def index(self):
c.silo_name = ''
c.ident = ''
c.id =""
c.q=""
c.typ=""
c.path =""
c.user_logged_in_name=""
c.src = ag.root
c.host = ag.host
c.message=""
user_name = 'admin'
password = '******'
datastore = HTTPRequest(endpointhost=c.host)
datastore.setRequestUserPass(endpointuser=user_name, endpointpass=password)
(resp, respdata) = datastore.doHTTP_GET(resource="/silos", expect_type="application/JSON")
c.sources = json.loads(respdata)
print c.sources
c.source_infos = {}
for source in c.sources:
(resp, respdata) = datastore.doHTTP_GET(resource='/' + source + '/states', expect_type="application/JSON")
state_info = json.loads(respdata)
c.source_infos[source] = [source, len(state_info['datasets'])]
##print "sourceinfos:"
##print c.source_infos
c.unregistered_sources = []
try:
s_q= meta.Session.query(SourceInfo.silo).filter(SourceInfo.activate == False)
for source in s_q:
c.unregistered_sources.append(source.silo)
print "Unregistered sources"
print c.unregistered_sources
except IntegrityError:
meta.Session.rollback()
return False
return render('/list_of_sources.html')
def sourceinfo(request, source):
# A user needs to be authenticated and authorized to be able to administer the DataFinder
# Test if the user is now a university authenticated user
if 'DF_USER_SSO_ID' not in request.session:
return redirect("/login?redirectPath=admin")
# Test if the user is Data Finder authorised user
if request.session['DF_USER_ROLE'] != "admin" :
return redirect("/")
context = {
#'DF_VERSION':settings.DF_VERSION,
#'STATIC_URL': settings.STATIC_URL,
'silo_name':"",
'ident' : "",
'id':"",
'path' :"",
'q':"",
'src':settings.get("main:granary.uri_root"),
'host':settings.get("main:granary.host"),
'typ':"",
'message':"",
'silo':"",
'source_infos':{},
'header':"",
'activate':"",
'unregistered_sources':[],
'kw':{},
'sourceinfo':SourceInfo(),
'roles':[],
'source':""
}
# if not request.environ.get('repoze.who.identity'):
# abort(401, "Not Authorised")
# if not ag.granary.issilo(silo):
# abort(404)
# ident = request.environ.get('repoze.who.identity')
# c.ident = ident
# c.silo = silo
# silos = ag.authz(ident, permission=['administrator', 'manager'])
# if not silo in silos:
# abort(403, "Do not have administrator or manager credentials for silo %s"%silo)
# user_groups = list_user_groups(ident['user'].user_name)
# if ('*', 'administrator') in user_groups:
# #User is super user
# c.roles = ["admin", "manager", "user"]
# elif (silo, 'administrator') in user_groups:
# c.roles = ["admin", "manager", "user"]
# elif (silo, 'manager') in user_groups:
# c.roles = ["manager", "user"]
# else:
# abort(403, "Do not have administrator or manager credentials for silo %s"%silo)
http_method = request.environ['REQUEST_METHOD']
## hardcoded for now
context['roles'] = ["admin", "manager", "user"]
##c.kw = ag.granary.describe_silo(source)
user_name = 'admin'
password = '******'
datastore = HTTPRequest(endpointhost=context['host'])
datastore.setRequestUserPass(endpointuser=user_name, endpointpass=password)
context['source'] = source
state_info = None
# try:
# c.kw = { 'silo':src.silo,
# 'title':src.title,
# 'description':src.description,
# 'notes':src.notes,
# 'users':src.users,
# 'disk_allocation':src.disk_allocation,
# 'activate':src.activate
# }
# s_q= meta.Session.query(SourceInfo).filter(SourceInfo.silo == c.source).filter(SourceInfo.activate == False)
# s_q.one()
# return render("/admin_sourceview.html")
# except orm.exc.NoResultFound:
# sourceinfo.activate = False
# meta.Session.add(sourceinfo)
# meta.Session.commit()
# pass
# except IntegrityError:
# meta.Session.rollback()
# return False
## If the source is not activated only then get the source information from the registered information area
(resp, respdata) = datastore.doHTTP_GET(resource='/' + source + '/states', expect_type="application/JSON")
