def render(self, **kwargs):
self.color_domain = [self.vmin + (self.vmax-self.vmin)*i/499. for i in range(500)]
self.color_range = [self.__call__(x) for x in self.color_domain]
self.tick_labels = legend_scaler(self.index)
super(ColorMap, self).render(**kwargs)
figure = self.get_root()
assert isinstance(figure, Figure), ("You cannot render this Element "
"if it's not in a Figure.")
figure.header.add_children(JavascriptLink("https://cdnjs.cloudflare.com/ajax/libs/d3/3.5.5/d3.min.js"), name='d3') # noqa
def render(self, **kwargs):
self.color_domain = [
self.vmin + (self.vmax - self.vmin) * i / 499. for i in range(500)
]
self.color_range = [self.__call__(x) for x in self.color_domain]
self.tick_labels = legend_scaler(self.index)
super(ColorMap, self).render(**kwargs)
figure = self.get_root()
assert isinstance(figure, Figure), ("You cannot render this Element "
"if it's not in a Figure.")
figure.header.add_children(JavascriptLink(
"https://cdnjs.cloudflare.com/ajax/libs/d3/3.5.5/d3.min.js"),
name='d3') # noqa
def geo_json(self, geo_path=None, geo_str=None, data_out='data.json',
data=None, columns=None, key_on=None, threshold_scale=None,
fill_color='blue', fill_opacity=0.6, line_color='black',
line_weight=1, line_opacity=1, legend_name=None,
topojson=None, reset=False):
'''Apply a GeoJSON overlay to the map.
Plot a GeoJSON overlay on the base map. There is no requirement
to bind data (passing just a GeoJSON plots a single-color overlay),
but there is a data binding option to map your columnar data to
different feature objects with a color scale.
If data is passed as a Pandas dataframe, the "columns" and "key-on"
keywords must be included, the first to indicate which DataFrame
columns to use, the second to indicate the layer in the GeoJSON
on which to key the data. The 'columns' keyword does not need to be
passed for a Pandas series.
Colors are generated from color brewer (http://colorbrewer2.org/)
sequential palettes on a D3 threshold scale. The scale defaults to the
following quantiles: [0, 0.5, 0.75, 0.85, 0.9]. A custom scale can be
passed to `threshold_scale` of length <=6, in order to match the
color brewer range.
TopoJSONs can be passed as "geo_path", but the "topojson" keyword must
also be passed with the reference to the topojson objects to convert.
See the topojson.feature method in the TopoJSON API reference:
https://github.com/mbostock/topojson/wiki/API-Reference
Parameters
----------
geo_path: string, default None
URL or File path to your GeoJSON data
geo_str: string, default None
String of GeoJSON, alternative to geo_path
data_out: string, default 'data.json'
Path to write Pandas DataFrame/Series to JSON if binding data
data: Pandas DataFrame or Series, default None
Data to bind to the GeoJSON.
columns: dict or tuple, default None
If the data is a Pandas DataFrame, the columns of data to be bound.
Must pass column 1 as the key, and column 2 the values.
key_on: string, default None
Variable in the GeoJSON file to bind the data to. Must always
start with 'feature' and be in JavaScript objection notation.
Ex: 'feature.id' or 'feature.properties.statename'.
threshold_scale: list, default None
Data range for D3 threshold scale. Defaults to the following range
of quantiles: [0, 0.5, 0.75, 0.85, 0.9], rounded to the nearest
order-of-magnitude integer. Ex: 270 rounds to 200, 5600 to 6000.
fill_color: string, default 'blue'
Area fill color. Can pass a hex code, color name, or if you are
binding data, one of the following color brewer palettes:
'BuGn', 'BuPu', 'GnBu', 'OrRd', 'PuBu', 'PuBuGn', 'PuRd', 'RdPu',
'YlGn', 'YlGnBu', 'YlOrBr', and 'YlOrRd'.
fill_opacity: float, default 0.6
Area fill opacity, range 0-1.
line_color: string, default 'black'
GeoJSON geopath line color.
line_weight: int, default 1
GeoJSON geopath line weight.
line_opacity: float, default 1
GeoJSON geopath line opacity, range 0-1.
legend_name: string, default None
Title for data legend. If not passed, defaults to columns[1].
topojson: string, default None
If using a TopoJSON, passing "objects.yourfeature" to the topojson
keyword argument will enable conversion to GeoJSON.
