def __init__(self, F, u, bc): super().__init__() V = u.function_space du = function.TrialFunction(V) self.L = F self.a = derivative(F, u, du) self.bc = bc self._F, self._J = None, None
def __init__(self, F, u, bc): super().__init__() V = u.function_space du = function.TrialFunction(V) self.L = F self.a = derivative(F, u, du) self.a_comp = dolfin.fem.Form(self.a) self.bc = bc self._F, self._J = None, None self.u = u
def project(v, V=None, bcs=[], mesh=None, funct=None): """Return projection of given expression *v* onto the finite element space *V*. *Arguments* v a :py:class:`Function <dolfin.functions.function.Function>` or an :py:class:`Expression <dolfin.functions.expression.Expression>` bcs Optional argument :py:class:`list of DirichletBC <dolfin.fem.bcs.DirichletBC>` V Optional argument :py:class:`FunctionSpace <dolfin.functions.functionspace.FunctionSpace>` mesh Optional argument :py:class:`mesh <dolfin.cpp.Mesh>`. funct Target function where result is stored. *Example of usage* .. code-block:: python v = Expression("sin(pi*x[0])") V = FunctionSpace(mesh, "Lagrange", 1) Pv = project(v, V) This is useful for post-processing functions or expressions which are not readily handled by visualization tools (such as for example discontinuous functions). """ # Try figuring out a function space if not specified if V is None: # Create function space based on Expression element if trying # to project an Expression if isinstance(v, function.Expression): if mesh is not None and isinstance(mesh, cpp.mesh.Mesh): V = function.FunctionSpace(mesh, v.ufl_element()) # else: # cpp.dolfin_error("projection.py", # "perform projection", # "Expected a mesh when projecting an Expression") else: # Otherwise try extracting function space from expression V = _extract_function_space(v, mesh) # Check arguments # Ensure we have a mesh and attach to measure if mesh is None: mesh = V.mesh dx = ufl.dx(mesh) # Define variational problem for projection w = function.TestFunction(V) Pv = function.TrialFunction(V) a = ufl.inner(Pv, w) * dx L = ufl.inner(v, w) * dx # Assemble linear system A = fem.assemble_matrix(a, bcs) A.assemble() b = fem.assemble_vector(L) fem.apply_lifting(b, [a], [bcs]) b.ghostUpdate(addv=PETSc.InsertMode.ADD, mode=PETSc.ScatterMode.REVERSE) fem.set_bc(b, bcs) # Solve linear system for projection if funct is None: funct = function.Function(V) la.solve(A, funct.vector, b) return funct
def project(v, V=None, bcs=None, mesh=None, function=None, solver_type="lu", preconditioner_type="default", form_compiler_parameters=None): """Return projection of given expression *v* onto the finite element space *V*. *Arguments* v a :py:class:`Function <dolfin.functions.function.Function>` or an :py:class:`Expression <dolfin.functions.expression.Expression>` bcs Optional argument :py:class:`list of DirichletBC <dolfin.fem.bcs.DirichletBC>` V Optional argument :py:class:`FunctionSpace <dolfin.functions.functionspace.FunctionSpace>` mesh Optional argument :py:class:`mesh <dolfin.cpp.Mesh>`. solver_type see :py:func:`solve <dolfin.fem.solving.solve>` for options. preconditioner_type see :py:func:`solve <dolfin.fem.solving.solve>` for options. form_compiler_parameters see :py:class:`Parameters <dolfin.cpp.Parameters>` for more information. *Example of usage* .. code-block:: python v = Expression("sin(pi*x[0])") V = FunctionSpace(mesh, "Lagrange", 1) Pv = project(v, V) This is useful for post-processing functions or expressions which are not readily handled by visualization tools (such as for example discontinuous functions). """ # Try figuring out a function space if not specified if V is None: # Create function space based on Expression element if trying # to project an Expression if isinstance(v, function.Expression): if mesh is not None and isinstance(mesh, cpp.mesh.Mesh): V = function.FunctionSpace(mesh, v.ufl_element()) # else: # cpp.dolfin_error("projection.py", # "perform projection", # "Expected a mesh when projecting an Expression") else: # Otherwise try extracting function space from expression V = _extract_function_space(v, mesh) # Check arguments # Ensure we have a mesh and attach to measure if mesh is None: mesh = V.mesh() dx = ufl.dx(mesh) # Define variational problem for projection w = function.TestFunction(V) Pv = function.TrialFunction(V) a = ufl.inner(w, Pv) * dx L = ufl.inner(w, v) * dx # Assemble linear system A, b = fem.assemble_system( a, L, bcs=bcs, form_compiler_parameters=form_compiler_parameters) # Solve linear system for projection if function is None: function = function.Function(V) la.solve(A, function.vector(), b, solver_type, preconditioner_type) return function