state_info = json.loads(respdata)
##print json.loads(respdata)
context['kw']=state_info
print "http_method = "
print http_method
if http_method == "GET":
return render_to_response('admin_sourceinfo.html', context, context_instance=RequestContext(request))
elif http_method == "POST":
##silo = request.REQUEST.get('silo', None)
title = request.REQUEST.get('title', '')
description = request.REQUEST.get('description', '')
notes = request.REQUEST.get('notes', '')
administrators = request.REQUEST.get('administrators', '')
managers = request.REQUEST.get('managers', '')
users = request.REQUEST.get('users', '')
disk_allocation = request.REQUEST.get('disk_allocation', 0)
fields = \
[ ("silo", source),
("title", title),
("description", description),
("notes", notes),
("administrators", administrators),
("managers", managers),
("users", users),
("disk_allocation", disk_allocation)
]
print fields
files =[]
(reqtype, reqdata) = SparqlQueryTestCase.encode_multipart_formdata(fields, files)
(resp,respdata) = datastore.doHTTP_POST(reqdata, reqtype, resource='/' + source + "/admin", expect_type="application/JSON")
resource ='/' + source + "/admin"
print 'respdata', respdata
print 'msg', resp.msg
print 'reason', resp.reason
print 'status',resp.status
print resp.read()
## print "response data for update metadata"
if resp.status== 204 :
context['source'] = source
context['message'] = "Metadata updated"
(resp, respdata) = datastore.doHTTP_GET(resource='/' + source + '/states', expect_type="application/JSON")
state_info = json.loads(respdata)
context['kw']=state_info
print "before reloading"
print state_info
return render_to_response('admin_sourceinfo.html', context, context_instance=RequestContext(request))
else:
context['source'] = source
context['message'] = "Metadata not updated: " + str(resp.status)
print "metadata not updated: " + str(resp.status)
#abort(resp.status, respdata )
return render_to_response('admin_sourceinfo.html', context, context_instance=RequestContext(request))
elif http_method == "DELETE":
##fields = [("silo", source)]
##print fields
##files =[]
##(reqtype, reqdata) = SparqlQueryTestCase.encode_multipart_formdata(fields, files)
##(resp,respdata) = datastore.doHTTP_DELETE(reqdata, reqtype, resource='/' + source + "/admin", expect_type="application/JSON")
(resp,respdata) = datastore.doHTTP_DELETE(resource='/' + source + "/admin")
resource ='/' + source + "/admin"
print resp.read()
print "Response Status = "
print resp.status
if resp.status== 200:
#Modify the source entry in the sqllite database in the data finder. Change activate = False.
try:
s_q = SourceInfo.objects.filter(silo = source)
for src in s_q:
src.activate = False
src.save()
print "after save"
context['message'] = "Metadata deleted"
except Exception, e:
print "Exception" + str(e)
context['message'] = str(e)
else:
context['message'] = "Metadata could not be deleted"
abort(resp.status, respdata )
return render_to_response('list_of_sources.html', context, context_instance=RequestContext(request))
sourceinfo.save()
except SourceInfo.DoesNotExist,e:
context['message']="Sorry, that source doesn't exist."
context['status']="error"
return redirect("/admin?message="+context['message']+"&status="+context['status'])
except Exception,e:
logger.error("Oops, an error occurred, sorry...")
context['message']="Oops, an error occurred, sorry..."
