Exemple #1
0
from dpdata import System, LabeledSystem, MultiSystems
import os

fp = open('folders_to_merge', 'r')
folders_org = fp.readlines()

folders = []
fp.close()

for i in range(len(folders_org)):
    if '#' in folders_org[i] or folders_org[i] == '\n':
        pass
    else:
        folders.append(folders_org[i].replace('\n', ''))

for path in folders:
    pwd = os.getcwd()
    os.chdir(path)
    print("process ", path)
    #s=System('POSCAR',fmt='poscar')
    ls = LabeledSystem('OUTCAR', fmt='outcar')
    ls.to_deepmd_raw('deepmd')
    ls.to_deepmd_npy('deepmd', set_size=1000)
    os.chdir(pwd)
    print("done ", path)

print("done")
Exemple #2
0
from dpdata import System, LabeledSystem, MultiSystems

#s = System('POSCAR', fmt='poscar')
#print(s)
ls = LabeledSystem('OUTCAR', fmt='outcar')
"""
if len(ls)%2==0:
    size = int(len(ls)/2)
else:
    size = int(len(ls)/2) + 1
"""
ls.to_deepmd_raw('.')
#ls.to_deepmd_npy('deepmd', set_size=size)