def main(args):
# --------------------------------------------------------------------------
# DATA
logger.info('-' * 100)
logger.info('Load data files')
train_exs = utils.load_data(args, args.train_file, skip_no_answer=True)
logger.info('Num train examples = %d' % len(train_exs))
dev_exs = utils.load_data(args, args.dev_file)
logger.info('Num dev examples = %d' % len(dev_exs))
# If we are doing offician evals then we need to:
# 1) Load the original text to retrieve spans from offsets.
# 2) Load the (multiple) text answers for each question.
if args.official_eval:
dev_texts = utils.load_text(args.dev_json)
dev_offsets = {ex['id']: ex['offsets'] for ex in dev_exs}
dev_answers = utils.load_answers(args.dev_json)
# --------------------------------------------------------------------------
# MODEL
logger.info('-' * 100)
start_epoch = 0
if args.checkpoint and os.path.isfile(args.model_file + '.checkpoint'):
# Just resume training, no modifications.
logger.info('Found a checkpoint...')
checkpoint_file = args.model_file + '.checkpoint'
model, start_epoch = DocReader.load_checkpoint(checkpoint_file, args)
else:
# Training starts fresh. But the model state is either pretrained or
# newly (randomly) initialized.
if args.pretrained:
logger.info('Using pretrained model...')
model = DocReader.load(args.pretrained, args)
if args.expand_dictionary:
logger.info('Expanding dictionary for new data...')
# Add words in training + dev examples
words = utils.load_words(args, train_exs + dev_exs)
added_words = model.expand_dictionary(words)
# Load pretrained embeddings for added words
if args.embedding_file:
model.load_embeddings(added_words, args.embedding_file)
logger.info('Expanding char dictionary for new data...')
# Add words in training + dev examples
chars = utils.load_chars(args, train_exs + dev_exs)
added_chars = model.expand_char_dictionary(chars)
# Load pretrained embeddings for added words
if args.char_embedding_file:
model.load_char_embeddings(added_chars, args.char_embedding_file)
else:
logger.info('Training model from scratch...')
model = init_from_scratch(args, train_exs, dev_exs)
# Set up partial tuning of embeddings
if args.tune_partial > 0:
logger.info('-' * 100)
logger.info('Counting %d most frequent question words' %
args.tune_partial)
top_words = utils.top_question_words(
args, train_exs, model.word_dict
)
for word in top_words[:5]:
logger.info(word)
logger.info('...')
for word in top_words[-6:-1]:
logger.info(word)
model.tune_embeddings([w[0] for w in top_words])
# Set up optimizer
model.init_optimizer()
# Use the GPU?
if args.cuda:
model.cuda()
# Use multiple GPUs?
if args.parallel:
model.parallelize()
# --------------------------------------------------------------------------
# DATA ITERATORS
# Two datasets: train and dev. If we sort by length it's faster.
logger.info('-' * 100)
logger.info('Make data loaders')
train_dataset = data.ReaderDataset(train_exs, model, single_answer=True)
if args.sort_by_len:
train_sampler = data.SortedBatchSampler(train_dataset.lengths(),
args.batch_size,
shuffle=True)
else:
train_sampler = torch.utils.data.sampler.RandomSampler(train_dataset)
# if args.use_sentence_selector:
# train_batcher = vector.sentence_batchifier(model, single_answer=True)
# batching_function = train_batcher.batchify
# else:
batching_function = vector.batchify
train_loader = torch.utils.data.DataLoader(
train_dataset,
batch_size=args.batch_size,
sampler=train_sampler,
num_workers=args.data_workers,
collate_fn=batching_function,
pin_memory=args.cuda,
)
dev_dataset = data.ReaderDataset(dev_exs, model, single_answer=False)
if args.sort_by_len:
dev_sampler = data.SortedBatchSampler(dev_dataset.lengths(),
args.test_batch_size,
shuffle=False)
else:
dev_sampler = torch.utils.data.sampler.SequentialSampler(dev_dataset)
# if args.use_sentence_selector:
# dev_batcher = vector.sentence_batchifier(model, single_answer=False)
# batching_function = dev_batcher.batchify
# else:
batching_function = vector.batchify
dev_loader = torch.utils.data.DataLoader(
dev_dataset,
batch_size=args.test_batch_size,
sampler=dev_sampler,
num_workers=args.data_workers,
collate_fn=batching_function,
pin_memory=args.cuda,
)
# -------------------------------------------------------------------------
# PRINT CONFIG
logger.info('-' * 100)
logger.info('CONFIG:\n%s' %
json.dumps(vars(args), indent=4, sort_keys=True))
# --------------------------------------------------------------------------
# TRAIN/VALID LOOP
logger.info('-' * 100)
logger.info('Starting training...')