context['status']="error"
return redirect("/admin?"+"message="+context['message']+"&status="+context['status'])
#srcurl = settings.get("main:granary.uri_root") +'/admin'
user_name = settings.get("main:granary.uri_root_name")
password = settings.get("main:granary.uri_root_pass")
datastore = HTTPRequest(endpointhost=settings.get("main:granary.host"))
datastore.setRequestUserPass(endpointuser=user_name, endpointpass=password)
fields = \
[ ("silo", context["source"]),
("title", context["title"]),
("description", context["description"]),
("notes", context["notes"]),
("uri", context["uri"]),
("administrators", settings.get("main:granary.uri_root_name") ),
("managers", settings.get("main:granary.uri_root_name") ),
("users",settings.get("main:granary.uri_root_name") ),
#("disk_allocation", "disk_allocation")
]
files =[]
(reqtype, reqdata) = SparqlQueryTestCase.encode_multipart_formdata(fields, files)
def index(self):
c.silo_name = ''
c.ident = ''
c.id =""
c.path =""
c.user_logged_in_name=""
c.q=""
c.typ=""
c.host=ag.host
print "endpointhost"
print c.host
srcurl = ag.root +'/admin'
silo = request.params.get('silo', "")
title = request.params.get('title', "")
description = request.params.get('description', "")
notes = request.params.get('notes', "")
administrators = request.params.get('administrators', "")
managers = request.params.get('managers', "")
users = request.params.get('users', "")
disk_allocation = request.params.get('disk_allocation', "")
user_name = 'admin'
password = '******'
datastore = HTTPRequest(endpointhost=c.host)
datastore.setRequestUserPass(endpointuser=user_name, endpointpass=password)
fields = \
[ ("silo", silo),
("title", title),
("description", description),
("notes", notes),
("administrators", administrators),
("managers", managers),
("users", users),
("disk_allocation", disk_allocation)
]
print fields
files =[]
(reqtype, reqdata) = SparqlQueryTestCase.encode_multipart_formdata(fields, files)
(resp,respdata) = datastore.doHTTP_POST(reqdata, reqtype, resource="/admin", expect_type="application/JSON")
print 'respdata', respdata
print 'msg', resp.msg
print 'reason', resp.reason
print 'status',resp.status
print resp.read()
## print "response data for update metadata"
if resp.status== 204 or resp.status==201:
c.message = "Source successfully created."
#Modify the source entry in the sqllite database in the data finder. Change activate = True.
try:
s_q= meta.Session.query(SourceInfo).filter(SourceInfo.silo == silo)
s_q.one()
s_q.update({
'title':title,
'description':description,
'notes':notes,
'administrators':administrators,
'managers':managers,
'users':users,
'disk_allocation':disk_allocation,
'activate':True
})
meta.Session.commit()
except orm.exc.NoResultFound:
sourceinfo.activate = True
meta.Session.add(sourceinfo)
meta.Session.commit()
pass
except IntegrityError:
#log.error('Error adding user %s'%user_details['username'])
#print traceback.format_exc()
meta.Session.rollback()
return False
return redirect(url(controller='list_sources', action='index'))
else:
c.message = "Source could not be successfully activated"
c.message = c.message + " status: " + repr(resp.status) + " " + resp.reason
c.kw = { 'silo':silo,
'title':title,
'description':description,
'notes':notes,
'administrators': administrators,
'managers':managers,
'users':users,
'disk_allocation':disk_allocation
}
c.header="approve"
c.activate=None
return render("/create_new_source.html")
def sourceinfo(self, source):
c.silo_name = ''
c.ident = ''
c.id =""
c.path =""
c.user_logged_in_name=""
c.q=""
c.typ=""
c.src = ag.root
