def test_generateImageLinks(self):
referenceDataPath = self.dataPath / 'inDataXDSIntegration.json'
inData = UtilsTest.loadAndSubstitueTestData(referenceDataPath)
XDSTask.generateImageLinks(inData)
#
referenceDataPath = self.dataPath / 'inDataXDSIntegration_one_subWedge.json'
inData = UtilsTest.loadAndSubstitueTestData(referenceDataPath)
XDSTask.generateImageLinks(inData)
def test_getXDSDetector(self):
referenceDataPath = self.dataPath / 'inDataXDSIndexing.json'
inData = UtilsTest.loadAndSubstitueTestData(referenceDataPath)
firstSubWedge = inData["subWedge"][0]
dictDetector = firstSubWedge["experimentalCondition"]["detector"]
dictXDSDetector = XDSTask.getXDSDetector(dictDetector)
# pprint.pprint(dictXDSDetector)
self.assertTrue(dictXDSDetector["name"] == "PILATUS")
def tes_writeSPOT_XDS(self):
spotFile = self.dataPath / '00001.spot'
spotXdsReferenceFile = self.dataPath / 'SPOT.XDS'
with open(str(spotXdsReferenceFile)) as f:
spotXdsReference = f.read()
spotXds = XDSTask.createSPOT_XDS([spotFile], oscRange=1)
with open('/tmp/SPOT.XDS', 'w') as f:
f.write(spotXds)
with open('/tmp/SPOT.XDS_REF', 'w') as f:
f.write(spotXdsReference)
self.assertEqual(
spotXdsReference.split('\n')[0],
spotXds.split('\n')[0])
self.assertEqual(spotXdsReference, spotXds)
def test_generateImageLinks_3(self):
referenceDataPath = self.dataPath / 'id30a1_1_fast_char.json'
inData = UtilsTest.loadAndSubstitueTestData(referenceDataPath)
imageLinks = XDSTask.generateImageLinks(inData)
pprint.pprint(imageLinks)
def test_generateImageLinks_3(self):
referenceDataPath = self.dataPath / 'inDataXDSGenerateBackground_eiger16m.json'
inData = UtilsTest.loadAndSubstitueTestData(referenceDataPath)
imageLinks = XDSTask.generateImageLinks(inData)
pprint.pprint(imageLinks)
def test_generateXDS_INP(self):
referenceDataPath = self.dataPath / 'inDataXDSIndexing.json'
inData = UtilsTest.loadAndSubstitueTestData(referenceDataPath)
listXDS_INP = XDSTask.generateXDS_INP(inData)
pprint.pprint(listXDS_INP)