stats = {'timer': utils.Timer(), 'epoch': 0, 'best_valid': 0}
# --------------------------------------------------------------------------
# QUICKLY VALIDATE ON PRETRAINED MODEL
if args.global_mode == "test":
result1 = validate_unofficial(args, dev_loader, model, stats, mode='dev')
result2 = validate_official(args, dev_loader, model, stats,
dev_offsets, dev_texts, dev_answers)
print(result2[args.valid_metric])
print(result1["exact_match"])
validate_adversarial(args, model, stats, mode="dev")
exit(0)
for epoch in range(start_epoch, args.num_epochs):
stats['epoch'] = epoch
# Train
train(args, train_loader, model, stats)
# Validate unofficial (train)
validate_unofficial(args, train_loader, model, stats, mode='train')
# Validate unofficial (dev)
result = validate_unofficial(args, dev_loader, model, stats, mode='dev')
# Validate official
if args.official_eval:
result = validate_official(args, dev_loader, model, stats,
dev_offsets, dev_texts, dev_answers)
# Save best valid
if args.valid_metric is None or args.valid_metric == 'None':
model.save(args.model_file)
elif result[args.valid_metric] > stats['best_valid']:
logger.info('Best valid: %s = %.2f (epoch %d, %d updates)' %
(args.valid_metric, result[args.valid_metric],
stats['epoch'], model.updates))
model.save(args.model_file)
stats['best_valid'] = result[args.valid_metric]
def main(args):
# --------------------------------------------------------
# Data
logger.info('-' * 100)
logger.info('Load data files')
train_exs = utils.load_data(args, args.train_file, skip_no_answer=True)
logger.info('Num train examples = %d' % len(train_exs))
dev_exs = utils.load_data(args, args.dev_file)
logger.info('Num dev examples = %d' % len(dev_exs))
# If we are doing offician evals then we need to:
# 1) Load the original text to retrieve spans from offsets.
# 2) Load the (multiple) text answers for each question.
if args.official_eval:
dev_texts = utils.load_text(args.dev_json)
dev_offsets = {ex['id']: ex['offsets'] for ex in dev_exs}
dev_answers = utils.load_answers(args.dev_json)
# --------------------------------------------------------
# Model
logger.info('-' * 100)
start_epoch = 0
logger.info('Training model from scratch...')
model = init_from_scratch(args, train_exs, dev_exs)
# Set up partial tuning of embeddings
if args.tune_partial > 0:
logger.info('-' * 100)
logger.info('Counting %d most frequent question words' %
args.tune_partial)
top_words = utils.top_question_words(args, train_exs, model.word_dict)
for word in top_words[:5]:
logger.info(word)
logger.info('...')
for word in top_words[-6:-1]:
logger.info(word)
model.tune_embeddings([w[0] for w in top_words])
# Set up optimizer
model.init_optimizer()
# Use the GPU?
if args.cuda:
model.cuda()
# Use multiple GPUs?
if args.parallel:
model.parallelize()
# --------------------------------------------------------------------------
# DATA ITERATORS
# Two datasets: train and dev. If we sort by length it's faster.
logger.info('-' * 100)
logger.info('Make data loaders')
train_dataset = data.ReaderDataset(train_exs, model, single_answer=True)
if args.sort_by_len:
train_sampler = data.SortedBatchSampler(
train_dataset.lengths(), args.batch_size,
shuffle=True) # shuffle设置为true每个batch重新打乱顺序
else:
train_sampler = torch.utils.data.sampler.RandomSampler(train_dataset)
train_loader = torch.utils.data.DataLoader(
train_dataset,
batch_size=args.batch_size, # 每个batch加载多少个样本
sampler=train_sampler, # 从数据集中提取样本的策略，如果指定，则忽略shuffle参数
num_workers=args.data_workers, # 用多少个子进程加载数据
collate_fn=vector.batchify, # 合并样本形成小批量
pin_memory=args.cuda, # 如果为true，那么数据加载器将张量复制到cuda固定的内存中，然后再返回
)
dev_dataset = data.ReaderDataset(dev_exs, model, single_answer=False)
if args.sort_by_len:
dev_sampler = data.SortedBatchSampler(dev_dataset.lengths(),
args.test_batch_size,
shuffle=False)
else:
dev_sampler = torch.utils.data.sampler.SequentialSampler(dev_dataset)
dev_loader = torch.utils.data.DataLoader(
dev_dataset,
batch_size=args.test_batch_size,
sampler=dev_sampler,
num_workers=args.data_workers,
collate_fn=vector.batchify,
pin_memory=args.cuda,
)
# -------------------------------------------------------------------------
# PRINT CONFIG
logger.info('-' * 100)
logger.info('CONFIG:\n%s' %
json.dumps(vars(args), indent=4, sort_keys=True))
# --------------------------------------------------------------------------
# TRAIN/VALID LOOP
logger.info('-' * 100)
logger.info('Starting training...')
