def setUp(self):
self.test_util = TestUtils()
self.source = CTD('rdf_graph', True)
self.source.graph = RDFGraph(True)
self.test_row = [
'Nicotine', 'D009538', '', 'TOBACCO ADDICTION, SUSCEPTIBILITY TO',
'OMIM:188890', 'therapeutic', '', '', '', '12345|56789'
]
return
def setUp(self):
self.graph = Graph()
self.curie_map = curie_map.get()
self.ctd = CTD('rdf_graph', True)
self.ctd.g = self.ctd.graph
row1 = [
'06-Paris-LA-66 protocol', 'C046983', 'foo',
'Precursor Cell Lymphoblastic Leukemia-Lymphoma', 'MESH:D054198',
'therapeutic', 'bar', 'baz', 'foo', '4519131'
]
row2 = [
'10,10-bis(4-pyridinylmethyl)-9(10H)-anthracenone', 'C112297',
'foo', 'Hyperkinesis', 'MESH:D006948', 'marker/mechanism', 'bar',
'baz', 'foo', '19098162'
]
self.ctd._process_interactions(row1)
self.ctd._process_interactions(row2)
def setUp(self):
self.source = CTD('rdf_graph', True)
self.source.settestonly(True)
self._setDirToSource()
return