# if not request.environ.get('repoze.who.identity'):
# abort(401, "Not Authorised")
# if not ag.granary.issilo(silo):
# abort(404)
# ident = request.environ.get('repoze.who.identity')
# c.ident = ident
# c.silo = silo
# silos = ag.authz(ident, permission=['administrator', 'manager'])
# if not silo in silos:
# abort(403, "Do not have administrator or manager credentials for silo %s"%silo)
# user_groups = list_user_groups(ident['user'].user_name)
# if ('*', 'administrator') in user_groups:
# #User is super user
# c.roles = ["admin", "manager", "user"]
# elif (silo, 'administrator') in user_groups:
# c.roles = ["admin", "manager", "user"]
# elif (silo, 'manager') in user_groups:
# c.roles = ["manager", "user"]
# else:
# abort(403, "Do not have administrator or manager credentials for silo %s"%silo)
http_method = request.environ['REQUEST_METHOD']
## hardcoded for now
c.roles = ["admin", "manager", "user"]
##c.kw = ag.granary.describe_silo(source)
c.host = ag.host
c.silo=""
user_name = 'admin'
password = '******'
datastore = HTTPRequest(endpointhost=c.host)
datastore.setRequestUserPass(endpointuser=user_name, endpointpass=password)
c.source = source
c.message =""
state_info = None
print "source requested: "
print c.source
c.kw={}
# try:
# c.kw = { 'silo':src.silo,
# 'title':src.title,
# 'description':src.description,
# 'notes':src.notes,
# 'users':src.users,
# 'disk_allocation':src.disk_allocation,
# 'activate':src.activate
# }
# s_q= meta.Session.query(SourceInfo).filter(SourceInfo.silo == c.source).filter(SourceInfo.activate == False)
# s_q.one()
# return render("/admin_sourceview.html")
# except orm.exc.NoResultFound:
# sourceinfo.activate = False
# meta.Session.add(sourceinfo)
# meta.Session.commit()
# pass
# except IntegrityError:
# meta.Session.rollback()
# return False
## If the source is not activated only then get the source information from the registered information area
(resp, respdata) = datastore.doHTTP_GET(resource='/' + c.source + '/states', expect_type="application/JSON")
state_info = json.loads(respdata)
##print json.loads(respdata)
c.kw=state_info
print "http_method = "
print http_method
if http_method == "GET":
return render("/admin_sourceinfo.html")
elif http_method == "POST":
##silo = request.params.get('silo', None)
title = request.params.get('title', '')
description = request.params.get('description', '')
notes = request.params.get('notes', '')
administrators = request.params.get('administrators', '')
managers = request.params.get('managers', '')
users = request.params.get('users', '')
disk_allocation = request.params.get('disk_allocation', '')
fields = \
[ ("silo", source),
("title", title),
("description", description),
("notes", notes),
("administrators", administrators),
("managers", managers),
("users", users),
("disk_allocation", disk_allocation)
]
print fields
files =[]
(reqtype, reqdata) = SparqlQueryTestCase.encode_multipart_formdata(fields, files)
(resp,respdata) = datastore.doHTTP_POST(reqdata, reqtype, resource='/' + source + "/admin", expect_type="application/JSON")
resource ='/' + source + "/admin"
print 'respdata', respdata
print 'msg', resp.msg
print 'reason', resp.reason
print 'status',resp.status
print resp.read()
## print "response data for update metadata"
if resp.status== 204:
c.message = "Metadata updated"
return render("/admin_sourceinfo.html")
else:
abort(resp.status, respdata )
elif http_method == "DELETE":
##fields = [("silo", source)]
##print fields
##files =[]
(reqtype, reqdata) = SparqlQueryTestCase.encode_multipart_formdata(fields, files)
##(resp,respdata) = datastore.doHTTP_DELETE(reqdata, reqtype, resource='/' + source + "/admin", expect_type="application/JSON")
(resp,respdata) = datastore.doHTTP_DELETE(resource='/' + source + "/admin")
resource ='/' + source + "/admin"
print resp.read()
print "Response Status = "
print resp.status
if resp.status== 200:
#Modify the source entry in the sqllite database in the data finder. Change activate = False.