stats = {'timer': utils.Timer(), 'epoch': 0, 'best_valid': 0}
for epoch in range(start_epoch, args.num_epochs):
stats['epoch'] = epoch
# train
train(args, train_loader, model, stats)
# Validate unofficial (train)
validate_unofficial(args, train_loader, model, stats, mode='train')
# Validate unofficial (dev)
result = validate_unofficial(args,
dev_loader,
model,
stats,
mode='dev')
# Validate official
if args.official_eval:
result = validate_official(args, dev_loader, model, stats,
dev_offsets, dev_texts, dev_answers)
# Save best valid
if result[args.valid_metric] > stats['best_valid']:
logger.info('Best valid: %s = %.2f (epoch %d, %d updates)' %
(args.valid_metric, result[args.valid_metric],
stats['epoch'], model.updates))
model.save(args.model_file)
stats['best_valid'] = result[args.valid_metric]
def validate_adversarial(args, model, global_stats, mode="dev"):
# create dataloader for dev sets, load thier jsons, integrate the function
for idx, dataset_file in enumerate(args.adv_dev_json):
predictions = {}
logger.info("Validating Adversarial Dataset %s" % dataset_file)
exs = utils.load_data(args, args.adv_dev_file[idx])
logger.info('Num dev examples = %d' % len(exs))
## Create dataloader
dev_dataset = data.ReaderDataset(exs, model, single_answer=False)
if args.sort_by_len:
dev_sampler = data.SortedBatchSampler(dev_dataset.lengths(),
args.test_batch_size,
shuffle=False)
else:
dev_sampler = torch.utils.data.sampler.SequentialSampler(dev_dataset)
# if args.use_sentence_selector:
# batching_function = vector.batchify_sentences
# else:
batching_function = vector.batchify
dev_loader = torch.utils.data.DataLoader(
dev_dataset,
batch_size=args.test_batch_size,
sampler=dev_sampler,
num_workers=args.data_workers,
collate_fn=batching_function,
pin_memory=args.cuda,
)
texts = utils.load_text(dataset_file)
offsets = {ex['id']: ex['offsets'] for ex in exs}
answers = utils.load_answers(dataset_file)
eval_time = utils.Timer()
f1 = utils.AverageMeter()
exact_match = utils.AverageMeter()
examples = 0
bad_examples = 0
for ex in dev_loader:
ex_id, batch_size = ex[-1], ex[0].size(0)
chosen_offset = ex[-2]
pred_s, pred_e, _ = model.predict(ex)
for i in range(batch_size):
if pred_s[i][0] >= len(offsets[ex_id[i]]) or pred_e[i][0] >= len(offsets[ex_id[i]]):
bad_examples += 1
continue
if args.use_sentence_selector:
s_offset = chosen_offset[i][pred_s[i][0]][0]
e_offset = chosen_offset[i][pred_e[i][0]][1]
else:
s_offset = offsets[ex_id[i]][pred_s[i][0]][0]
e_offset = offsets[ex_id[i]][pred_e[i][0]][1]
prediction = texts[ex_id[i]][s_offset:e_offset]
predictions[ex_id[i]] = prediction
ground_truths = answers[ex_id[i]]
exact_match.update(utils.metric_max_over_ground_truths(
utils.exact_match_score, prediction, ground_truths))
f1.update(utils.metric_max_over_ground_truths(
utils.f1_score, prediction, ground_truths))
examples += batch_size
logger.info('dev valid official for dev file %s : Epoch = %d | EM = %.2f | ' %
(dataset_file, global_stats['epoch'], exact_match.avg * 100) +
'F1 = %.2f | examples = %d | valid time = %.2f (s)' %
(f1.avg * 100, examples, eval_time.time()))
orig_f1_score = 0.0
orig_exact_match_score = 0.0
adv_f1_scores = {} # Map from original ID to F1 score
adv_exact_match_scores = {} # Map from original ID to exact match score
adv_ids = {}
all_ids = set() # Set of all original IDs
f1 = exact_match = 0
dataset = json.load(open(dataset_file))['data']
for article in dataset:
for paragraph in article['paragraphs']:
for qa in paragraph['qas']:
orig_id = qa['id'].split('-')[0]
all_ids.add(orig_id)
if qa['id'] not in predictions:
message = 'Unanswered question ' + qa['id'] + ' will receive score 0.'
