def heart_rate_variability(sample, lead, rpeak_method = 'string'):
curdir = 'DATA\TrainData_FeatureExtraction'
[all_data, header_data, BAD_LABELS] = data_read.data_files_load(curdir)
data = all_data[sample][lead]
"""INITIALIZE DETECTOR CLASS WITH THE SAMPLING RATE:"""
detectors = Detectors(500)
"""FIND RPEAK USING ONE OF THE METHODS BELOW--------------------"""
if rpeak_method == 'hamilton' or rpeak_method == 'string':
#Hamilton.
r_peaks = detectors.hamilton_detector(data)
elif rpeak_method == 'christov':
#Christov
r_peaks = detectors.christov_detector(data)
elif rpeak_method == 'engelse':
#Engelse and Zeelenberg
r_peaks = detectors.engzee_detector(data)
elif rpeak_method == 'pan':
#Pan and Tompkins
r_peaks = detectors.pan_tompkins_detector(data)
elif rpeak_method == 'stationary_wavelet':
#Stationary Wavelet Transform
r_peaks = detectors.swt_detector(data)
elif rpeak_method == 'two_moving_average':
#Two Moving Average
r_peaks = detectors.two_average_detector(data)
#elif rpeak_method == 'matched_filter':
#Matched Filter
#go to pyhrv documentation to find the template file
#r_peaks = detectors.matched_filter_detector(data,template_file)
"""COMPUTE NNI SERIES-------------------------------------------"""
nn = nn_intervals(r_peaks) #nni seems to be off by a factor of 3
print("\n\n", nn, "\n\n")
"""PLOT ECG/TACHOGRAM-------------------------------------------"""
#plot_ecg(data, sampling_rate = 500)
#tachogram(nn, sampling_rate = 500)
"""COMPUTE HRV--------------------------------------------------"""
results = hrv(nn, None, None, 500)
"""COMPUTE HR PARAMETERS--(SOMETHING IS WRONG HERE BPM TOO HIGH)"""
hr = heart_rate(nn)
"""COMPUTE FREQUENCY ANALYSIS-----------------------------------"""
freq_results = results['fft_bands']
return results, hr, freq_results
def detect_r_peaks(SampleRate, data):
"""
R peaks detection and RR intervals calculation
"""
detectors = Detectors(SampleRate) # use library for peak detection to get array of r peak positions
r_peaks = detectors.engzee_detector(data)
r_peaks = np.array(r_peaks) # convert list to array
return r_peaks
def engelze_zeelenberg_single(fields, record, save_path, sig, save=True):
detectors = Detectors(fields['fs'])
try:
r_peaks = detectors.engzee_detector(sig[:, 0])
except Exception:
r_peaks = [0]
if save:
save_prediction(r_peaks, record, save_path)
else:
return r_peaks
def find_peaks(ecg_df):
unfiltered_ecg = ecg_df['ecg'].values
fs = 500 # sampling freq. in Hz
detectors = Detectors(fs)
# r_peaks = detectors.two_average_detector(unfiltered_ecg)
# r_peaks = detectors.matched_filter_detector(unfiltered_ecg,"templates/template_250hz.csv")
# r_peaks = detectors.swt_detector(unfiltered_ecg)
r_peaks = detectors.engzee_detector(unfiltered_ecg)
# r_peaks = detectors.christov_detector(unfiltered_ecg)
# r_peaks = detectors.hamilton_detector(unfiltered_ecg)
# r_peaks = detectors.pan_tompkins_detector(unfiltered_ecg)
r_peaks = ecg_df['timestamp'][r_peaks].values
return r_peaks
time = math.floor(len(ecg) / fs)
points = time * 256
print("freq", fs)
print("ecg initial len", len(ecg))
print("ecg time", time)
print("ecg new points", points)
#downsampling
resampled_signal = scipy.signal.resample(ecg, points)
print("ecg resampled len", len(resampled_signal))
#r peak detector
detectors = Detectors(256)
r_peaks = detectors.engzee_detector(resampled_signal[0:34304])
rr = np.diff(r_peaks)
'''
#r peak plot
