def main():
name = "njhcpp"
libs = "boost_filesystem:1_68_0,pstreams:RELEASE_1_0_1,jsoncpp:1.8.3,cppitertools:v0.2.1,zlib:1.2.11"
args = genHelper.parseNjhConfigureArgs()
if Utils.isMac():
cmd = genHelper.mkConfigCmd(name, libs, sys.argv, "-lpthread,-lz")
else:
cmd = genHelper.mkConfigCmd(name, libs, sys.argv, "-lpthread,-lz,-lrt")
Utils.run(cmd)
def main():
name = "njhseq"
#libs = "bamtools:develop,bibcpp:develop,armadillo:8.200.0"
libs = "TwoBit:v2.0.9,bamtools:v2.5.2"
args = genHelper.parseNjhConfigureArgs()
if Utils.isMac():
macv, _, _ = platform.mac_ver()
macv = float('.'.join(macv.split('.')[:2]))
if macv < 10.12:
if args.CC and "gcc" in args.CC[0]:
pass
else:
libs = libs + ",sharedMutex:develop"
cmd = genHelper.mkConfigCmd(name, libs, sys.argv)
Utils.run(cmd)
def main():
name = "gtkExperimental"
libs = "gtkmm,bibcppdev"
args = genHelper.parseNjhConfigureArgs()
cmd = genHelper.mkConfigCmd(name, libs, sys.argv)
Utils.run(cmd)
def main():
name = "seqServer"
libs = "bibseq:v2.4.0,cppcms:1.0.5"
args = genHelper.parseNjhConfigureArgs()
cmd = genHelper.mkConfigCmd(name, libs, sys.argv)
Utils.run(cmd)
def main():
name = "TwoBit"
libs = "njhcpp:v3.0.1"
args = genHelper.parseNjhConfigureArgs()
cmd = genHelper.mkConfigCmd(name, libs, sys.argv)
Utils.run(cmd)
def main():
name = "SeekDeep"
libs = "seqServer:v1.6.2"
args = genHelper.parseNjhConfigureArgs()
cmd = genHelper.mkConfigCmd(name, libs, sys.argv)
Utils.run(cmd)
def main():
name = "SeekDeep"
libs = "seqServer:v1.5.3"
args = genHelper.parseNjhConfigureArgs()
cmd = genHelper.mkConfigCmd(name, libs, sys.argv)
Utils.run(cmd)
def main():
name = "mongoExp"
libs = "bibcpp:develop,mongocxx:r3.1.0-rc0"
args = genHelper.parseNjhConfigureArgs()
cmd = genHelper.mkConfigCmd(name, libs, sys.argv)
Utils.run(cmd)
def main():
name = "psTestCase"
libs = "bibcppdev"
args = genHelper.parseNjhConfigureArgs()
cmd = genHelper.mkConfigCmd(name, libs, sys.argv)
Utils.run(cmd)
def main():
name = "elucidator"
libs = "hts:1.3.1,seekdeep:v2.6.4"
args = genHelper.parseNjhConfigureArgs()
cmd = genHelper.mkConfigCmd(name, libs, sys.argv)
Utils.run(cmd)
def main():
name = "sharedMutex"
libs = ""
args = genHelper.parseNjhConfigureArgs()
cmd = genHelper.mkConfigCmd(name, libs, sys.argv)
Utils.run(cmd)
def main():
name = "TwoBit"
libs = "cppitertools:v0.1,cppprogutils:v2.0.0"
args = genHelper.parseNjhConfigureArgs()
cmd = genHelper.mkConfigCmd(name, libs, sys.argv)
Utils.run(cmd)
def main():
name = "seqServer"
libs = "njhseq:v2.6.2,restbed:4.6"
args = genHelper.parseNjhConfigureArgs()
cmd = genHelper.mkConfigCmd(name, libs, sys.argv)
Utils.run(cmd)
def main():
name = "sharedMutex"
libs = ""
args = genHelper.parseNjhConfigureArgs()
cmd = genHelper.mkConfigCmd(name, libs, sys.argv)
Utils.run(cmd)
def main():
name = "mongoExp"
libs = "bibcpp:develop,mongocxx:r3.1.0-rc0"
args = genHelper.parseNjhConfigureArgs()
cmd = genHelper.mkConfigCmd(name, libs, sys.argv)
Utils.run(cmd)
def main():
name = "MIPWrangler"
libs = "seekdeep:v3.0.0"
args = genHelper.parseNjhConfigureArgs()
cmd = genHelper.mkConfigCmd(name, libs, sys.argv, private=True)
Utils.run(cmd)