# logger.info(message)
continue
ground_truths = list(map(lambda x: x['text'], qa['answers']))
prediction = predictions[qa['id']]
cur_exact_match = utils.metric_max_over_ground_truths(utils.exact_match_score,
prediction, ground_truths)
cur_f1 = utils.metric_max_over_ground_truths(utils.f1_score, prediction, ground_truths)
if orig_id == qa['id']:
# This is an original example
orig_f1_score += cur_f1
orig_exact_match_score += cur_exact_match
if orig_id not in adv_f1_scores:
# Haven't seen adversarial example yet, so use original for adversary
adv_ids[orig_id] = orig_id
adv_f1_scores[orig_id] = cur_f1
adv_exact_match_scores[orig_id] = cur_exact_match
else:
# This is an adversarial example
if (orig_id not in adv_f1_scores or adv_ids[orig_id] == orig_id
or adv_f1_scores[orig_id] > cur_f1):
# Always override if currently adversary currently using orig_id
adv_ids[orig_id] = qa['id']
adv_f1_scores[orig_id] = cur_f1
adv_exact_match_scores[orig_id] = cur_exact_match
orig_f1 = 100.0 * orig_f1_score / len(all_ids)
orig_exact_match = 100.0 * orig_exact_match_score / len(all_ids)
adv_exact_match = 100.0 * sum(adv_exact_match_scores.values()) / len(all_ids)
adv_f1 = 100.0 * sum(adv_f1_scores.values()) / len(all_ids)
logger.info("For the file %s Original Exact Match : %.4f ; Original F1 : : %.4f | "
% (dataset_file, orig_exact_match, orig_f1)
+ "Adversarial Exact Match : %.4f ; Adversarial F1 : : %.4f " % (adv_exact_match, adv_f1))
def main(args):
# --------------------------------------------------------------------------
# DATA
logger.info('-' * 100)
logger.info('Load data files')
train_exs = utils.load_data(args, args.train_file, skip_no_answer=True)
logger.info('Num train examples = %d' % len(train_exs))
dev_exs = utils.load_data(args, args.dev_file)
logger.info('Num dev examples = %d' % len(dev_exs))
# If we are doing offician evals then we need to:
# 1) Load the original text to retrieve spans from offsets.
# 2) Load the (multiple) text answers for each question.
if args.official_eval:
dev_texts = utils.load_text(args.dev_json)
dev_offsets = {ex['id']: ex['offsets'] for ex in dev_exs}
dev_answers = utils.load_answers(args.dev_json)
else:
dev_texts = None
dev_offsets = None
dev_answers = None
# --------------------------------------------------------------------------
# MODEL
logger.info('-' * 100)
start_epoch = 0
if args.checkpoint and os.path.isfile(args.model_file + '.checkpoint'):
# Just resume training, no modifications.
logger.info('Found a checkpoint...')
checkpoint_file = args.model_file + '.checkpoint'
model, start_epoch = DocReader.load_checkpoint(checkpoint_file, args)
else:
# Training starts fresh. But the model state is either pretrained or
# newly (randomly) initialized.
if args.pretrained:
logger.info('Using pretrained model...')
model = DocReader.load(args.pretrained, args)
if args.expand_dictionary:
logger.info('Expanding dictionary for new data...')
# Add words in training + dev examples
words = utils.load_words(args, train_exs + dev_exs)
added_words = model.expand_dictionary(words)
# Load pretrained embeddings for added words
if args.embedding_file:
model.load_embeddings(added_words, args.embedding_file)
logger.info('Expanding char dictionary for new data...')