print(r_peaks)
plt.figure()
plt.plot(ecg[0:2560])
plt.plot(r_peaks, ecg[r_peaks], 'ro')
plt.title('Detected R-peaks')
plt.savefig('new_downsampled_rpeaks.png', dpi=300) #plot for 5 seconds (2500 points)
'''
#HRV time domain parameters
time_domain_features = get_time_domain_features(r_peaks)
print(time_domain_features)
def ECGfeatures(self, df, sampling_rate=500):
drivers = df['Driver'].value_counts()
df.reset_index(inplace=True)
# Filtering ECG to remove noise
for dr in drivers.index:
after = ecg.ecg(signal=df.loc[df['Driver'] == dr, 'ECG'],
sampling_rate=sampling_rate,
show=False)
df.loc[df['Driver'] == dr, 'ECG'] = after[1]
#Calculating R-R Peaks
detectors = Detectors(sampling_rate)
r_peaks = detectors.engzee_detector(df['ECG'])
# Calculating R-R Interval
df['RMSSD'] = [0 for _ in range(len(df))]
rp = pd.Series(r_peaks)
hrv_obj = HRV(sampling_rate)
for dr in drivers.index:
start = df.loc[df['Driver'] == dr].index[0]
end = df.loc[df['Driver'] == dr].index[-1]
RMSSD = hrv_obj.RMSSD(rp[(rp > start) & (rp < end)],
normalise=False)
df.loc[df['Driver'] == dr, 'RMSSD'] = RMSSD
print('Finished extracting RMSSD successfully')
drivers = df['Driver'].value_counts().keys()
# Calculating other ECG features
df['meanNN'] = [0 for _ in range(len(df))]
df['sdNN'] = [0 for _ in range(len(df))]
df['cvNN'] = [0 for _ in range(len(df))]
df['CVSD'] = [0 for _ in range(len(df))]
df['medianNN'] = [0 for _ in range(len(df))]
df['madNN'] = [0 for _ in range(len(df))]
df['mcvNN'] = [0 for _ in range(len(df))]
df['pNN20'] = [0 for _ in range(len(df))]
df['pNN50'] = [0 for _ in range(len(df))]
for dr in drivers:
start = df.loc[df['Driver'] == dr, :].index[0]
end = df.loc[df['Driver'] == dr, :].index[-1]
crop = rp[(rp > start) & (rp < end)].diff()
rmssd = df.loc[start, 'RMSSD']
meanNN = crop.mean()
df.loc[df['Driver'] == dr, 'meanNN'] = meanNN
std = crop.std()
df.loc[df['Driver'] == dr, 'sdNN'] = std
cvNN = std / meanNN
df.loc[df['Driver'] == dr, 'cvNN'] = cvNN
cvsd = rmssd / meanNN
df.loc[df['Driver'] == dr, 'CVSD'] = cvsd
medianNN = crop.median()
df.loc[df['Driver'] == dr, 'medianNN'] = medianNN
madNN = crop.mad()
df.loc[df['Driver'] == dr, 'madNN'] = madNN
mcvNN = madNN / medianNN
df.loc[df['Driver'] == dr, 'mcvNN'] = mcvNN
pNN20 = hrv_obj.pNN20(crop)
df.loc[df['Driver'] == dr, 'pNN20'] = pNN20
pNN50 = hrv_obj.pNN50(crop)
df.loc[df['Driver'] == dr, 'pNN50'] = pNN50
print(
'Finished extracting meanNN, sdNN, cvNN, CVSD, medianNN, madNN, mcvNN, pNN20, pNN50 successfully'
)
self.df = df
return df
from ecgdetectors import Detectors
from hrvanalysis import remove_outliers, remove_ectopic_beats, interpolate_nan_values
from hrvanalysis import get_time_domain_features
from hrvanalysis import plot_psd
from hrvanalysis import plot_distrib, plot_timeseries
from hrvanalysis import plot_timeseries
#load dataset for humans
dreamer_data = loadmat('DREAMER.mat')
#take one signal
signal1 = pd.DataFrame(dreamer_data['DREAMER'].item(
0, 0)[0].item(2).item(0)[3]['stimuli'].item(0)[5][0],
columns=["c1", "c2"])
#take one channel
c11 = signal1['c1']
#r peak detector
detectors = Detectors(256)
r_peaks = detectors.engzee_detector(c11[0:34304])
rr = np.diff(r_peaks)
#HRV time domain parameters
time_domain_features = get_time_domain_features(r_peaks)
print(time_domain_features)
#HRV frequency domain parameters
plot_psd(rr, method="welch")
plt.show()
def detect_r_peaks(ecg_record, fs):
