def test_get_from_uri_with_cache(self, kg_client):
assert len(kg_client.cache) == 0
assert kg_client._nexus_client._http_client.request_count == 0
uri = "https://nexus.humanbrainproject.org/v0/data/neuralactivity/experiment/patchedcell/v0.1.0/5ab24291-8dca-4a45-a484-8a8c28d396e2"
# 1st call
cell1 = PatchedCell.from_uri(uri, kg_client, api="nexus")
assert len(kg_client.cache) == 1
assert kg_client._nexus_client._http_client.request_count == 1
assert uri in kg_client.cache
# 2nd call
cell2 = PatchedCell.from_uri(uri, kg_client, api="nexus")
assert kg_client._nexus_client._http_client.request_count == 1 # should be unchanged if cache was used
# 3rd call, without cache
cell3 = PatchedCell.from_uri(uri, kg_client, use_cache=False, api="nexus")
assert kg_client._nexus_client._http_client.request_count == 2
assert cell1.id == cell2.id == cell3.id == uri
def test_get_from_uuid(self, kg_client):
uri = "https://nexus.humanbrainproject.org/v0/data/neuralactivity/experiment/patchedcell/v0.1.0/5ab24291-8dca-4a45-a484-8a8c28d396e2"
a = PatchedCell.from_uri(uri, kg_client, api="nexus")
b = PatchedCell.from_uuid("5ab24291-8dca-4a45-a484-8a8c28d396e2",
kg_client,
api="nexus")
assert a == b
assert a.id == uri
def test_get_from_uri_kgquery_simple(self, kg_client): # TODO: UPDATE STORED QUERY
uri = "https://nexus.humanbrainproject.org/v0/data/neuralactivity/experiment/patchedcell/v0.1.0/b813a2f7-5e87-4827-81cd-0008da041648"
cell = PatchedCell.from_uri(uri, kg_client, api="query", resolved=False)
assert isinstance(cell, PatchedCell)
assert cell.brain_location == [BrainRegion('5th cerebellar lobule'),
BrainRegion('6th cerebellar lobule'),
BrainRegion('7th cerebellar lobule'),
BrainRegion('8th cerebellar lobule')]
assert isinstance(cell.collection, KGQuery)
assert isinstance(cell.experiments, KGQuery)
def test_get_from_uri_nexus(self, kg_client):
uri = "https://nexus.humanbrainproject.org/v0/data/neuralactivity/experiment/patchedcell/v0.1.0/5ab24291-8dca-4a45-a484-8a8c28d396e2"
cell = PatchedCell.from_uri(uri, kg_client, api="nexus")
assert isinstance(cell, PatchedCell)
assert cell.id == uri
assert cell.brain_location == [BrainRegion('lobule 5 of the cerebellar vermis'),
BrainRegion('lobule 6 of the cerebellar vermis'),
BrainRegion('lobule 7 of the cerebellar vermis'),
BrainRegion('lobule 8 of the cerebellar vermis')]
assert isinstance(cell.collection, KGQuery)
assert isinstance(cell.experiments, KGQuery)
