def main():
try:
odparser = construct_parser_outdir()
odargs, _ = odparser.parse_known_args()
jobmon_parser = construct_parser_jobmon()
jobmon_args, _ = jobmon_parser.parse_known_args()
sj = get_SGEJobInstance(odargs.out_dir, create_connection_config_from_args(jobmon_args))
sj.log_started()
logger = None
location_id = 'unparsed'
start_year = 'unparsed'
end_year = 'unparsed'
parser = get_input_args.construct_parser_pct_change()
args = get_input_args.get_args_pct_change(parser)
location_id = args.location_id
start_year = args.start_year
end_year = args.end_year
logger = logging.getLogger(__name__)
logger.info("Arguments passed to remote_run_pipeline_percentage_change: {}".format(args))
shape = run_pipeline_percentage_change(args)
logger.debug(" shape= {}".format(shape))
sj.log_completed()
except Exception as e:
# Add the exception to the log file, and also report it centrally to the job monitor.
# Do not send to stderr
message = "remote run_pipeline_percentage_change {l} {start}:{end} failed with an uncaught exception: {ex}" \
.format(l=location_id, start=start_year, end=end_year, ex=e)
if logger:
logger.error(message)
else:
stderr(message)
sj.log_error(message)
sj.log_failed()
from dalynator.jobmon_config import create_connection_config_from_args
from dalynator.get_input_args import construct_parser_outdir
from dalynator.get_input_args import construct_parser_jobmon
logger = None
location_id = 'unparsed'
year_id = 'unparsed'
try:
odparser = construct_parser_outdir()
odargs, _ = odparser.parse_known_args()
jobmon_parser = construct_parser_jobmon()
jobmon_args, _ = jobmon_parser.parse_known_args()
sj = get_SGEJobInstance(odargs.out_dir,
create_connection_config_from_args(jobmon_args))
sj.log_started()
parser = get_input_args.construct_args_dalynator()
args = get_input_args.get_args_and_create_dirs(parser)
location_id = args.location_id
year_id = args.year_id
logger = logging.getLogger(__name__)
logger.info(
"Arguments passed to remote_run_pipeline_dalynator: {}".format(args))
pipeline.run_pipeline(args)
sj.log_completed()
except Exception as e: