def main(args):
logging.info(" ========> filter_fastafile.py")
logging.info("ARGS %s" % args)
ff = FastaFile(args.fastafile)
filterstr = args.str
seqs = []
seq = ff.nextSeq()
while seq is not None:
seqs.append(seq)
seq = ff.nextSeq()
newseqs = FastaFilter.filterById(seqs, args.str)
print FastaFile.toString(newseqs)
import re
import os
import sys
import unittest
from datamodel.factory.FastaFile import FastaFile
import importlib
ff = FastaFile(sys.argv[1])
id = sys.argv[2]
seq = ff.nextSeq()
while seq is not None:
if seq['id'] == id:
str = FastaFile.toString([seq])
print str
exit()
seq = ff.nextSeq()