detector = Detectors(fs)
unfiltered_ecg = ecg_record[0][:, 1]
r_peaks = detector.engzee_detector(unfiltered_ecg)
return r_peaks
ax_rc=filters.add_subplot(5,1,4)
ax_rc.title.set_text("RC Filtered")
plt.plot(xrc,color='red')
plt.plot(peaks_rc, xrc[peaks_rc], "kx")
ax_butter=filters.add_subplot(5,1,5)
ax_butter.title.set_text("Butter Filtered")
plt.plot(xbutter,color='green')
plt.plot(peaks_butter, xbutter[peaks_butter], "kx")
plt.savefig('Plots/Peaks Analog & Digital.png')
plt.show()
#r peak detection with engzee
r_peaks_butter = detectors.engzee_detector(xbutter)
r_peaks_rc = detectors.engzee_detector(xrc)
r_peaks_wavelet = detectors.engzee_detector(xwavelet)
r_peaks_clean = detectors.engzee_detector(xclean)
r_peaks_noisy=detectors.engzee_detector(xnoisy)
rpeaks=plt.figure(figsize=(20,10))
plt.grid(False)
plt.xlabel('Time (Sec)')
plt.ylabel('mV')
plt.title('Engzee Analog & Digital',y=1.08)
ax_clean=rpeaks.add_subplot(5,1,1)
ax_clean.title.set_text("Clean Peaks")
plt.plot(xclean)
# attempt to use R-peak detection library on PPG data
import numpy as np
import matplotlib.pyplot as plt
import pathlib
from ecgdetectors import Detectors
current_dir = pathlib.Path(__file__).resolve()
example_dir = current_dir.parent/'Raw'/'test2jan21'
unfiltered_ecg_dat = np.loadtxt(example_dir)
unfiltered_ecg = unfiltered_ecg_dat[:, 0]
fs = 250
detectors = Detectors(fs)
# r_peaks = detectors.two_average_detector(unfiltered_ecg)
#r_peaks = detectors.matched_filter_detector(unfiltered_ecg,"templates/template_250hz.csv")
# r_peaks = detectors.swt_detector(unfiltered_ecg)
r_peaks = detectors.engzee_detector(unfiltered_ecg)
# r_peaks = detectors.christov_detector(unfiltered_ecg)
# r_peaks = detectors.hamilton_detector(unfiltered_ecg)
# r_peaks = detectors.pan_tompkins_detector(unfiltered_ecg)
plt.figure()
plt.plot(unfiltered_ecg)
plt.plot(r_peaks, unfiltered_ecg[r_peaks], 'ro')
plt.title('Detected R-peaks')
plt.show()
def Rpeak_detect(x):
fs = 500
detectors = Detectors(fs)
x_rpeaks = detectors.engzee_detector(x)
return x_rpeaks
def ecg_peaks(x, sfreq=1000, new_sfreq=1000, method='pan-tompkins',
find_local=True, win_size=100):
"""A simple wrapper for many popular R peaks detectors algorithms.
This function calls methods from the py-ecg-detectors [#]_ module.
Parameters
----------
x : list or 1d array-like
The oxi signal.
sfreq : int
The sampling frequency. Default is set to 75 Hz.
method : str
The method used. Can be one of the following: 'hamilton', 'christov',
'engelse-zeelenberg', 'pan-tompkins', 'wavelet-transform',
'moving-average'.
find_local : bool
If *True*, will use peaks indexs to search for local peaks given the
window size (win_size).
win_size : int
Size of the time window used by :py:func:`systole.utils.to_neighbour()`
Returns
-------
peaks : 1d array-like
Numpy array containing peaks index.
resampled_signal : 1d array-like
Signal resampled to the `new_sfreq` frequency.
Notes
-----
This function will call the py-ecg-detectors package to perform R wave
detection.
.. warning :: This function will resample the signal to 1000 Hz.
Examples
--------
>>> from systole import import_dataset
>>> from systole.detection import ecg_peaks
>>> signal_df = import_dataset()[:20*2000]
>>> signal, peaks = ecg_peaks(signal_df.ecg.to_numpy(), method='hamilton',
>>> sfreq=2000, find_local=True)
>>> print(f'{sum(peaks)} peaks detected.')
24 peaks detected.
