def main():
story_limit = 150
epoch_batches_count = 64
epochs_count = 1024
lr = 1e-11
optim = 1
starting_epoch = -1
bs = 32
pgd = PreGenData(bs)
task_dir = os.path.dirname(abspath(__file__))
processed_data_dir = join(task_dir, 'data', "processed")
lexicon_dictionary = pickle.load(
open(join(processed_data_dir, 'lexicon-dict.pkl'), 'rb'))
x = len(lexicon_dictionary)
computer = DNC(x=x, v_t=x, bs=bs, W=64, L=64, R=32, h=256)
# if load model
# computer, optim, starting_epoch = load_model(computer)
computer = computer.cuda()
if optim is None:
optimizer = torch.optim.Adam(computer.parameters(), lr=lr)
else:
print('use Adadelta optimizer with learning rate ', lr)
optimizer = torch.optim.Adadelta(computer.parameters(), lr=lr)
# starting with the epoch after the loaded one
train(computer, optimizer, story_limit, bs, pgd, x,
int(starting_epoch) + 1, epochs_count, epoch_batches_count)
def test_rnn_no_memory_pass():
T.manual_seed(1111)
input_size = 100
hidden_size = 100
rnn_type = 'gru'
num_layers = 3
num_hidden_layers = 5
dropout = 0.2
nr_cells = 12
cell_size = 17
read_heads = 3
gpu_id = -1
debug = True
lr = 0.001
sequence_max_length = 10
batch_size = 10
cuda = gpu_id
clip = 20
length = 13
rnn = DNC(input_size=input_size,
hidden_size=hidden_size,
rnn_type=rnn_type,
num_layers=num_layers,
num_hidden_layers=num_hidden_layers,
dropout=dropout,
nr_cells=nr_cells,
cell_size=cell_size,
read_heads=read_heads,
gpu_id=gpu_id,
debug=debug)
optimizer = optim.Adam(rnn.parameters(), lr=lr)
optimizer.zero_grad()
input_data, target_output = generate_data(batch_size, length, input_size,
cuda)
target_output = target_output.transpose(0, 1).contiguous()
(chx, mhx, rv) = (None, None, None)
outputs = []
for x in range(6):
output, (chx, mhx, rv), v = rnn(input_data, (chx, mhx, rv),
pass_through_memory=False)
output = output.transpose(0, 1)
outputs.append(output)
output = functools.reduce(lambda x, y: x + y, outputs)
loss = criterion((output), target_output)
loss.backward()
T.nn.utils.clip_grad_norm(rnn.parameters(), clip)
optimizer.step()
assert target_output.size() == T.Size([27, 10, 100])
assert chx[0].size() == T.Size([num_hidden_layers, 10, 100])
assert mhx['memory'].size() == T.Size([10, 12, 17])
assert rv == None
def test_rnn_n():
T.manual_seed(1111)
input_size = 100
hidden_size = 100
rnn_type = 'rnn'
num_layers = 3
num_hidden_layers = 5
dropout = 0.2
nr_cells = 12
cell_size = 17
read_heads = 3
gpu_id = -1
debug = True
lr = 0.001
sequence_max_length = 10
batch_size = 10
cuda = gpu_id
clip = 20
length = 13
rnn = DNC(
input_size=input_size,
hidden_size=hidden_size,
rnn_type=rnn_type,
num_layers=num_layers,
num_hidden_layers=num_hidden_layers,
dropout=dropout,
nr_cells=nr_cells,
cell_size=cell_size,
read_heads=read_heads,
gpu_id=gpu_id,
debug=debug
)
optimizer = optim.Adam(rnn.parameters(), lr=lr)
optimizer.zero_grad()
input_data, target_output = generate_data(batch_size, length, input_size, cuda)
target_output = target_output.transpose(0, 1).contiguous()
output, (chx, mhx, rv), v = rnn(input_data, None)
output = output.transpose(0, 1)
loss = criterion((output), target_output)
loss.backward()
T.nn.utils.clip_grad_norm(rnn.parameters(), clip)
optimizer.step()
assert target_output.size() == T.Size([27, 10, 100])
assert chx[1].size() == T.Size([num_hidden_layers,10,100])
assert mhx['memory'].size() == T.Size([10,12,17])
assert rv.size() == T.Size([10, 51])
def _build_encoder_cell(self,
hparams,
num_layers,
num_residual_layers,
base_gpu=0):
"""Build a multi-layer RNN cell that can be used by encoder."""