try:
s_q= meta.Session.query(SourceInfo).filter(SourceInfo.silo == source)
s_q.one()
s_q.update({
'title':title,
'description':description,
'notes':notes,
'administrators':administrators,
'managers':managers,
'users':users,
'disk_allocation':disk_allocation,
'activate':False
})
meta.Session.commit()
except orm.exc.NoResultFound:
sourceinfo.activate = False
meta.Session.add(sourceinfo)
meta.Session.commit()
pass
except IntegrityError:
#log.error('Error adding user %s'%user_details['username'])
#print traceback.format_exc()
meta.Session.rollback()
return False
c.message = "Metadata deleted"
return True
else:
print "Failure"
abort(resp.status, respdata )
def contribute(request):
try:
# A user needs to be authenticated to be able to contribute a record the DataFinder
# Test if the user is now a university authenticated user
if 'DF_USER_SSO_ID' not in request.session:
return redirect("/login?redirectPath=contribute")
context = {}
literals = {}
resources = {}
project = {}
person = {}
if request.GET.has_key('message'):
context["message"]=request.GET['message']
if request.GET.has_key('status'):
context["status"]=request.GET['status']
http_method = request.environ['REQUEST_METHOD']
referrer = request.environ['HTTP_REFERER']
if http_method == "GET":
if request.GET.has_key('id'):
context['id'] = request.GET['id']
context['referrer'] = referrer
query = 'id:"' + request.GET['id'] + '"'
solr_query = SolrQuery(q=query)
context['solr_response'] = solr_query.get_solrresponse()
#context['docs'] = context['solr_response'].get('docs',None)
return render_to_response('contribute.html', context, context_instance=RequestContext(request))
elif http_method == "POST":
if request.POST.has_key('record_title'):
BASE = settings.get("main:manifest.about")
identifier = request.POST['record_title']
subject = URIRef(BASE+identifier)
literals[DCTERMS['title']]=request.POST['record_title']
literals[DCTERMS['alternative']]=request.POST['alt_title']
literals[DCTERMS['description']]=request.POST['data_description']
project[DCTERMS['title']]=request.POST['project_name']
project[DCTERMS['description']]=request.POST['project_desc']
project[DCTERMS['URI']]=request.POST['project_website']
subjects = request.POST.getlist('subject_area')
#for subj in subjects:
literals[DCTERMS['subject']]= subjects
keywords = request.POST.getlist('record_keyword')
#for keyword in keywords:
literals[DCTERMS['keywords']]=keywords
literals[DCTERMS['language']]=request.POST['main_language']
if request.POST.has_key('ChangeRecordStatus'):
literals[DCTERMS['status']]=request.POST['ChangeRecordStatus']
else:
literals[DCTERMS['status']]='AwaitingReview'
literals[OXDS['depositor']] = request.session['DF_USER_SSO_ID']
i = 1
while True:
if request.GET.has_key('author_firstname_' + str(i)):
person_title = request.POST['author_firstname_' + str(i)] + '-' +request.POST['author_middlename_' + str(i)] + '-' +request.POST['author_lastname_' + str(i)]
person[FOAF["givenName"]]=request.POST['author_firstname_' + str(i)]
person[FOAF["middleName"]]=request.POST['author_middlename_' + str(i)]
person[OXDS["DisplayEmail"]]=request.POST['author_middlename_check_' + str(i)]
person[FOAF["familyName"]]=request.POST['author_lastname_' + str(i)]
person[FOAF["mbox"]]=request.POST['author_email_' + str(i)]
person[OXDS['role']]=request.POST['author_role_' + str(i)]
author_member_of_oxford = request.POST['author_mof_' + str(i)]
person[FOAF["Organization"]]=request.POST['author_institution_' + str(i)]
if author_member_of_oxford == True:
person[OXDS["Faculty"]]=request.POST['author_faculty_' + str(i)]
person[OXDS["OxfordCollege"]]=request.POST['author_oxfordcollege_'+ str(i)]
person[OXDS["scheme"]]=request.POST['author_scheme_' + str(i)]
person[OXDS["AUTHOR_ID"]]=request.POST['author_id_' + str(i)]
else:
person[OXDS["Faculty"]]=request.POST['author_faculty_text_' + str(i)]
people_path = settings.get("main:granary.people_path")
people_manifest_filename = os.path.join(people_path, 'people.rdf')
people_manifest = bind_namespaces(rdflib.ConjunctiveGraph())
try:
with open(people_manifest_filename, 'r') as f:
people_manifest.parse(f, base=people_manifest_filename)
except IOError, e:
pass
if people_manifest.value(FOAF[person_title], None, None) == None:
people_manifest.add((FOAF[person_title], RDF.type, FOAF.Person))
for key, value in person.items():
people_manifest.add((FOAF[person_title], key, Literal(value)))
with open(people_manifest_filename, 'w') as f:
people_manifest.serialize(f, 'better-pretty-xml', base=people_manifest_filename)
os.chown(people_manifest_filename, getpwnam('www-data').pw_uid, getpwnam('www-data').pw_gid)
i = i + 1
else:
break
#literals[OXDS['contact']] = request.POST['record_contact']
#Save the contact details
person_or_role = request.POST['person_or_role']
person_title=""
if person_or_role == "is_role":
person_title = request.POST['record_title']
else:
person_title = request.POST['contact_firstname'] + '-' +request.POST['contact_middlename'] + '-' +request.POST['contact_lastname']
person[FOAF["givenName"]]=request.POST['contact_firstname']
person[FOAF["middleName"]]=request.POST['contact_middlename']
if request.GET.has_key('contact_middlename_check'):
person[OXDS["DisplayEmail"]]=request.POST['contact_middlename_check']
person[FOAF["familyName"]]=request.POST['contact_lastname']
person[FOAF["mbox"]]=request.POST['contact_email']
person[OXDS['role']]=request.POST['contact_role']
member_of_oxford = request.POST['contact_mof']
person[FOAF["Organization"]]=request.POST['contact_institution']
if member_of_oxford == True:
person[OXDS["Faculty"]]=request.POST['contact_faculty']
person[OXDS["OxfordCollege"]]=request.POST['contact_oxfordcollege']
person[OXDS["scheme"]]=request.POST['contact_scheme']
person[OXDS["AUTHOR_ID"]]=request.POST['contact_id']
else:
person[OXDS["Faculty"]]=request.POST['contact_faculty_text']
people_path = settings.get("main:granary.people_path")
people_manifest_filename = os.path.join(people_path, 'people.rdf')
people_manifest = bind_namespaces(rdflib.ConjunctiveGraph())
try:
with open(people_manifest_filename, 'r') as f:
people_manifest.parse(f, base=people_manifest_filename)
except IOError, e:
pass
if people_manifest.value(FOAF[person_title], None, None) == None:
people_manifest.add((FOAF[person_title], RDF.type, FOAF.Person))
for key, value in person.items():
people_manifest.add((FOAF[person_title], key, Literal(value)))
with open(people_manifest_filename, 'w') as f:
people_manifest.serialize(f, 'better-pretty-xml', base=people_manifest_filename)
os.chown(people_manifest_filename, getpwnam('www-data').pw_uid, getpwnam('www-data').pw_gid)
#end of saving contact details
#literals[OXDS['isEmbargoed']] = 'False'
if request.POST.has_key('data-format'):
literals[OXDS['isDigital']]=request.POST['data-format']
literals[OXDS['loc-format']]=request.POST['loc-format']
if request.POST['loc-format'] =="URL":
resources[OXDS['DataLocation']]=request.POST['data_location']
else:
literals[OXDS['DataLocation']]=request.POST['data_location']
if request.POST['doc-format'] =="URL":
resources[OXDS['methodology']]=request.POST['digital_publisher_doc']
else:
literals[OXDS['methodology']]=request.POST['digital_publisher_doc']
literals[DCTERMS['publisher']]=request.POST['publisher']
literals[DCTERMS['issued']]=request.POST['publication_year']
literals[OXDS['temporal_choice']]=request.POST['temporal_choice']
if request.POST['temporal_choice'] == 'single_date':
literals[OXDS['dataTemporalCoverage']]=request.POST['single_temporal_date']
if request.POST['temporal_choice'] == 'date_range':
literals[OXDS['dataCoverageStart']]=request.POST['start_date_range']
literals[OXDS['dataCoverageEnd']]=request.POST['end_date_range']
literals[OXDS['data_collected_temporal_choice']]=request.POST['data_collected_temporal_choice']
if request.POST['data_collected_temporal_choice'] == 'data_collected_single_date':
literals[OXDS['dataCollectedCoverage']]=request.POST['data_collected_single_temporal_date']
if request.POST['data_collected_temporal_choice'] == 'data_collected_date_range':
literals[OXDS['dataCollectedStart']]=request.POST['data_collected_start_date_range']
literals[OXDS['dataCollectedEnd']]=request.POST['data_collected_end_date_range']
literals[DCTERMS['Location']]=request.POST['geo_location']
literals[GEO['lat']]=request.POST['lat']
literals[GEO['lng']]=request.POST['lng']
if literals[OXDS['isDigital']] == "yes":
literals[BIBO['doi']]=request.POST['digital_object_identifier']
literals[DCTERMS['type']]=request.POST['digital_resource_type']
literals[OXDS['Filesize']]=request.POST['digital_filesize']
literals[DCTERMS['format']]=request.POST['digital_format']
literals[OXDS['currentVersion']]=request.POST['digital_version']
funded_research = request.POST['funded_research']
literals[OXDS['funded_research']]=request.POST['funded_research']
if funded_research == "yes":
funding_agencies = request.POST.getlist('funding_agency')
literals[FUND['FundingBody']]=funding_agencies
grant_numbers = request.POST.getlist('grant_number')
literals[FUND['grantNumber']]=grant_numbers
#
#if request.POST['dmp_loc'] =="URL":
# resources[OXDS['data_management_plan_location']]=request.POST['data_management_plan_location']
#else:
# literals[OXDS['data_management_plan_location']]=request.POST['data_management_plan_location']
#context["publication_relationship_of_data_1"]=request.GET['publication_relationship_of_data_1']
#context["related_publication_url_1"]=request.GET['related_publication_url_1']
#context["dataset_relationship_of_data_1"]=request.GET['dataset_relationship_of_data_1']
#context["dataset_related_url_1"]=request.GET['dataset_related_url_1']
#context["deposit_data_file_upload"]=request.POST['deposit_data_file_upload']
#context["deposit_data_embargo_options"]=request.POST['deposit_data_embargo_options']
#context["deposit_data_embrago_release_date"]=request.POST['deposit_data_embrago_release_date']
#context["deposit_data_embargo_options_type"]=request.POST['deposit_data_embargo_options_type']
#context["deposit_data_embargo_reason"]=request.POST['deposit_data_embargo_reason']
literals[DCTERMS['rights']]=request.POST['terms_and_conditions']
#resources[OXDS['DataLocation']]=request.POST['data_location']
#prepared_licence - urls to licenses stored elsewhere
#select_a_licence - urls of licens selted fromt he select dropdown
#bespoke_licence - license pasted in as free text
#other_licence - eg: none ie. when not associated with any license
license = request.POST['license_radio']
literals[OXDS['license_radio']]=license
if license =="prepared_licence" or license == 'select_a_licence':
resources[DCTERMS['license']]=request.POST['data_standard_licence_URI']
else :
literals[DCTERMS['license']]=request.POST['data_standard_licence_text']
if request.POST.has_key('embargo_options'):
embargo_options = request.POST['embargo_options']
# embargo_options_list = ['embargo_status_unknown','embargoed_indefinitely']
literals[OXDS['embargoedUntil']]=request.POST['embargo_end_date']
#context["embargo-options"]=request.GET['embargo-options']
#context["subject_specific_metadata_file"]=request.GET['subject_specific_metadata_file']
#context["xml_schema_type"]=request.GET['xml_schema_type']