References
----------
.. [#] Howell, L., Porr, B. Popular ECG R peak detectors written in
python. DOI: 10.5281/zenodo.3353396
"""
if isinstance(x, list):
x = np.asarray(x)
# Interpolate
f = interp1d(np.arange(0, len(x)/sfreq, 1/sfreq),
x,
fill_value="extrapolate")
time = np.arange(0, len(x)/sfreq, 1/new_sfreq)
x = f(time)
# Copy resampled signal for output
resampled_signal = np.copy(x)
detectors = Detectors(new_sfreq)
if method == 'hamilton':
peaks_idx = detectors.hamilton_detector(resampled_signal)
elif method == 'christov':
peaks_idx = detectors.christov_detector(resampled_signal)
elif method == 'engelse-zeelenberg':
peaks_idx = detectors.engzee_detector(resampled_signal)
elif method == 'pan-tompkins':
peaks_idx = detectors.pan_tompkins_detector(resampled_signal)
elif method == 'wavelet-transform':
peaks_idx = detectors.swt_detector(resampled_signal)
elif method == 'moving-average':
peaks_idx = detectors.two_average_detector(resampled_signal)
else:
raise ValueError(
'Invalid method provided, should be: hamilton,',
'christov, engelse-zeelenberg, pan-tompkins, wavelet-transform,',
'moving-average')
peaks = np.zeros(len(resampled_signal), dtype=bool)
peaks[peaks_idx] = True
if find_local is True:
peaks = to_neighbour(resampled_signal, peaks, size=win_size)
return resampled_signal, peaks
ecg_channel_maths = maths_class.einthoven_II
elif "v" in sys.argv[1]:
ecg_channel_sitting = sitting_class.cs_V2_V1
ecg_channel_maths = maths_class.cs_V2_V1
else:
print(
"Bad argument. Specify 'e' for Einthoven or 'v' for the Chest strap."
)
exit(1)
r_peaks = detectors.swt_detector(ecg_channel_sitting)
sitting_rr_sd.append(hrv_class.RMSSD(r_peaks, True))
r_peaks = detectors.swt_detector(ecg_channel_maths)
maths_rr_sd.append(hrv_class.RMSSD(r_peaks, True))
sitting_error_rr = detectors.engzee_detector(ecg_channel_sitting)
sitting_error_rr_sd.append(hrv_class.RMSSD(sitting_error_rr, True))
maths_error_rr = detectors.engzee_detector(ecg_channel_maths)
maths_error_rr_sd.append(hrv_class.RMSSD(maths_error_rr, True))
maths_true_rr = maths_class.anno_cs
maths_true_sd.append(hrv_class.RMSSD(maths_true_rr, True))
sitting_true_rr = sitting_class.anno_cs
sitting_true_sd.append(hrv_class.RMSSD(sitting_true_rr, True))
subject = np.array(subject)
width = 0.4
fig, ax = plt.subplots()
def run_algo(algorithm: str, sig: numpy.ndarray,
freq_sampling: int) -> List[int]:
"""
run a qrs detector on a signal
:param algorithm: name of the qrs detector to use
:type algorithm: str
:param sig: values of the sampled signal to study
:type sig: ndarray
:param freq_sampling: value of sampling frequency of the signal
:type freq_sampling: int
:return: localisations of qrs detections
:rtype: list(int)
"""
detectors = Detectors(freq_sampling)
if algorithm == 'Pan-Tompkins-ecg-detector':
qrs_detections = detectors.pan_tompkins_detector(sig)
elif algorithm == 'Hamilton-ecg-detector':
qrs_detections = detectors.hamilton_detector(sig)
elif algorithm == 'Christov-ecg-detector':
qrs_detections = detectors.christov_detector(sig)
elif algorithm == 'Engelse-Zeelenberg-ecg-detector':
qrs_detections = detectors.engzee_detector(sig)
elif algorithm == 'SWT-ecg-detector':
qrs_detections = detectors.swt_detector(sig)
elif algorithm == 'Matched-filter-ecg-detector' and freq_sampling == 360:
qrs_detections = detectors.matched_filter_detector(
sig, 'templates/template_360hz.csv')
elif algorithm == 'Matched-filter-ecg-detector' and freq_sampling == 250:
qrs_detections = detectors.matched_filter_detector(
sig, 'templates/template_250hz.csv')
elif algorithm == 'Two-average-ecg-detector':
qrs_detections = detectors.two_average_detector(sig)
elif algorithm == 'Hamilton-biosppy':
qrs_detections = bsp_ecg.ecg(signal=sig,
sampling_rate=freq_sampling,
show=False)[2]
elif algorithm == 'Christov-biosppy':
order = int(0.3 * freq_sampling)
filtered, _, _ = bsp_tools.filter_signal(signal=sig,
ftype='FIR',
band='bandpass',
order=order,
frequency=[3, 45],
sampling_rate=freq_sampling)
rpeaks, = bsp_ecg.christov_segmenter(signal=filtered,
sampling_rate=freq_sampling)
rpeaks, = bsp_ecg.correct_rpeaks(signal=filtered,
rpeaks=rpeaks,
sampling_rate=freq_sampling,
tol=0.05)
_, qrs_detections = bsp_ecg.extract_heartbeats(
signal=filtered,
rpeaks=rpeaks,
sampling_rate=freq_sampling,
before=0.2,
after=0.4)
elif algorithm == 'Engelse-Zeelenberg-biosppy':
order = int(0.3 * freq_sampling)
filtered, _, _ = bsp_tools.filter_signal(signal=sig,
ftype='FIR',
band='bandpass',
order=order,
frequency=[3, 45],
sampling_rate=freq_sampling)
rpeaks, = bsp_ecg.engzee_segmenter(signal=filtered,
sampling_rate=freq_sampling)
rpeaks, = bsp_ecg.correct_rpeaks(signal=filtered,
rpeaks=rpeaks,
sampling_rate=freq_sampling,
tol=0.05)
_, qrs_detections = bsp_ecg.extract_heartbeats(
signal=filtered,
rpeaks=rpeaks,
sampling_rate=freq_sampling,
before=0.2,
after=0.4)
elif algorithm == 'Gamboa-biosppy':
order = int(0.3 * freq_sampling)
filtered, _, _ = bsp_tools.filter_signal(signal=sig,
ftype='FIR',
band='bandpass',
order=order,
frequency=[3, 45],
sampling_rate=freq_sampling)
rpeaks, = bsp_ecg.gamboa_segmenter(signal=filtered,
sampling_rate=freq_sampling)
rpeaks, = bsp_ecg.correct_rpeaks(signal=filtered,
rpeaks=rpeaks,
sampling_rate=freq_sampling,
tol=0.05)
_, qrs_detections = bsp_ecg.extract_heartbeats(
signal=filtered,
rpeaks=rpeaks,
sampling_rate=freq_sampling,
before=0.2,
after=0.4)
elif algorithm == 'mne-ecg':
qrs_detections = mne_ecg.qrs_detector(freq_sampling, sig)
elif algorithm == 'heartpy':
rol_mean = rolling_mean(sig, windowsize=0.75, sample_rate=100.0)
qrs_detections = hp_pkdetection.detect_peaks(
sig, rol_mean, ma_perc=20, sample_rate=100.0)['peaklist']
elif algorithm == 'gqrs-wfdb':
qrs_detections = processing.qrs.gqrs_detect(sig=sig, fs=freq_sampling)
elif algorithm == 'xqrs-wfdb':
qrs_detections = processing.xqrs_detect(sig=sig, fs=freq_sampling)
else:
raise ValueError(
f'Sorry... unknown algorithm. Please check the list {algorithms_list}'
)
cast_qrs_detections = [int(element) for element in qrs_detections]
return cast_qrs_detections
plt.plot(x1)
plt.plot(peaks4, x4[peaks4] + 3, "kx")
plt.plot(peaks3, x3[peaks3] + 2, "kx")
plt.plot(peaks2, x2[peaks2] + 1, "kx")
plt.plot(peaks1, x1[peaks1], "kx")
plt.grid(False)
plt.legend([
'True ECG', 'Wavelet Filtered ECG', 'Butter Filtered ECG',
'RC Filtered ECG'
])
plt.xlabel('Time (Sec)')
plt.title('Peaks Analog & Digital')
plt.savefig('Plots/Peaks Analog & Digital.png')
plt.show()
r_peaks1 = detectors.engzee_detector(x1)
r_peaks2 = detectors.engzee_detector(x2)
r_peaks3 = detectors.engzee_detector(x3)
r_peaks4 = detectors.engzee_detector(x4)
plt.plot(x4 + 3)
plt.plot(x3 + 2)
plt.plot(x2 + 1)
plt.plot(x1)
plt.plot(r_peaks4, x4[r_peaks4] + 3, "kx")
plt.plot(r_peaks3, x3[r_peaks3] + 2, "kx")
plt.plot(r_peaks2, x2[r_peaks2] + 1, "kx")
plt.plot(r_peaks1, x1[r_peaks1], "kx")
plt.grid(False)
plt.legend(['True ECG', 'Butter Filtered ECG', 'RC Filtered ECG'])
plt.xlabel('Time (Sec)')
def ecg_detector(self, s, detector_type="pan_tompkins"):
"""
Expose
ECG peak detector from the github
https://github.com/berndporr/py-ecg-detectors
Parameters
----------
s :
Input signal
fs:
The signal frequency. Default is '256 Hz'
detector_type:
'hamilton': Open Source ECG Analysis Software Documentation,
E.P.Limited, 2002.
