def main():
args=parse_arguments()
#fdir="/home1/02105/msandan/data/task001_run001.feat"
#fdir='/corral-repl/utexas/poldracklab/openfmri/shared2/ds006A/sub001/model/model001/task001_run001.feat'
#fdir='/Users/poldrack/data/fmriqa_data/task001_run001.feat'
featdir=Featdir(args.featdir,args.verbose)
featdir.run_all_checks()
print ''
if len(featdir.warnings)>0:
print "Warnings:"
for w in featdir.warnings:
print w
else:
print "Successfully completed - No warnings"
featdirs=glob.glob('sub*/model/model%03d/*.feat'%modelnum)
good_data={}
subs=[]
for f in featdirs:
subcode=f.split('/')[0]
if not subcode in subs:
subs.append(subcode)
print 'processing',subcode
print 'checking %s'%f
taskname,runname=os.path.basename(f).replace('.feat','').split('_')
tasknum=int(taskname.replace('task',''))
runnum=int(runname.replace('run',''))
#print f,tasknum,runnum
try:
featdir=Featdir(f)
except:
print 'LOAD ERROR: %s'%f
continue
featdir.run_all_checks()
warnings=[]
for w in featdir.warnings:
keep_warning=True
for e in exclude_warnings:
if w.find(e)>-1:
keep_warning=False
if keep_warning:
warnings.append(w)
if not len(warnings)==0:
print 'PROBLEM: with %s'%f
# for w in warnings:
featdirs = glob.glob('sub*/model/model%03d/*.feat' % modelnum)
good_data = {}
subs = []
for f in featdirs:
subcode = f.split('/')[0]
if not subcode in subs:
subs.append(subcode)
print 'processing', subcode
print 'checking %s' % f
taskname, runname = os.path.basename(f).replace('.feat', '').split('_')
tasknum = int(taskname.replace('task', ''))
runnum = int(runname.replace('run', ''))
#print f,tasknum,runnum
try:
featdir = Featdir(f)
except:
print 'LOAD ERROR: %s' % f
continue
featdir.run_all_checks()
warnings = []
for w in featdir.warnings:
keep_warning = True
for e in exclude_warnings:
if w.find(e) > -1:
keep_warning = False
if keep_warning:
warnings.append(w)
if not len(warnings) == 0:
print 'PROBLEM: with %s' % f
# for w in warnings:
