# Copyright (C) 2012,2013 # Max Planck Institute for Polymer Research # Copyright (C) 2008,2009,2010,2011 # Max-Planck-Institute for Polymer Research & Fraunhofer SCAI # # This file is part of ESPResSo++. # # ESPResSo++ is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation, either version 3 of the License, or # (at your option) any later version. # # ESPResSo++ is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU General Public License for more details. # # You should have received a copy of the GNU General Public License # along with this program. If not, see <http://www.gnu.org/licenses/>. from espressopp.esutil import pmiimport pmiimport('espressopp.bc') from espressopp.bc.BC import * from espressopp.bc.OrthorhombicBC import * from espressopp.bc.SlabBC import * from espressopp.bc.OpenBC import *
# ESPResSo++ is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation, either version 3 of the License, or # (at your option) any later version. # # ESPResSo++ is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU General Public License for more details. # # You should have received a copy of the GNU General Public License # along with this program. If not, see <http://www.gnu.org/licenses/>. # -*- coding: iso-8859-1 -*- from espressopp.esutil import pmiimport pmiimport('espressopp.interaction') from espressopp.interaction.Interaction import * from espressopp.interaction.Potential import * from espressopp.interaction.PotentialVSpherePair import * from espressopp.interaction.LennardJonesGPU import * from espressopp.interaction.Zero import * from espressopp.interaction.LennardJones import * from espressopp.interaction.LennardJonesAutoBonds import * from espressopp.interaction.LennardJonesCapped import * from espressopp.interaction.LennardJonesEnergyCapped import * from espressopp.interaction.LennardJonesExpand import * from espressopp.interaction.LennardJonesGromacs import * from espressopp.interaction.LennardJonesSoftcoreTI import *
# it under the terms of the GNU General Public License as published by # the Free Software Foundation, either version 3 of the License, or # (at your option) any later version. # # ESPResSo++ is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU General Public License for more details. # # You should have received a copy of the GNU General Public License # along with this program. If not, see <http://www.gnu.org/licenses/>. # -*- coding: iso-8859-1 -*- from espressopp.esutil import pmiimport pmiimport('espressopp.interaction') from espressopp.interaction.Interaction import * from espressopp.interaction.Potential import * from espressopp.interaction.PotentialVSpherePair import * from espressopp.interaction.PotentialUniqueDist import * from espressopp.interaction.Zero import * from espressopp.interaction.LennardJones import * from espressopp.interaction.LennardJonesAutoBonds import * from espressopp.interaction.LennardJonesCapped import * from espressopp.interaction.LennardJonesEnergyCapped import * from espressopp.interaction.LennardJonesExpand import * from espressopp.interaction.LennardJonesGromacs import * from espressopp.interaction.LennardJonesSoftcoreTI import *
# ESPResSo++ is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation, either version 3 of the License, or # (at your option) any later version. # # ESPResSo++ is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU General Public License for more details. # # You should have received a copy of the GNU General Public License # along with this program. If not, see <http://www.gnu.org/licenses/>. from espressopp.esutil import pmiimport pmiimport('espressopp.integrator') from espressopp.integrator.MDIntegrator import * from espressopp.integrator.VelocityVerlet import * from espressopp.integrator.VelocityVerletOnGroup import * from espressopp.integrator.Isokinetic import * from espressopp.integrator.StochasticVelocityRescaling import * from espressopp.integrator.TDforce import * from espressopp.integrator.FreeEnergyCompensation import * from espressopp.integrator.OnTheFlyFEC import * from espressopp.integrator.Extension import * from espressopp.integrator.Adress import * from espressopp.integrator.BerendsenBarostat import * from espressopp.integrator.BerendsenBarostatAnisotropic import * from espressopp.integrator.BerendsenThermostat import *
# Copyright (C) 2012,2013 # Max Planck Institute for Polymer Research # Copyright (C) 2008,2009,2010,2011 # Max-Planck-Institute for Polymer Research & Fraunhofer SCAI # # This file is part of ESPResSo++. # # ESPResSo++ is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation, either version 3 of the License, or # (at your option) any later version. # # ESPResSo++ is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU General Public License for more details. # # You should have received a copy of the GNU General Public License # along with this program. If not, see <http://www.gnu.org/licenses/>. from espressopp.esutil import pmiimport pmiimport('espressopp.storage') from espressopp.storage.Storage import * from espressopp.storage.DomainDecomposition import * from espressopp.storage.DomainDecompositionNonBlocking import * from espressopp.storage.DomainDecompositionAdress