file(
         self.nucmer_path, "", self.deltafilter_path, "external", self.reference.name, self.external.name
     )