reset: boolean, default False
Remove all current geoJSON layers, start with new layer
Output
------
GeoJSON data layer in obj.template_vars
Example
-------
>>>map.geo_json(geo_path='us-states.json', line_color='blue',
line_weight=3)
>>>map.geo_json(geo_path='geo.json', data=df,
columns=['Data 1', 'Data 2'],
key_on='feature.properties.myvalue', fill_color='PuBu',
threshold_scale=[0, 20, 30, 40, 50, 60])
>>>map.geo_json(geo_path='countries.json', topojson='objects.countries')
'''
if reset:
reset_vars = ['json_paths', 'func_vars', 'color_scales',
'geo_styles', 'gjson_layers', 'map_legends',
'topo_convert']
for var in reset_vars:
self.template_vars.update({var: []})
self.mark_cnt['geojson'] = 1
def json_style(style_cnt, line_color, line_weight, line_opacity,
fill_color, fill_opacity, quant_fill):
'''Generate JSON styling function from template'''
style_temp = self.env.get_template('geojson_style.js')
style = style_temp.render({'style': style_cnt,
'line_color': line_color,
'line_weight': line_weight,
'line_opacity': line_opacity,
'fill_color': fill_color,
'fill_opacity': fill_opacity,
'quantize_fill': quant_fill})
return style
#Set map type to geojson
self.map_type = 'geojson'
#Get JSON map layer template pieces, convert TopoJSON if necessary
# geo_str is really a hack
if geo_path:
geo_path = ".defer(d3.json, '{0}')".format(geo_path)
elif geo_str:
geo_path = (".defer(function(callback)"
"{{callback(null, JSON.parse('{}'))}})").format(geo_str)
if topojson is None:
map_var = '_'.join(['gjson', str(self.mark_cnt['geojson'])])
layer_var = map_var
else:
map_var = '_'.join(['tjson', str(self.mark_cnt['geojson'])])
topo_obj = '.'.join([map_var, topojson])
layer_var = '_'.join(['topo', str(self.mark_cnt['geojson'])])
topo_templ = self.env.get_template('topo_func.js')
topo_func = topo_templ.render({'map_var': layer_var,
't_var': map_var,
't_var_obj': topo_obj})
topo_lib = self.env.get_template('topojson_ref.txt').render()
self.template_vars.update({'topojson': topo_lib})
self.template_vars.setdefault('topo_convert',
[]).append(topo_func)
style_count = '_'.join(['style', str(self.mark_cnt['geojson'])])
#Get Data binding pieces if available
if data is not None:
import pandas as pd
#Create DataFrame with only the relevant columns
if isinstance(data, pd.DataFrame):
data = pd.concat([data[columns[0]], data[columns[1]]], axis=1)
#Save data to JSON
self.json_data[data_out] = utilities.transform_data(data)
#Add data to queue
d_path = ".defer(d3.json, '{0}')".format(data_out)
self.template_vars.setdefault('json_paths', []).append(d_path)
#Add data variable to makeMap function
data_var = '_'.join(['data', str(self.mark_cnt['geojson'])])
self.template_vars.setdefault('func_vars', []).append(data_var)
#D3 Color scale
series = data[columns[1]]
if threshold_scale and len(threshold_scale) > 6:
raise ValueError
domain = threshold_scale or utilities.split_six(series=series)
if len(domain) > 253:
raise ValueError('The threshold scale must be of length <= 253')
if not utilities.color_brewer(fill_color):
raise ValueError('Please pass a valid color brewer code to '
'fill_local. See docstring for valid codes.')
