def test_identify_as(self):
for name, monosaccharide in monosaccharides.items():
if name in {"Hex", "Pen", "Oct", "Hep", "Non"}:
continue
pref_name = identity.identify(monosaccharide)
if not (name == pref_name or name in synonyms.monosaccharides[pref_name]):
raise AssertionError(
"{}".format((name, pref_name, synonyms.monosaccharides[pref_name])))
def resolve_generic_name(monosaccharide):
try:
abbrev = identity.identify(monosaccharide)
except identity.IdentifyException:
if monosaccharide.stem[0] == Stem.x:
abbrev = monosaccharide.superclass.name.lower().capitalize()
else:
abbrev = ','.join(s.name.lower().capitalize() for s in monosaccharide.stem)
return abbrev
def test_identify_failure(self):
# Will fail because Hex is blacklisted
self.assertRaises(
identity.IdentifyException, lambda: identity.identify(monosaccharides.Hex))