import *
# # ESPResSo++ is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation, either version 3 of the License, or # (at your option) any later version. # # ESPResSo++ is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU General Public License for more details. # # You should have received a copy of the GNU General Public License # along with this program. If not, see <http://www.gnu.org/licenses/>. from espressopp.esutil import pmiimport pmiimport('espressopp.io') from espressopp.io.DumpGRO import * from espressopp.io.DumpGROAdress import * from espressopp.io.DumpXYZ import * try: from espressopp.io.DumpXTC import * from espressopp.io.DumpXTCAdress import * except ImportError: pass from espressopp.io.DumpH5MD import * from espressopp.io.DumpH5MDParallel import * from espressopp.io.DumpTopology import *
# Copyright (C) 2012,2013 # Max Planck Institute for Polymer Research # Copyright (C) 2008,2009,2010,2011 # Max-Planck-Institute for Polymer Research & Fraunhofer SCAI # # This file is part of ESPResSo++. # # ESPResSo++ is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation, either version 3 of the License, or # (at your option) any later version. # # ESPResSo++ is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU General Public License for more details. # # You should have received a copy of the GNU General Public License # along with this program. If not, see <http://www.gnu.org/licenses/>. from espressopp.esutil import pmiimport pmiimport('espressopp.io') from espressopp.io.DumpXYZ import * from espressopp.io.DumpGRO import * from espressopp.io.DumpGROAdress import *
# Copyright (C) 2012,2013 # Max Planck Institute for Polymer Research # Copyright (C) 2008,2009,2010,2011 # Max-Planck-Institute for Polymer Research & Fraunhofer SCAI # # This file is part of ESPResSo++. # # ESPResSo++ is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation, either version 3 of the License, or # (at your option) any later version. # # ESPResSo++ is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU General Public License for more details. # # You should have received a copy of the GNU General Public License # along with this program. If not, see <http://www.gnu.org/licenses/>. from espressopp.esutil import pmiimport pmiimport('espressopp.bc') from espressopp.bc.BC import * from espressopp.bc.OrthorhombicBC import * from espressopp.bc.SlabBC import *
# Copyright (C) 2019-2020 # Max Planck Institute for Polymer Research & JGU Mainz # # This file is part of ESPResSo++. # # ESPResSo++ is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation, either version 3 of the License, or # (at your option) any later version. # # ESPResSo++ is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU General Public License for more details. # # You should have received a copy of the GNU General Public License # along with this program. If not, see <http://www.gnu.org/licenses/>. from espressopp.esutil import pmiimport pmiimport('espressopp.vectorization') from espressopp.vectorization.Vectorization import * from espressopp.vectorization.VerletList import * from espressopp.vectorization.interaction import *
# ESPResSo++ is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation, either version 3 of the License, or # (at your option) any later version. # # ESPResSo++ is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU General Public License for more details. # # You should have received a copy of the GNU General Public License # along with this program. If not, see <http://www.gnu.org/licenses/>. from espressopp.esutil import pmiimport pmiimport('espressopp.analysis') from espressopp.analysis.Observable import * from espressopp.analysis.AnalysisBase import * from espressopp.analysis.Temperature import * from espressopp.analysis.Pressure import * from espressopp.analysis.PressureTensor import * from espressopp.analysis.PressureTensorLayer import * from espressopp.analysis.PressureTensorMultiLayer import * from espressopp.analysis.Configurations import * from espressopp.analysis.ConfigurationsExt import * from espressopp.analysis.ConfigurationsExtAdress import * from espressopp.analysis.Velocities import * from espressopp.analysis.CenterOfMass import * from espressopp.analysis.NPart import * from espressopp.analysis.MaxPID import *
# it under the terms of the GNU General Public License as published by # the Free Software Foundation, either version 3 of the License, or # (at your option) any later version. # # ESPResSo++ is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU General Public License for more details. # # You should have received a copy of the GNU General Public License # along with this program. If not, see <http://www.gnu.org/licenses/>. from espressopp.esutil import pmiimport pmiimport("espressopp.analysis") from espressopp.analysis.Observable import * from espressopp.analysis.AnalysisBase import * from espressopp.analysis.Temperature import * from espressopp.analysis.Pressure import * from espressopp.analysis.PressureTensor import * from espressopp.analysis.PressureTensorLayer import * from espressopp.analysis.PressureTensorMultiLayer import * from espressopp.analysis.Configurations