# Project RDF
#projects_package = rdflib.URIRef(projects_path)
projects_path = settings.get("main:granary.projects_path")
projects_manifest_filename = os.path.join(projects_path, 'projects.rdf')
projects_manifest = bind_namespaces(rdflib.ConjunctiveGraph())
#
try:
with open(projects_manifest_filename, 'r') as f:
projects_manifest.parse(f, base=projects_manifest_filename)
except IOError, e:
pass
for key, value in project.items():
# Will raise UniquenessError if >1 value returned, must be one or None
if projects_manifest.value(None, DCTERMS['title'], Literal(value)) == None:
projects_manifest.add((FUND[project[DCTERMS['title']]], key, Literal(value)))
with open(projects_manifest_filename, 'w') as f:
projects_manifest.serialize(f, 'better-pretty-xml', base=projects_manifest_filename)
os.chown(projects_manifest_filename, getpwnam('www-data').pw_uid, getpwnam('www-data').pw_gid)
resources[FUND['project']] = FUND[project[DCTERMS['title']]]
# Record Manifest RDF
records_path = settings.get("main:granary.records_path")
records_package = rdflib.URIRef(records_path)
#manifest_name = 'df_manifest_'+literals[DCTERMS['title']] +'.rdf'
df_manifest_name = 'df_manifest.rdf'
manifest_filename = os.path.join(records_path, df_manifest_name)
main_manifest_filename = os.path.join(records_path, 'manifest.rdf')
manifest = bind_namespaces(rdflib.ConjunctiveGraph())
#try:
# with open(manifest_filename, 'w') as f:
# manifest.parse(f, base=manifest_filename)
#except IOError, e:
# pass
#for x in list(literals.keys()):
# if literals[x] == "":
# del literals[x]
keys_with_valuelist = [ DCTERMS['subject'],DCTERMS['keywords'], FUND['FundingBody'],FUND['grantNumber'] ]
for key, values in literals.items():
if key in keys_with_valuelist:
for value in values:
manifest.add((subject, key, Literal(value)))
else:
manifest.add((subject, key, Literal(values)))
for key, res_uri in resources.items():
manifest.add((subject, key, res_uri))
with open(manifest_filename, 'w') as f:
manifest.serialize(f, 'better-pretty-xml', base=manifest_filename)
# try:
# with open(main_manifest_filename, 'w') as f:
# manifest.parse(f, base=main_manifest_filename)
# except IOError, e:
# pass
user_name = settings.get("main:granary.uri_root_name")
password = settings.get("main:granary.uri_root_pass")
datastore = HTTPRequest(endpointhost=settings.get("main:granary.host"))
datastore.setRequestUserPass(endpointuser=user_name, endpointpass=password)
#(reqtype, reqdata) = SparqlQueryTestCase.encode_multipart_formdata([], [])
# Create a dataset
#(resp,respdata) = datastore.doHTTP_POST(reqdata, reqtype, resource="/DataFinder/datasets/" + identifier)
#Submit the df_manefest as a file
fields=[]
df_manifest = open(manifest_filename).read()
files = [("file", df_manifest_name, df_manifest, "application/rdf+xml")]
(reqtype, reqdata) = SparqlQueryTestCase.encode_multipart_formdata(fields, files)
(resp,respdata) = datastore.doHTTP_POST(reqdata, reqtype, resource="/DataFinder/datasets/" + identifier +"/")
silo = settings.get("main:mainsilo")
#solr_conn, b = settings.getSolrConnection()
b = BroadcastToRedis('localhost', 'silochanges')
b.creation(silo, identifier, ident=request.session['DF_USER_SSO_ID'])
#Submit the main manifest file which as the see also
fields=[]
main_manifest = open(main_manifest_filename).read()
files = [("file", "manifest.rdf", main_manifest, "application/rdf+xml")]
(reqtype, reqdata) = SparqlQueryTestCase.encode_multipart_formdata(fields, files)
(resp,respdata) = datastore.doHTTP_POST(reqdata, reqtype, resource="/DataFinder/datasets/" + identifier +"/")
os.chown(manifest_filename, getpwnam('www-data').pw_uid, getpwnam('www-data').pw_gid)
return render_to_response('contribute.html', context, context_instance=RequestContext(request))