palette = utilities.color_brewer(fill_color, len(domain))
d3range = palette[0: len(domain) + 1]
tick_labels = utilities.legend_scaler(domain)
color_temp = self.env.get_template('d3_threshold.js')
d3scale = color_temp.render({'domain': domain,
'range': d3range})
self.template_vars.setdefault('color_scales', []).append(d3scale)
#Create legend
name = legend_name or columns[1]
leg_templ = self.env.get_template('d3_map_legend.js')
legend = leg_templ.render({'lin_max': int(domain[-1]*1.1),
'tick_labels': tick_labels,
'caption': name})
self.template_vars.setdefault('map_legends', []).append(legend)
#Style with color brewer colors
matchColor = 'color(matchKey({0}, {1}))'.format(key_on, data_var)
style = json_style(style_count, line_color, line_weight,
line_opacity, None, fill_opacity, matchColor)
else:
style = json_style(style_count, line_color, line_weight,
line_opacity, fill_color, fill_opacity, None)
layer = ('gJson_layer_{0} = L.geoJson({1}, {{style: {2}}}).addTo(map)'
.format(self.mark_cnt['geojson'], layer_var, style_count))
self.template_vars.setdefault('json_paths', []).append(geo_path)
self.template_vars.setdefault('func_vars', []).append(map_var)
self.template_vars.setdefault('geo_styles', []).append(style)
self.template_vars.setdefault('gjson_layers', []).append(layer)
def geo_json(self, geo_path=None, geo_str=None, data_out='data.json',
data=None, columns=None, key_on=None, threshold_scale=None,
fill_color='blue', fill_opacity=0.6, line_color='black',
line_weight=1, line_opacity=1, legend_name=None,
topojson=None, reset=False):
"""Apply a GeoJSON overlay to the map.
Plot a GeoJSON overlay on the base map. There is no requirement
to bind data (passing just a GeoJSON plots a single-color overlay),
but there is a data binding option to map your columnar data to
different feature objects with a color scale.
If data is passed as a Pandas dataframe, the "columns" and "key-on"
keywords must be included, the first to indicate which DataFrame
columns to use, the second to indicate the layer in the GeoJSON
on which to key the data. The 'columns' keyword does not need to be
passed for a Pandas series.
Colors are generated from color brewer (http://colorbrewer2.org/)
sequential palettes on a D3 threshold scale. The scale defaults to the
following quantiles: [0, 0.5, 0.75, 0.85, 0.9]. A custom scale can be
passed to `threshold_scale` of length <=6, in order to match the
color brewer range.
TopoJSONs can be passed as "geo_path", but the "topojson" keyword must
also be passed with the reference to the topojson objects to convert.
See the topojson.feature method in the TopoJSON API reference:
https://github.com/mbostock/topojson/wiki/API-Reference
Parameters
----------
geo_path: string, default None
URL or File path to your GeoJSON data
geo_str: string, default None
String of GeoJSON, alternative to geo_path
data_out: string, default 'data.json'
Path to write Pandas DataFrame/Series to JSON if binding data
data: Pandas DataFrame or Series, default None
Data to bind to the GeoJSON.
columns: dict or tuple, default None
If the data is a Pandas DataFrame, the columns of data to be bound.
Must pass column 1 as the key, and column 2 the values.
key_on: string, default None
Variable in the GeoJSON file to bind the data to. Must always
start with 'feature' and be in JavaScript objection notation.
Ex: 'feature.id' or 'feature.properties.statename'.
threshold_scale: list, default None
Data range for D3 threshold scale. Defaults to the following range
of quantiles: [0, 0.5, 0.75, 0.85, 0.9], rounded to the nearest
order-of-magnitude integer. Ex: 270 rounds to 200, 5600 to 6000.
fill_color: string, default 'blue'
Area fill color. Can pass a hex code, color name, or if you are
binding data, one of the following color brewer palettes:
'BuGn', 'BuPu', 'GnBu', 'OrRd', 'PuBu', 'PuBuGn', 'PuRd', 'RdPu',
'YlGn', 'YlGnBu', 'YlOrBr', and 'YlOrRd'.
fill_opacity: float, default 0.6
Area fill opacity, range 0-1.
line_color: string, default 'black'
GeoJSON geopath line color.
line_weight: int, default 1
GeoJSON geopath line weight.
line_opacity: float, default 1
GeoJSON geopath line opacity, range 0-1.
legend_name: string, default None
Title for data legend. If not passed, defaults to columns[1].
topojson: string, default None
If using a TopoJSON, passing "objects.yourfeature" to the topojson
keyword argument will enable conversion to GeoJSON.