import * from espressopp.analysis.ConfigurationsExt import * from espressopp.analysis.ConfigurationsExtAdress import * from espressopp.analysis.Velocities import * from espressopp.analysis.CenterOfMass import * from espressopp.analysis.NPart import * from espressopp.analysis.MaxPID import *
# Copyright (C) 2012,2013 # Max Planck Institute for Polymer Research # Copyright (C) 2008,2009,2010,2011 # Max-Planck-Institute for Polymer Research & Fraunhofer SCAI # # This file is part of ESPResSo++. # # ESPResSo++ is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation, either version 3 of the License, or # (at your option) any later version. # # ESPResSo++ is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU General Public License for more details. # # You should have received a copy of the GNU General Public License # along with this program. If not, see <http://www.gnu.org/licenses/>. from espressopp.esutil import pmiimport pmiimport('espressopp.soap') from espressopp.soap.Descriptor import * from espressopp.soap.Soap import * from espressopp.soap.Portal import * from espressopp.soap.Spectrum import *
# # ESPResSo++ is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation, either version 3 of the License, or # (at your option) any later version. # # ESPResSo++ is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU General Public License for more details. # # You should have received a copy of the GNU General Public License # along with this program. If not, see <http://www.gnu.org/licenses/>. from espressopp.esutil import pmiimport pmiimport('espressopp.analysis') from espressopp.analysis.Observable import * from espressopp.analysis.AnalysisBase import * from espressopp.analysis.Temperature import * from espressopp.analysis.Pressure import * from espressopp.analysis.PressureTensor import * from espressopp.analysis.PressureTensorLayer import * from espressopp.analysis.PressureTensorMultiLayer import * from espressopp.analysis.Configurations import * from espressopp.analysis.ConfigurationsExt import * from espressopp.analysis.ConfigurationsExtAdress import * from espressopp.analysis.Velocities import * from espressopp.analysis.CenterOfMass import * from espressopp.analysis.NPart import * from espressopp.analysis.MaxPID import *
# the Free Software Foundation, either version 3 of the License, or # (at your option) any later version. # # ESPResSo++ is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU General Public License for more details. # # You should have received a copy of the GNU General Public License # along with this program. If not, see <http://www.gnu.org/licenses/>. # -*- coding: iso-8859-1 -*- from espressopp.esutil import pmiimport pmiimport("espressopp.interaction") from espressopp.interaction.Interaction import * from espressopp.interaction.Potential import * from espressopp.interaction.PotentialVSpherePair import * from espressopp.interaction.PotentialUniqueDist import * from espressopp.interaction.Zero import * from espressopp.interaction.LennardJones import * from espressopp.interaction.LennardJonesAutoBonds import * from espressopp.interaction.LennardJonesCapped import * from espressopp.interaction.LennardJonesEnergyCapped import * from espressopp.interaction.LennardJonesExpand import * from espressopp.interaction.LennardJonesGromacs import * from espressopp.interaction.LennardJonesSoftcoreTI import *
# # ESPResSo++ is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation, either version 3 of the License, or # (at your option) any later version. # # ESPResSo++ is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU General Public License for more details. # # You should have received a copy of the GNU General Public License # along with this program. If not, see <http://www.gnu.org/licenses/>. from espressopp.esutil import pmiimport pmiimport('espressopp.integrator') from espressopp.integrator.MDIntegrator import * from espressopp.integrator.VelocityVerlet import * try: from espressopp.integrator.PIAdressIntegrator import * except: print 'Warning: numpy module not available. Therefore, espressopp.integrator.PIAdressIntegrator unavailable.' from espressopp.integrator.VelocityVerletOnGroup import * from espressopp.integrator.VelocityVerletRESPA import * from espressopp.integrator.Isokinetic import * from espressopp.integrator.StochasticVelocityRescaling import * from espressopp.integrator.TDforce import * from espressopp.integrator.FreeEnergyCompensation import * from espressopp.integrator.OnTheFlyFEC import *
# Copyright (C) 2019-2020 # Max Planck Institute for Polymer Research & JGU Mainz # # This file is part of ESPResSo++. # # ESPResSo++ is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation, either version 3 of the License, or # (at your option) any later version. # # ESPResSo++ is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU General Public License for more details. # # You should have received a copy of the GNU General Public License # along with this program. If not, see <http://www.gnu.org/licenses/>. from espressopp.esutil import pmiimport pmiimport('espressopp.vectorization.interaction') from espressopp.vectorization.interaction.LennardJones import *