if hparams.model == 'model3':
if hparams.mann == 'ntm':
return NTMCell(hparams.num_layers,
hparams.num_units,
use_att_memory=False,
att_memory=False,
att_memory_size=None,
att_memory_vector_dim=None,
use_ext_memory=True,
ext_memory_size=hparams.num_memory_locations,
ext_memory_vector_dim=hparams.memory_unit_size,
ext_read_head_num=hparams.read_heads,
ext_write_head_num=hparams.write_heads,
dropout=hparams.dropout,
batch_size=hparams.batch_size,
mode=self.mode,
shift_range=1,
output_dim=hparams.num_units,
reuse=False,
record_w_history=hparams.record_w_history)
elif hparams.mann == 'dnc':
access_config = {
'memory_size': hparams.num_memory_locations,
'word_size': hparams.memory_unit_size,
'num_reads': hparams.read_heads,
'num_writes': hparams.write_heads
}
controller_config = {
'num_units': hparams.num_units,
'num_layers': hparams.num_layers
}
return DNC(access_config, controller_config, hparams.num_units,
20, hparams.dropout, self.mode, hparams.batch_size)
else:
return model_helper.create_rnn_cell(
unit_type=hparams.unit_type,
num_units=hparams.num_units,
num_layers=num_layers,
num_residual_layers=num_residual_layers,
forget_bias=hparams.forget_bias,
dropout=hparams.dropout,
num_gpus=hparams.num_gpus,
mode=self.mode,
base_gpu=base_gpu,
single_cell_fn=self.single_cell_fn,
num_proj=None)
def main(): # Set random seed if given torch.manual_seed(RANDOM_SEED or torch.initial_seed()) # Choose dataset and initialize size of data's input and output dataset = RepeatCopy() # default parameters # Initialize DNC dnc = DNC(dataset.input_size, dataset.output_size, controller_config, memory_config) train(dnc, dataset)
def __init__(self, idim, cdim, num_heads, N, M, gpu):
super(EncoderDNC, self).__init__()
self.idim = idim
self.hdim = idim
self.rnn = DNC(input_size=idim,
hidden_size=cdim,
nr_cells=N,
cell_size=M,
read_heads=num_heads,
batch_first=False,
gpu_id=gpu)
def __init__(self, gpu_id=0, input_size=1, output_size=1, num_layers=4, hidden_size=128, rnn_type='gru', rnn_num_layers=2, rnn_hidden_size=128): super(ConflictMonitoringNet, self).__init__() self.gpu_id = gpu_id self.input_size = input_size self.output_size = output_size self.num_layers = num_layers self.hidden_size = hidden_size self.rnn_type = rnn_type self.rnn_num_layers = rnn_num_layers self.rnn_hidden_size = rnn_hidden_size self.cmd_regulariser = 0 self.layers = nn.Sequential( CMDrop(nn.Conv1d( input_size, hidden_size, 1), nn.ReLU()), CMDrop(nn.Conv1d( hidden_size, hidden_size, 1), nn.ReLU()), CMDrop(nn.Conv1d( hidden_size, hidden_size, 1), nn.ReLU()), CMDrop(nn.Conv1d( hidden_size, output_size, 1)) ) if self.rnn_type =='gru': self.rnn = nn.GRU( input_size=output_size, hidden_size=rnn_hidden_size, num_layers=rnn_num_layers, batch_first=True) self.rnn_hidden = None elif self.rnn_type == 'dnc': self.rnn = DNC( input_size=output_size, hidden_size=rnn_hidden_size, rnn_type='gru', num_layers=rnn_num_layers, nr_cells=10, cell_size=64, read_heads=4, batch_first=True, gpu_id=self.gpu_id) self.rnn_hidden = (controller_hidden, memory, read_vectors) = (None, None, None) self.rnn_output_layer = nn.Conv1d(rnn_hidden_size, num_layers, 1)
def __init__(self, vocab_size, emb_dim=64, device=torch.device('cpu:0')):
super(DMNC, self).__init__()
K = len(vocab_size)
self.K = K
self.vocab_size = vocab_size
self.device = device
self.token_start = vocab_size[2]
self.token_end = vocab_size[2] + 1
self.embeddings = nn.ModuleList([
nn.Embedding(vocab_size[i] if i != 2 else vocab_size[2] + 2,
emb_dim) for i in range(K)
])
self.dropout = nn.Dropout(p=0.5)
self.encoders = nn.ModuleList([
DNC(input_size=emb_dim,
hidden_size=emb_dim,
rnn_type='gru',
num_layers=1,
num_hidden_layers=1,
nr_cells=16,
cell_size=emb_dim,
read_heads=1,
batch_first=True,
gpu_id=0,
independent_linears=False) for _ in range(K - 1)
])