'christov':Real time electrocardiogram QRS detection using combined
adaptive threshold
'engzee': A single scan algorithm for QRS detection and
feature extraction
'swt': Real-time QRS detector using Stationary Wavelet Transform
for Automated ECG Analysis.
Uses the Pan and Tompkins thresolding.
'mva': Frequency Bands Effects on QRS Detection.
'mtemp':
'pan_tompkins': A Real-Time QRS Detection Algorithm
Default = 'pan_tompkins'
Returns
-------
type
an array of 1-D numpy array represent the peak list
"""
if self.wave_type == 'ppg':
warnings.warn("A ECG detectors is using on PPG waveform. "
"Output may produce incorrect result")
detector = Detectors(self.fs)
if detector_type == 'hamilton':
res = detector.hamilton_detector(s)
elif detector_type == 'christov':
res = detector.christov_detector(s)
elif detector_type == 'engzee':
res = detector.engzee_detector(s)
elif detector_type == 'swt':
res = detector.swt_detector(s)
elif detector_type == 'mva':
res = detector.two_average_detector(s)
elif detector_type == 'mtemp':
res = self.matched_filter_detector(s)
else:
res = detector.pan_tompkins_detector(s)
return np.array(res)
print('how many values with nan are present now ? - ' + str(nan_count))
#detecting the R peaks from the ECG signal to detect heart rate
#use a library called ecgdetectors from Glasgov university
from ecgdetectors import Detectors
path = '/scratch/lnw8px/ECG_radar/clinical/GDN0001/GDN0001_1_Resting.mat'
x = loadmat(path)
fs_ecg = x['fs_ecg'][0, 0]
detectors = Detectors(fs_ecg)
ecg2 = x['tfm_ecg2'].squeeze()
#select a part of the signal for easy visualization
sig = ecg2[8000:16000]
#detect R peaks with engzee_detector
#see https://github.com/berndporr/py-ecg-detectors for details
r_peaks = detectors.engzee_detector(sig)
plt.figure()
plt.plot(sig)
plt.plot(r_peaks, sig[r_peaks], 'ro')
plt.title('Detected R-peaks')
#get the time difference between r_peaks to calculate the time between two heart beats
sig = ecg2
r_peaks = detectors.engzee_detector(sig)
diffs = np.diff(r_peaks)
#convert this into time
heart_periods = diffs / fs_ecg
plt.hist(heart_periods, bins=500)
label = str(filename[0])
np_label = np.array(label)
record = wfdb.rdrecord(directory + label)
record.__dict__['sig_name']
# print(record.__dict__['sig_name'])
signal_name = record.__dict__['sig_name']
for i, c in enumerate(signal_name):
if c == 'MLII':
ECG_data = record.__dict__['p_signal'][
0:50000, record.__dict__['sig_name'].index("MLII")]
ECG_filt_data = butter_bandpass_filter(ECG_data,
lowcut,
highcut,
fs,
order=1)
detectors = Detectors(fs)
r_peaks = detectors.engzee_detector(ECG_filt_data)
Sequence_ECG = []
for i, c in enumerate(r_peaks[1:-1]):
temp = np.append(ECG_filt_data[c - 60:c + 100], np_label)
Sequence_ECG.append(temp)
# test = pd.DataFrame(Sequence_ECG)
test1 = test1.append(pd.DataFrame(Sequence_ECG), ignore_index=True)
# print(test1[test1.columns[22:25]].head())
# print(test1[test1.columns[22:25]].tail())
test1.to_csv('data.csv')