reset: boolean, default False
Remove all current geoJSON layers, start with new layer
Output
------
GeoJSON data layer in obj.template_vars
Example
-------
>>> m.geo_json(geo_path='us-states.json', line_color='blue',
line_weight=3)
>>> m.geo_json(geo_path='geo.json', data=df,
columns=['Data 1', 'Data 2'],
key_on='feature.properties.myvalue', fill_color='PuBu',
threshold_scale=[0, 20, 30, 40, 50, 60])
>>> m.geo_json(geo_path='countries.json', topojson='objects.countries')
"""
if reset:
reset_vars = ['json_paths', 'func_vars', 'color_scales',
'geo_styles', 'gjson_layers', 'map_legends',
'topo_convert']
for var in reset_vars:
self.template_vars.update({var: []})
self.mark_cnt['geojson'] = 1
def json_style(style_cnt, line_color, line_weight, line_opacity,
fill_color, fill_opacity, quant_fill):
"""Generate JSON styling function from template"""
style_temp = self.env.get_template('geojson_style.js')
style = style_temp.render({'style': style_cnt,
'line_color': line_color,
'line_weight': line_weight,
'line_opacity': line_opacity,
'fill_color': fill_color,
'fill_opacity': fill_opacity,
'quantize_fill': quant_fill})
return style
# Set map type to geojson.
self.map_type = 'geojson'
# Get JSON map layer template pieces, convert TopoJSON if necessary.
# geo_str is really a hack.
if geo_path:
geo_path = ".defer(d3.json, '{0}')".format(geo_path)
elif geo_str:
fmt = (".defer(function(callback)"
"{{callback(null, JSON.parse('{}'))}})").format
geo_path = fmt(geo_str)
if topojson is None:
map_var = '_'.join(['gjson', str(self.mark_cnt['geojson'])])
layer_var = map_var
else:
map_var = '_'.join(['tjson', str(self.mark_cnt['geojson'])])
topo_obj = '.'.join([map_var, topojson])
layer_var = '_'.join(['topo', str(self.mark_cnt['geojson'])])
topo_templ = self.env.get_template('topo_func.js')
topo_func = topo_templ.render({'map_var': layer_var,
't_var': map_var,
't_var_obj': topo_obj})
topo_lib = self.env.get_template('topojson_ref.txt').render()
self.template_vars.update({'topojson': topo_lib})
self.template_vars.setdefault('topo_convert',
[]).append(topo_func)
style_count = '_'.join(['style', str(self.mark_cnt['geojson'])])
# Get Data binding pieces if available.
if data is not None:
import pandas as pd
# Create DataFrame with only the relevant columns.
if isinstance(data, pd.DataFrame):
data = pd.concat([data[columns[0]], data[columns[1]]], axis=1)
# Save data to JSON.
self.json_data[data_out] = utilities.transform_data(data)
# Add data to queue.
d_path = ".defer(d3.json, '{0}')".format(data_out)
self.template_vars.setdefault('json_paths', []).append(d_path)
# Add data variable to makeMap function.
data_var = '_'.join(['data', str(self.mark_cnt['geojson'])])
self.template_vars.setdefault('func_vars', []).append(data_var)
# D3 Color scale.
series = data[columns[1]]
if threshold_scale and len(threshold_scale) > 6:
raise ValueError
domain = threshold_scale or utilities.split_six(series=series)
if len(domain) > 253:
raise ValueError('The threshold scale must be length <= 253')
if not utilities.color_brewer(fill_color):
raise ValueError('Please pass a valid color brewer code to '
'fill_local. See docstring for valid codes.')
palette = utilities.color_brewer(fill_color, len(domain))
d3range = palette[0: len(domain) + 1]
tick_labels = utilities.legend_scaler(domain)
color_temp = self.env.get_template('d3_threshold.js')
d3scale = color_temp.render({'domain': domain,
'range': d3range})
self.template_vars.setdefault('color_scales', []).append(d3scale)
# Create legend.
name = legend_name or columns[1]
leg_templ = self.env.get_template('d3_map_legend.js')
legend = leg_templ.render({'lin_max': int(domain[-1]*1.1),
'tick_labels': tick_labels,
'caption': name})
self.template_vars.setdefault('map_legends', []).append(legend)
# Style with color brewer colors.
matchColor = 'color(matchKey({0}, {1}))'.format(key_on, data_var)
style = json_style(style_count, line_color, line_weight,
line_opacity, None, fill_opacity, matchColor)
else:
style = json_style(style_count, line_color, line_weight,
line_opacity, fill_color, fill_opacity, None)
layer = ('gJson_layer_{0} = L.geoJson({1}, {{style: {2},'
'onEachFeature: onEachFeature}}).addTo(map)'
.format(self.mark_cnt['geojson'], layer_var, style_count))
self.template_vars.setdefault('json_paths', []).append(geo_path)
self.template_vars.setdefault('func_vars', []).append(map_var)
self.template_vars.setdefault('geo_styles', []).append(style)
self.template_vars.setdefault('gjson_layers', []).append(layer)