self.decoder = nn.GRU(
emb_dim + emb_dim * 2, emb_dim * 2,
batch_first=True) # input: (y, r1, r2,) hidden: (hidden1, hidden2)
self.interface_weighting = nn.Linear(
emb_dim * 2, 2 * (emb_dim + 1 + 3)) # 2 read head (key, str, mode)
self.decoder_r2o = nn.Linear(2 * emb_dim, emb_dim * 2)
self.output = nn.Linear(emb_dim * 2, vocab_size[2] + 2)
def __init__(self, batch_size, input_seq_length, output_seq_length):
self._encoder_inputs = [
tf.placeholder(tf.float32,
shape=[batch_size, data_point_dim],
name='inputs_{}'.format(i))
for i in xrange(input_seq_length)
]
self._labels = [
tf.placeholder(tf.float32,
shape=[batch_size, data_point_dim],
name='labels_{}'.format(i))
for i in xrange(output_seq_length)
]
self._decoder_inputs = [
tf.zeros_like(self._encoder_inputs[0], dtype=tf.float32, name='GO')
] + self._labels[:-1]
rnn_cell = DNC(access_config, controller_config, data_point_dim,
clip_value)
model_outputs, states = legacy_seq2seq.tied_rnn_seq2seq(
self._encoder_inputs,
self._decoder_inputs,
rnn_cell,
loop_function=lambda prev, _: prev)
self._batch_size = batch_size
self._input_seq_length = input_seq_length
self._output_seq_length = output_seq_length
self._squashed_output = tf.nn.softmax(model_outputs)
self._cost = loss_function(tf.reshape(self._squashed_output, [-1]),
tf.reshape(self._labels, [-1]))
self._step = tf.train.AdamOptimizer(learning_rate=0.001).minimize(
self._cost)
self._session = tf.Session()
init = tf.global_variables_initializer()
self._session.run(init)
from tasks import CopyTask, RepeatCopyTask, AndTask, XorTask, MergeTask
from utils import *
INPUT_SIZE = 8
BATCH_SIZE = 32
memory = Memory(25, 6)
memory.add_head(NTMReadHead, shifts=[-1, 0, 1])
memory.add_head(NTMReadHead, shifts=[-1, 0, 1])
memory.add_head(NTMWriteHead, shifts=[-1, 0, 1])
input = tf.placeholder(tf.float32, shape=(None, None, INPUT_SIZE+2))
#lstm = tf.nn.rnn_cell.MultiRNNCell([LSTMCell(256) for i in range(3)])
lstm = LSTMCell(100)
net = DNC(input, memory, INPUT_SIZE+2, controller = lstm, log_memory=True)
targets = tf.placeholder(dtype=tf.float32, shape=[None, None, INPUT_SIZE+2])
mask = tf.placeholder(dtype=tf.float32, shape=[None, None, INPUT_SIZE+2])
output = net[0]
loss = tf.losses.sigmoid_cross_entropy(logits=output, weights=mask, multi_class_labels=targets)
cost = tf.reduce_sum( mask*((1 - targets * (1 - tf.exp(-output))) * tf.sigmoid(output)) ) / BATCH_SIZE
opt = tf.train.RMSPropOptimizer(1e-4, momentum=0.9)
train = minimize_and_clip(opt, loss)
img_summary = [tf.summary.image(key, concate_to_image(net[2][key]), max_outputs=1) for key in net[2]]
img_summary +=[tf.summary.image("IO/input", concate_to_image(input), max_outputs=1)]
img_summary +=[tf.summary.image("IO/targets", concate_to_image(targets), max_outputs=1)]
img_summary +=[tf.summary.image("IO/output", tf.sigmoid(concate_to_image(net[0])), max_outputs=1)]
img_summary +=[tf.summary.image("IO/output x mask", concate_to_image(tf.sigmoid(net[0])*mask), max_outputs=1)]
img_summary = tf.summary.merge(img_summary)
# Step 01: Load configuration
try:
with open(CONFIG_FILE, 'r') as fp:
config = attrdict.AttrDict(yaml.load(fp))
except IOError:
log.error('Could not load configuration file: {}'.format(CONFIG_FILE))
sys.exit(1)
# Step 02: Load the training and testing data
log.info('Loading data')
try:
data = BabiDatasetLoader.load(
config.data.cache_dir,
config.data.data_dir,
config.dataset
)
if not data:
log.error('Could not load or reprocess the data. Aborting')
sys.exit(1)
except IOError as exc:
log.error('Failed to load the bAbI data set')
print(exc)
sys.exit(1)
# Step 03: Train the model
dnc = DNC(data, config.model)
dnc.build(config.model)
def sum2_task_single(args):
dirname = os.path.dirname(
os.path.abspath(__file__)) + '/data/save/sum2/{}'.format(args.name)
if not os.path.isdir(dirname):
os.mkdir(dirname)
