def test_import_fhir_store_gcs(test_dataset, capsys):
fhir_stores.create_fhir_store(service_account_json, project_id,
cloud_region, dataset_id, fhir_store_id)
storage_client = storage.Client()
bucket = storage_client.get_bucket(gcs_uri)
blob = bucket.blob(source_file_name)
blob.upload_from_filename(resource_file)
time.sleep(10) # Give new blob time to propagate
fhir_stores.import_fhir_resources(
service_account_json,
project_id,
cloud_region,
dataset_id,
fhir_store_id,
import_object,
)
# Clean up
try:
blob.delete()
# If blob not found, then it's already been deleted, so no need to clean up.
except exceptions.NotFound:
pass
fhir_stores.delete_fhir_store(service_account_json, project_id,
cloud_region, dataset_id, fhir_store_id)
out, _ = capsys.readouterr()
assert "Imported FHIR resources" in out
def test_import_fhir_store_gcs(test_dataset, test_fhir_store, blob, capsys):
fhir_stores.import_fhir_resources(
project_id, cloud_region, dataset_id, fhir_store_id, import_object,
)
out, _ = capsys.readouterr()
assert "Imported FHIR resources" in out
def test_import_fhir_store_gcs(test_dataset, capsys):
fhir_stores.create_fhir_store(service_account_json, project_id,
cloud_region, dataset_id, fhir_store_id)
storage_client = storage.Client()
bucket = storage_client.get_bucket(gcs_uri)
blob = bucket.blob(source_file_name)
blob.upload_from_filename(resource_file)
time.sleep(10) # Give new blob time to propagate
fhir_stores.import_fhir_resources(
service_account_json,
project_id,
cloud_region,
dataset_id,
fhir_store_id,
import_object,
)
# Clean up
blob.delete()
fhir_stores.delete_fhir_store(service_account_json, project_id,
cloud_region, dataset_id, fhir_store_id)
out, _ = capsys.readouterr()
assert "Imported FHIR resources" in out
def test_import_fhir_store_gcs(test_dataset, test_fhir_store, test_blob,
capsys):
time.sleep(10) # Give new blob time to propagate
fhir_stores.import_fhir_resources(
service_account_json,
project_id,
cloud_region,
dataset_id,
test_fhir_store_id,
import_object,
)
out, _ = capsys.readouterr()
assert "Imported FHIR resources" in out