def get_status_group_genome_by_generation(self, status,
target_status, generation):
organisms = database_calls.db_reconstruct_organisms(self.cur,
self.starting_time, self.population_name, generation)
genome_list = [organism.genome
for organism in organisms
if organism.status[status] == target_status]
return genome_list
def get_chromosomes_by_location(starting_time, pop_name, generation):
organisms = database_calls.db_reconstruct_organisms(cur, starting_time, pop_name, generation)
organism_chromosomes = {}
for location in locations:
organism_chromosomes[location] = []
for organism in organisms:
if organism.status['location'] == location:
organism_chromosomes[location].append(organism.genome[0].sequence)
return organism_chromosomes
def get_chromosomes_by_location(starting_time, pop_name, generation):
organisms = database_calls.db_reconstruct_organisms(cur, starting_time, pop_name, generation)
organism_chromosomes = {}
for location in locations:
organism_chromosomes[location] = []
for organism in organisms:
if organism.status['location'] == location:
organism_chromosomes[location].append(organism.genome[0].sequence)
return organism_chromosomes
def get_status_group_genome_by_generation(self, status, target_status,
generation):
organisms = database_calls.db_reconstruct_organisms(
self.cur, self.starting_time, self.population_name, generation)
genome_list = [
organism.genome for organism in organisms
if organism.status[status] == target_status
]
return genome_list