print(dirname)
ckpts_dir = dirname
batch_size = 50
vocab_lower = 2
vocab_upper = 150
length_from = 1
length_to = args.seq_len
input_size = vocab_upper
output_size = vocab_upper
words_count = 32
word_size = 64
read_heads = 1
iterations = args.num_iter
start_step = 0
sequence_max_length = 100
if args.mode == 'train':
ntest = 10
else:
ntest = 50
graph = tf.Graph()
with graph.as_default():
with tf.Session(graph=graph) as session:
llprint("Building Computational Graph ... ")
ncomputer = DNC(StatelessRecurrentController,
input_size,
output_size,
sequence_max_length,
words_count,
word_size,
read_heads,
batch_size,
hidden_controller_dim=args.hidden_dim,
use_mem=args.use_mem,
dual_emb=True,
decoder_mode=True,
dual_controller=True,
write_protect=True)
output, prob, loss, apply_gradients = ncomputer.build_loss_function_mask(
)
llprint("Done!\n")
llprint("Initializing Variables ... ")
session.run(tf.global_variables_initializer())
if args.mode == 'test':
ncomputer.restore(session, ckpts_dir, ncomputer.print_config())
iterations = 1
llprint("Done!\n")
last_100_losses = []
start = 0 if start_step == 0 else start_step + 1
end = start_step + iterations + 1
minloss = 1000
start_time_100 = time.time()
end_time_100 = None
avg_100_time = 0.
avg_counter = 0
if args.mode == 'train':
train_writer = tf.summary.FileWriter(
'./data/summary/sum2/{}/'.format(ncomputer.print_config()),
session.graph)
for i in range(start, end + 1):
try:
llprint("\rIteration %d/%d" % (i, end))
if args.mode == 'train':
input_vec, output_vec, seq_len, decoder_point, masks, all_ose \
= sum2_sample_single_batch(vocab_lower, vocab_upper / 3, length_from, length_to,
vocab_size=vocab_upper, bs=batch_size)
loss_value, _ = session.run(
[loss, apply_gradients],
feed_dict={
ncomputer.input_data: input_vec,
ncomputer.target_output: output_vec,
ncomputer.sequence_length: seq_len,
ncomputer.decoder_point: decoder_point,
ncomputer.mask: masks
})
last_100_losses.append(loss_value)
summerize = (i % 100 == 0)
if summerize:
llprint(
"\n\t episode %d -->Avg. Cross-Entropy: %.7f\n" %
(i, np.mean(last_100_losses)))
if args.mode == 'train':
summary = tf.Summary()
summary.value.add(
tag='batch_train_loss',
simple_value=np.mean(last_100_losses))
trscores = []
mloss = 1000
for ii in range(ntest):
input_vec, output_vec, seq_len, decoder_point, masks, all_ose \
= sum2_sample_single_batch(vocab_lower, vocab_upper / 3, length_from, length_to,
vocab_size=vocab_upper, bs=batch_size)
tloss, out = session.run(
[loss, prob],
feed_dict={
ncomputer.input_data: input_vec,
ncomputer.sequence_length: seq_len,
ncomputer.decoder_point: decoder_point,
ncomputer.target_output: output_vec,
ncomputer.mask: masks
})
out = np.reshape(np.asarray(out),
[-1, seq_len, vocab_upper])
out = np.argmax(out, axis=-1)
bout_list = []
# print('{} vs {}'.format(seq_len,out.shape[1]))
for b in range(out.shape[0]):
out_list = []
for io in range(decoder_point, out.shape[1]):
if out[b][io] == 0:
break
out_list.append(out[b][io])
bout_list.append(out_list)
# for io in range(decoder_point, out.shape[1]):
# out_list.append(out[0][io])
if tloss < mloss:
mloss = tloss
trscores.append(
exact_acc(np.asarray(all_ose),
np.asarray(bout_list), 0.9))
if args.mode == 'train' and mloss < minloss:
minloss = mloss
print('save model')
ncomputer.save(session, ckpts_dir,
ncomputer.print_config())
print('test bleu {}', format(np.mean(trscores)))
print('test bleu {}', format(np.mean(trscores)))
if args.mode == 'train':
summary.value.add(tag='train_bleu',
simple_value=np.mean(trscores))
train_writer.add_summary(summary, i)
train_writer.flush()
end_time_100 = time.time()
elapsed_time = (end_time_100 - start_time_100) / 60
avg_counter += 1
avg_100_time += (1. / avg_counter) * (elapsed_time -
avg_100_time)
estimated_time = (avg_100_time *
((end - i) / 100.)) / 60.
print("\tAvg. 100 iterations time: %.2f minutes" %
(avg_100_time))
print("\tApprox. time to completion: %.2f hours" %
(estimated_time))
start_time_100 = time.time()
last_100_losses = []
except KeyboardInterrupt:
sys.exit(0)
llprint("\nSaving Checkpoint ... "),
input = tf.placeholder(tf.float32, shape=(None, None, task.input_size))
#
if args.controller == 'lstm':
controller = LSTMCell(args.controller_size)
elif args.controller == 'multilstm':
controller = tf.nn.rnn_cell.MultiRNNCell(
[LSTMCell(args.controller_size) for i in range(3)])
elif args.controller == 'ff':
controller = dnc.ff.FFWrapper(
dnc.ff.simple_feedforward(hidden=[args.controller_size] * 2))
if not args.no_dnc:
net = DNC(input,
memory,
output_size=task.output_size,
controller=controller,
log_memory=True)
output = net[0]
else:
output, _ = tf.nn.dynamic_rnn(controller, input, dtype=tf.float32)
output = tf.layers.dense(output, task.output_size, use_bias=False)
targets = tf.placeholder(dtype=tf.float32,
shape=[None, None, task.output_size])
mask = tf.placeholder(dtype=tf.float32, shape=[None, None, task.output_size])
if not args.no_mask:
loss = tf.losses.sigmoid_cross_entropy(logits=output,
weights=mask,
multi_class_labels=targets)
cost = tf.reduce_sum(mask * (1 - targets * (1 - tf.exp(-output))) *
file = open('trainset', 'rb')
trainset = pickle.load(file)
file.close()
file = open('trainlabels', 'rb')
trainlables = pickle.load(file)
file.close()
train_data_loader = T.utils.data.DataLoader(dataset=trainset,
batch_size=1,
shuffle=False)
trainset = iter(train_data_loader)
print('Defining model...')
diffy = DNC(25, 128, num_layers=2, independent_linears=True)
loss_fn = T.nn.MSELoss()
optimizer = T.optim.Adam(diffy.parameters(), lr=0.0001, betas=[0.9, 0.98])
maxVal = 0
maxItem = []
print('Finding max...')