# Add words in training + dev examples
chars = utils.load_chars(args, train_exs + dev_exs)
added_chars = model.expand_char_dictionary(chars)
# Load pretrained embeddings for added words
if args.char_embedding_file:
model.load_char_embeddings(added_chars,
args.char_embedding_file)
else:
logger.info('Training model from scratch...')
model = init_from_scratch(args, train_exs, dev_exs)
# Set up partial tuning of embeddings
if args.tune_partial > 0:
logger.info('-' * 100)
logger.info('Counting %d most frequent question words' %
args.tune_partial)
top_words = utils.top_question_words(args, train_exs,
model.word_dict)
for word in top_words[:5]:
logger.info(word)
logger.info('...')
for word in top_words[-6:-1]:
logger.info(word)
model.tune_embeddings([w[0] for w in top_words])
# Set up optimizer
model.init_optimizer()
# Use the GPU?
if args.cuda:
model.cuda()
# Use multiple GPUs?
if args.parallel:
model.parallelize()
# --------------------------------------------------------------------------
# DATA ITERATORS
# Two datasets: train and dev. If we sort by length it's faster.
logger.info('-' * 100)
logger.info('Make data loaders')
train_dataset = data.ReaderDataset(train_exs, model, single_answer=True)
if args.sort_by_len:
train_sampler = data.SortedBatchSampler(train_dataset.lengths(),
args.batch_size,
shuffle=True)
else:
train_sampler = torch.utils.data.sampler.RandomSampler(train_dataset)
train_loader = torch.utils.data.DataLoader(
train_dataset,
batch_size=args.batch_size,
sampler=train_sampler,
num_workers=args.data_workers,
collate_fn=vector.batchify,
pin_memory=args.cuda,
)
dev_dataset = data.ReaderDataset(dev_exs, model, single_answer=False)
if args.sort_by_len:
dev_sampler = data.SortedBatchSampler(dev_dataset.lengths(),
args.test_batch_size,
shuffle=False)
else:
dev_sampler = torch.utils.data.sampler.SequentialSampler(dev_dataset)
dev_loader = torch.utils.data.DataLoader(
dev_dataset,
batch_size=args.test_batch_size,
sampler=dev_sampler,
num_workers=args.data_workers,
collate_fn=vector.batchify,
pin_memory=args.cuda,
)
# -------------------------------------------------------------------------
# PRINT CONFIG
logger.info('-' * 100)
logger.info('CONFIG:\n%s' %
json.dumps(vars(args), indent=4, sort_keys=True))
# --------------------------------------------------------------------------
# TRAIN/VALID LOOP
logger.info('-' * 100)
logger.info('Starting training...')
stats = {'timer': utils.Timer(), 'epoch': 0, 'best_valid': 0}
model_prefix = os.path.join(args.model_dir, args.model_name)
kept_models = []
best_model_path = ''
for epoch in range(start_epoch, args.num_epochs):
stats['epoch'] = epoch
# Train
train(args, train_loader, model, stats)
# Validate unofficial (train)
logger.info('eval: train split unofficially...')
validate_unofficial(args, train_loader, model, stats, mode='train')
if args.official_eval:
# Validate official (dev)
logger.info('eval: dev split unofficially..')
result = validate_official(args, dev_loader, model, stats,
dev_offsets, dev_texts, dev_answers)
else:
# Validate unofficial (dev)
logger.info(
'train: evaluating dev split evaluating dev official...')
result = validate_unofficial(args,
dev_loader,
model,
stats,
mode='dev')
em = result['exact_match']
f1 = result['f1']
suffix = 'em_{:4.2f}-f1_{:4.2f}.mdl'.format(em, f1)
# Save best valid
model_file = '{}-epoch_{}-{}'.format(model_prefix, epoch, suffix)
if args.valid_metric:
if result[args.valid_metric] > stats['best_valid']:
for f in glob.glob('{}-best*'.format(model_prefix)):
os.remove(f)
logger.info('eval: dev best %s = %.2f (epoch %d, %d updates)' %
(args.valid_metric, result[args.valid_metric],
stats['epoch'], model.updates))
model_file = '{}-best-epoch_{}-{}'.format(
model_prefix, epoch, suffix)
best_model_path = model_file
model.save(model_file)
stats['best_valid'] = result[args.valid_metric]
for f in kept_models:
os.remove(f)
kept_models.clear()
else:
model.save(model_file)
kept_models.append(model_file)
if len(kept_models) >= args.early_stop:
logger.info(
'Finished training due to %s not improved for %d epochs, best model is at: %s'
%
(args.valid_metric, args.early_stop, best_model_path))
return
else:
# just save model every epoch since no validation metric is given
model.save(model_file)