for item in trainset:
if maxVal < len(item):
maxVal = len(item)
maxItem = item
summarize_freq = args.summarize_freq
check_freq = args.check_freq
# input_size = output_size = args.input_size
mem_slot = args.mem_slot
mem_size = args.mem_size
read_heads = args.read_heads
if args.memory_type == 'dnc':
rnn = DNC(input_size=args.input_size,
hidden_size=args.nhid,
rnn_type=args.rnn_type,
num_layers=args.nlayer,
num_hidden_layers=args.nhlayer,
dropout=args.dropout,
nr_cells=mem_slot,
cell_size=mem_size,
read_heads=read_heads,
gpu_id=args.cuda,
debug=args.visdom,
batch_first=True,
independent_linears=True)
elif args.memory_type == 'sdnc':
rnn = SDNC(input_size=args.input_size,
hidden_size=args.nhid,
rnn_type=args.rnn_type,
num_layers=args.nlayer,
num_hidden_layers=args.nhlayer,
dropout=args.dropout,
nr_cells=mem_slot,
cell_size=mem_size,
np.random.seed(1)
g = tf.Graph()
with g.as_default():
batch_size = 4
output_size = 20
input_size = 10
memory_config = {'words_num': 256, 'word_size': 64, 'read_heads_num': 4}
controller_config = {
"hidden_size": 128,
}
dnc = DNC(
controller_config,
memory_config,
output_size,
)
initial_state = dnc.initial_state(batch_size)
example_input = np.random.uniform(0, 1, (batch_size, input_size)).astype(
np.float32)
output_op, _ = dnc(
tf.convert_to_tensor(example_input),
initial_state,
)
init = tf.global_variables_initializer()
with tf.Session(graph=g) as sess:
init.run()
example_output = sess.run(output_op)
tf.summary.FileWriter("graphs", g).close()
mem_slot = args.mem_slot
mem_size = args.mem_size
read_heads = args.read_heads
# options, _ = getopt.getopt(sys.argv[1:], '', ['iterations='])
# for opt in options:
# if opt[0] == '-iterations':
# iterations = int(opt[1])
rnn = DNC(
input_size=args.input_size,
hidden_size=args.nhid,
rnn_type='lstm',
num_layers=args.nlayer,
nr_cells=mem_slot,
cell_size=mem_size,
read_heads=read_heads,
gpu_id=args.cuda
)
if args.cuda != -1:
rnn = rnn.cuda(args.cuda)
last_save_losses = []
optimizer = optim.Adam(rnn.parameters(), lr=args.lr)
for epoch in range(iterations + 1):
llprint("\rIteration {ep}/{tot}".format(ep=epoch, tot=iterations))
optimizer.zero_grad()
parser = argparse.ArgumentParser()
parser.add_argument("task", type=str)
parser.add_argument("datadir", type=str, help="Where do you want your datasets to be?")
parser.add_argument("--summary-dir", type=str, help="Summary directory for tensorboard", default=None)
args = parser.parse_args()
args.task = args.task.lower()
if not args.task in SUPPORTED_TASKS:
print("Unsupported task: {}".format(args.task))
sys.exit(1)
if args.task == 'babi':
print("== BABI ==")
download_babi(args.datadir)
X_train, X_test, y_train, y_test = load_babi(args.datadir, lesson=1)
elif args.task == "copy":
print("== COPY ==")
X_train, X_test, y_train, y_test = make_copy_dataset(args.datadir)
#X_train = X_train[:, -2:, :] # for debugging
#X_test = X_test[:, -2:, :] # for debugging
print("== DNC ==")
print()
machine = DNC(X_train, y_train, X_test, y_test,
summary_dir=args.summary_dir, N=X_train.shape[1], W=10, R=3,
#checkpoint_file="{}.ckpt".format(args.task),
optimizer="RMSProp")
print("== Training ==")
print()
machine.train()
import torch as T
from dnc import DNC
import torchvision as tv
train = tv.datasets.MNIST('.', train=True, transform=tv.transforms.ToTensor())
test = tv.datasets.MNIST('.', transform=tv.transforms.ToTensor())
batch_size = 1
train_data_loader = T.utils.data.DataLoader(dataset=train,
batch_size=batch_size,
shuffle=True)
trainset = iter(train_data_loader)
trainsize = len(train_data_loader)
diffy = DNC(28, 128, num_layers=1, independent_linears=True)
loss_fn = T.nn.MSELoss()
optimizer = T.optim.Adam(diffy.parameters(),
lr=0.0001,
eps=1e-9,
betas=[0.9, 0.98])
(controller_hidden, memory, read_vectors) = (None, None, None)
ranges = 2 * trainsize
for it in range(ranges):
optimizer.zero_grad()
img, true_out = next(trainset)
# helper funcs
def binary_cross_entropy(y_hat, y):
return tf.reduce_mean(-y * tf.log(y_hat) - (1 - y) * tf.log(1 - y_hat))
def llprint(message):
sys.stdout.write(message)
sys.stdout.flush()
# build graph
sess = tf.InteractiveSession()
llprint("building graph...\n")
optimizer = tf.train.RMSPropOptimizer(FLAGS.lr, momentum=FLAGS.momentum)
dnc = DNC(RNNController, FLAGS, input_steps=FLAGS.ascii_steps)
llprint("defining loss...\n")
y_hat, outputs = dnc.get_outputs()
# TODO: fix this loss: l2 on [:,:,:2] and then do binary cross entropy on <EOS> tags
loss = tf.nn.l2_loss(dnc.y -
y_hat) * 100. / (FLAGS.batch_size *
(FLAGS.ascii_steps + FLAGS.stroke_steps))
llprint("computing gradients...\n")
gradients = optimizer.compute_gradients(loss)
for i, (grad, var) in enumerate(gradients):
if grad is not None:
gradients[i] = (tf.clip_by_value(grad, -10, 10), var)
grad_op = optimizer.apply_gradients(gradients)
summarize_freq = args.summarize_freq
check_freq = args.check_freq
# input_size = output_size = args.input_size
mem_slot = args.mem_slot
mem_size = args.mem_size
read_heads = args.read_heads
if args.memory_type == 'dnc':
rnn = DNC(input_size=args.input_size,
hidden_size=args.nhid,
rnn_type=args.rnn_type,
num_layers=args.nlayer,
num_hidden_layers=args.nhlayer,
dropout=args.dropout,
nr_cells=mem_slot,
cell_size=mem_size,
read_heads=read_heads,
gpu_id=args.cuda,
debug=args.visdom,
batch_first=True,
independent_linears=True)
elif args.memory_type == 'sdnc':
rnn = SDNC(input_size=args.input_size,
hidden_size=args.nhid,
rnn_type=args.rnn_type,
num_layers=args.nlayer,
num_hidden_layers=args.nhlayer,
dropout=args.dropout,
nr_cells=mem_slot,
cell_size=mem_size,
For the Associative task, input_size: seq_width + 2, output_size: seq_width
For the NGram task, input_size: 1, output_size: 1
For the Priority Sort task, input_size: seq_width + 1, output_size: seq_width
"""
has_tau=0
if args.model=='ntm':
model = NTM(input_size= input_size,
output_size=output_size,
controller_size=args.lstm_size,
memory_units=128,
memory_unit_size=20,
num_heads=1)#task_params['num_heads'])
elif args.model=='dnc':
model = DNC(input_size= input_size,
output_size=output_size,
hidden_size=args.lstm_size,
nr_cells=128,
cell_size=20,
read_heads=1)#task_params['num_heads'])
model.init_param()
elif args.model=='sam':
model = SAM(input_size= input_size,
output_size=output_size,
hidden_size=args.lstm_size,
nr_cells=128,
cell_size=20,
read_heads=1)#read_heads=4???#task_params['num_heads'])
model.init_param()
elif args.model=='lstm':
marnn_config=args
print('marnn_config:\n',marnn_config)
model = MARNN(marnn_config,input_size=input_size,
def _build_model(self):
if args.mann == 'none':
def single_cell(num_units):
return tf.contrib.rnn.BasicLSTMCell(num_units, forget_bias=1.0)
cell = tf.contrib.rnn.OutputProjectionWrapper(
tf.contrib.rnn.MultiRNNCell([
single_cell(args.num_units) for _ in range(args.num_layers)
]),
args.num_bits_per_vector,
activation=None)
initial_state = tuple(
tf.contrib.rnn.LSTMStateTuple(
c=expand(tf.tanh(learned_init(args.num_units)),
dim=0,
N=args.batch_size),
h=expand(tf.tanh(learned_init(args.num_units)),
dim=0,
N=args.batch_size))
for _ in range(args.num_layers))
elif args.mann == 'ntm':
cell = NTMCell(args.num_layers,
args.num_units,
args.num_memory_locations,
args.memory_size,
args.num_read_heads,
args.num_write_heads,
addressing_mode='content_and_location',
shift_range=args.conv_shift_range,
reuse=False,
output_dim=args.num_bits_per_vector,
clip_value=args.clip_value,
init_mode=args.init_mode)
initial_state = cell.zero_state(args.batch_size, tf.float32)
elif args.mann == 'dnc':
access_config = {
'memory_size': args.num_memory_locations,
'word_size': args.memory_size,
'num_reads': args.num_read_heads,
'num_writes': args.num_write_heads,
}
controller_config = {
'hidden_size': args.num_units,
}
cell = DNC(access_config, controller_config,
args.num_bits_per_vector, args.clip_value)
initial_state = cell.initial_state(args.batch_size)
output_sequence, _ = tf.nn.dynamic_rnn(cell=cell,
inputs=self.inputs,
time_major=False,
initial_state=initial_state)
if args.task == 'copy' or args.task == 'repeat_copy':
self.output_logits = output_sequence[:, self.max_seq_len + 1:, :]
elif args.task == 'associative_recall':
self.output_logits = output_sequence[:,
3 * (self.max_seq_len + 1) +
2:, :]
elif args.task in ('traversal', 'shortest_path'):
self.output_logits = output_sequence[:, -self.max_seq_len:, :]
if args.task in ('copy', 'repeat_copy', 'associative_recall'):
self.outputs = tf.sigmoid(self.output_logits)
if args.task in ('traversal', 'shortest_path'):
output_logits_split = tf.split(self.output_logits, 9, axis=2)
self.outputs = tf.concat(
[tf.nn.softmax(logits) for logits in output_logits_split],
axis=2)
def model_fn(features, labels, mode, params):
# --------------------------------------------------------------------------
# Model
# --------------------------------------------------------------------------
access_config = {
"memory_size": 16,
"word_size": 16,
"num_reads": 4,
"num_writes": 1,
}
controller_config = {
"hidden_size": 64,
}
clip_value = 20
dnc_core = DNC(access_config, controller_config, 5, clip_value)
initial_state = dnc_core.initial_state(params["batch_size"])
output_logits, _ = tf.nn.dynamic_rnn(cell=dnc_core,
inputs=features,
time_major=True,
initial_state=initial_state)
# --------------------------------------------------------------------------
# Build EstimatorSpec
# --------------------------------------------------------------------------
train_loss = params["dataset_" + mode].cost(output_logits,
labels["target"],
labels["mask"])
# Set up optimizer with global norm clipping.
trainable_variables = tf.trainable_variables()
grads, _ = tf.clip_by_global_norm(
tf.gradients(train_loss, trainable_variables), params["max_grad_norm"])
global_step = tf.get_variable(
name="global_step",
shape=[],
dtype=tf.int64,
initializer=tf.zeros_initializer(),
trainable=False,
collections=[tf.GraphKeys.GLOBAL_VARIABLES, tf.GraphKeys.GLOBAL_STEP])
optimizer = tf.train.RMSPropOptimizer(params["lr"],
epsilon=params["optimizer_epsilon"])
train_step = optimizer.apply_gradients(zip(grads, trainable_variables),
global_step=global_step)
# dataset_tensors_np, output_np = sess.run([dataset_tensors, output])
# dataset_string = dataset.to_human_readable(dataset_tensors_np, output_np)
output_sigmoid = tf.nn.sigmoid(output_logits)
delta = tf.abs(output_sigmoid - labels["target"])
tf.summary.histogram("delta", delta)
equality = tf.cast(delta < 0.1, tf.float32) * tf.expand_dims(
labels["mask"], -1)
correct_elements = tf.reduce_mean(tf.reduce_sum(equality, [0, 2]))
pct_correct = tf.reduce_mean(
tf.reduce_sum(equality, [0, 2]) /
tf.cast(labels["total_targ_batch"], tf.float32))
eval_metric_ops = {
"accuracy":
tf.metrics.mean(pct_correct),
"loss":
tf.metrics.mean(train_loss),
"correct_elements":
tf.metrics.mean(correct_elements),
"total_elements":
tf.metrics.mean(tf.cast(labels["total_targ_batch"], tf.float32))
}
image_mask = tf.expand_dims(tf.expand_dims(labels["mask"], -1), -1)
xent = tf.expand_dims(
tf.nn.sigmoid_cross_entropy_with_logits(
labels=labels["target"],
logits=output_logits * tf.expand_dims(labels["mask"], -1)), -1)
image = tf.concat(
[
# tf.expand_dims(output_logits, -1),
output_sigmoid,
labels["target"],
# tf.expand_dims(equality, -1),
# xent / tf.reduce_max(xent)
],
-1)
# tf summary image expects shape [batch_size, height, width, channels]
image = tf.transpose(image, perm=[1, 0, 2])
tf.summary.image("output_compare", tf.expand_dims(image, -1), 4)
tf.summary.scalar("train_loss", tf.reduce_mean(train_loss))
tf.summary.scalar("train_accuracy", pct_correct)
tf.summary.scalar("correct_elements", correct_elements)
tf.summary.scalar("total_elements",
tf.reduce_mean(labels["total_targ_batch"], axis=-1))
tf.summary.scalar(
"max_length",
tf.convert_to_tensor(params["dataset_" + mode]._max_length))
tf.summary.scalar(
"max_repeats",
tf.convert_to_tensor(params["dataset_" + mode]._max_repeats))
return tf.estimator.EstimatorSpec(mode,
loss=train_loss,
train_op=train_step,
eval_metric_ops=eval_metric_ops,
scaffold=gen_scaffold(params))